Miscanthus floridulus: 136532262
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Entry
136532262 CDS
T10264
Name
(RefSeq) sister chromatid cohesion protein SCC2-like isoform X1
KO
K06672
cohesin loading factor subunit SCC2
Organism
mflo Miscanthus floridulus
Brite
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
136532262
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136532262
NCBI-ProteinID:
XP_066380959
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Position
Unknown
AA seq
1803 aa
AA seq
DB search
MDPGASAGGGGRWAGFERACRLPNTVHSEVLPSLPLPTLPRELGFDALRDDEPLAAPDRP
DMIMQAADIARILADTDVSHLGFTPEDNVDVDPSRCSWLWREVLKHNPDAFKVKAPGPSS
QGPFGGPGYQNQEREKHFEHLTPNTSKARNESAFPQDEIGSHREHFHNELTLDSLASKKP
KVRKKEINNSVSSSAPSIPNSQEVIANFCEVVEDFCGKAEIPDDGDGGDWLSIPLNDVKV
LVNEITSVRSKRILHEVPMDTVTRLLDVIDRQIRCSQGLSIDVKENSDAVDAEPLVFSAL
ESSHAALAIMTHHDMPKQLYREELIERIIDFSRHQITDCMAASNPTFRALYKPAENVANN
GDDDEDDLENGQVSKRRRTATNLSIRKSSNRVSASVYSAVQKLCLILGFLKELLTTVRLS
DSCILQLAKTCFTTFLVDNMELLQLKAIGVICTVFSSYTQHRSYLVDETLHLLRKLQFSK
NAVRTYHLADEDQKQIQMITALLVHLVQFSAIVPDSLKGTVDWATIVDASGDGDYYPIKC
HEVATEACCRFWTDVLQRFTAAKSQDMSETKGIIDNLVQDFLTILNLPEYPAAASILEVL
CVLLLQNAGLKSKDTNARCFAIDLLGGIASRLKRDSVICSEEKLWILQDLTDAGSDGSKI
LKNKCCVCLGGRGINIACNECGRCFHSDCMGAGSQDNLQRDSVCPLCFCKQQLNVLQSYC
QSQIKENGKKTAASASKKSAKPVEVPAVDIVRQILLSYLQEAGPQDDGNLFTRWFYLCIW
NKEDQHSKEIIYYLARLKSKEILRDSGNGLAISRDSAKKICLALGQKNSFCRGFDKILAL
LLVCGCFQILQFNLYVLELIPNAFQASLRENSPVIRAKALRAVSSIVEADPEVLGDKRVQ
SAVEGRFCDSAISVREAALELVGRHIASHPDVGLKYIEKVAERIKDTGVSVRKRAIKIIR
DLCASNPNTDTTHAFVEIISRVNDEESSVQDLVCKTFYELWFEEPTGSHKHLVADGSSVP
MEIAKKTEQIVDMLRKMPNHQPLITIIKRNLTLDFLPQSTKAAGINSSMVASIRKRCEFI
CKRLLERILQVEEGAANEMEIHALPYIVALQAFCIVDPTLCIPVTDPSKFVVTLQPYLNI
QVDNKSAAQLLESIIFVIDAVLPLIRKPPQNVVEELEKDLKHMIVRHSYLTVVHACIKCL
CALSKSAGRGPGLLENLVNIFYKHLSGASSDSQLLGRSLFCLGLLLRYGYQMMLTSENQL
DFPKIIHLLQRKYLLRDDFSLKVRALQTLGYILIAKPEFMLQKDMLKLIETALSSEVDYR
LKIQGLQNLYEYLRDAESQLTAESTAKPPVQCEINGRSEVPVAAGAGDTNICGGIIQLYW
SSILDRCLDTNDQVRQSALKIVEVVLRQGLVHPITCVPHLIVLEMDPLEGNSKLAHHLLM
NMNEKYPSFFESRLGDGLQMSFKFFEIIVGNHKMAANIKSNPIAFVKPGISRIYRLIRSN
RNSRNKFVHSIVRKFESDSRSRSTVSFLVYCAEVLASLPFTCSDEPLYLIYDINRVIHLR
AGGVEGNLKRWTSMSQPQDTAGMPTLPRESHVVMQEPGGYYDNVGYVPERVNDNNPCSTS
DVDMAKVQVDVDVAKVQVDVDMTKVQGDCHDAIALQLLLKLKRHLKVVYSLDDARCQAFS
LKEPPKSGEAFSRQNVPFNIGNTNISLPSCLQDVASVYQDFKTALREDSMDFAVFIPSVQ
TRKRPTPRSTTRVRRTAAPSVTKARGGARGDDSDDADDDDWTGGPRMLDFSGGGRVTRQR
VQV
NT seq
5412 nt
NT seq
+upstream
nt +downstream
nt
atggaccccggcgccagcgccggcgggggcggacgctgggcgggcttcgagcgggcgtgc
cggctgcccaacaccgtccactccgaggtcctgccgtcgctgccgctccccaccctcccg
cgcgagctcggcttcgacgcgctccgcgacgacgagcccctcgccgcgcccgaccgcccc
gacatgatcatgcaggccgccgacatcgcccgcatcctcgccgacaccgacgtctcccac
ctgggcttcaccccggaggacaacgtcgacgtggatcccagccggtgctcctggctctgg
agggaggtgctcaagcacaaccccgacgccttcaaggtcaaggcgcccgggccgtcttcg
caaggtccatttggaggcccaggatatcaaaatcaagaacgtgagaagcactttgagcat
cttacacctaatacaagcaaagcacgaaatgaatctgcatttcctcaggatgaaattggc
tcacatagagagcattttcataatgaactgaccctggattcccttgcttcaaagaagcca
aaagtaaggaagaaagaaattaacaattctgtttcaagttctgcccccagcattcctaat
agtcaagaagttattgctaacttctgtgaggtggtggaggatttctgtggaaaagctgaa
attcccgacgatggagatggcggtgactggttgtcaatcccacttaatgatgttaaggtt
cttgtgaatgaaattacatctgttcgatccaaaaggatattgcatgaggttcctatggat
acagttacaaggttattagatgtgattgaccgtcagattcgatgttctcaaggtttatcg
atagatgtgaaggaaaattctgatgccgttgatgctgaacctctggttttctctgctttg
gagtccagtcatgctgcgttggcaattatgacccaccatgatatgccaaagcaactgtat
cgagaagaacttattgagcgaattattgatttctcaaggcatcagatcacagattgtatg
gcagcaagtaacccaaccttccgagctctctacaaaccagctgaaaatgttgcaaacaat
ggagatgatgatgaagatgatttggaaaatggacaagttagcaaaaggagacgtactgct
actaatttgagcatcaggaaatcttcaaacagagtttctgcttctgtctattctgctgtg
cagaaactatgcttgatattgggctttcttaaggaactgctcacaacagtgcgcttgtca
gatagttgtattctgcagttagcgaaaacatgctttactacattcttggtggataatatg
gagctattacaattgaaagcgattggggtgatttgtacggtgttttcatcatacacacag
cacaggagttacttggttgatgaaacacttcaccttcttcgcaagttgcagttttccaaa
aatgctgttagaacctaccatctagcagatgaagaccaaaagcaaatccagatgataaca
gcactgttagttcacctggttcagtttagtgcaattgttcccgatagcttaaaaggaaca
gttgattgggccactatcgttgatgcctctggtgatggtgattattatccaattaaatgc
catgaagtggcaacagaggcttgttgccgtttttggactgatgtccttcaacgttttact
gctgctaaatctcaagatatgtcggaaaccaaaggaataatagataatcttgttcaggat
ttcctaacgatactaaacttgccggagtatccagctgctgcttctattcttgaggttctc
tgtgtgttgctgcttcagaatgctggattgaaatctaaggacactaatgctcggtgcttt
gctattgatcttcttggtggtattgcatcaagattgaagcgtgattctgtcatctgtagt
gaggagaagctttggatattgcaagatctcactgatgcaggtagtgatggctcaaaaatc
ttgaaaaacaagtgctgtgtttgtcttggtggaagaggtataaatatagcctgtaatgaa
tgcggaagatgtttccattcagattgtatgggggctggtagtcaggataacttacagcgt
gatagtgtctgtcccttgtgtttttgcaaacaacagctcaatgtgctacagtcatactgc
cagtcacaaattaaagaaaatggcaaaaaaactgctgcctctgctagcaagaaatctgct
aaaccagttgaggtgccagcagtggatattgttcgacaaatcctactgagttatctccaa
gaagctggtccacaagatgatgggaacctgtttactcgatggttctatctgtgcatctgg
aacaaagaggaccaacattctaaggagatcatctactatctcgctaggttaaaatccaag
gagattctgcgagattctggcaatggtctggcaatttccagagattcagcaaagaaaatt
tgcttggcacttggtcagaagaactcattttgtaggggttttgataaaattcttgccctt
cttttggtatgtggttgcttccagatacttcagtttaatctatatgttctagagttaatt
cccaatgcttttcaggctagcttgagagaaaattctcctgtaataagagcaaaagcctta
cgtgcggtcagcagtatagttgaagctgaccctgaggtcttgggtgacaaacgtgtccaa
tctgctgttgaagggaggttttgtgattcggctatttctgttcgtgaagctgcccttgaa
cttgttgggaggcatattgcttcacatcctgatgtgggcctgaagtatatagaaaaagtt
gctgagcgaataaaggacactggagtcagcgttcgcaagcgtgcaatcaaaattataagg
gatctttgtgcttcaaatccgaacacggacacaactcatgcctttgtggagataatttct
cgtgttaatgatgaggagtccagtgtacaggatcttgtatgtaaaacattttatgaacta
tggtttgaagaaccaactgggagtcataagcacttggttgctgatggaagttcagttcca
atggagatagctaaaaagactgagcaaattgttgacatgttgaggaagatgcccaatcac
caacccctgattaccatcataaaacgtaacttgactcttgacttcctccctcagtcaacc
aaggctgcagggattaactcatccatggtggcatcaattcggaagcgttgtgaattcata
tgcaaacgcttattagaaagaatactgcaggttgaggagggagctgctaatgagatggaa
atccacgcgcttccttatattgttgccttgcaagcattttgtattgttgatcccacactc
tgcattccagtaactgatccttctaagtttgttgtgacactacaaccataccttaatatt
caggttgacaataaatcagctgcccagttgcttgaaagtattatttttgtgattgatgct
gttcttccactcataaggaagccgccacaaaatgttgttgaagaacttgagaaggatctg
aaacatatgatagttcgccattcgtatttgacagttgtacatgcttgtatcaagtgcctt
tgtgctctgagcaagtcagcaggtagaggtccaggattactggaaaaccttgttaatatt
ttctacaagcatctgtctggagctagttcagatagtcagctgttgggtcgatcactgttt
tgtcttggactcctccttcggtatggttatcaaatgatgctaacatctgaaaatcagctt
gattttcccaagattatccacttgctccagagaaaatatcttctcagggatgacttcagc
ttgaaggttcgagctttgcagactttgggatacatacttattgcgaagcctgaatttatg
ctacaaaaggatatgttgaaactcatagagacagcactatcttctgaggttgattataga
ttaaagattcaaggacttcaaaacctctatgagtatctcagagatgctgaaagccaactt
actgctgagagtactgcgaaacctcctgtacaatgtgaaataaatggcagaagtgaagtg
cctgttgctgctggtgctggagacaccaacatatgtggtggtattatccaattgtattgg
agttctattcttgataggtgcttggatacaaatgatcaagttcgccagagtgcacttaag
attgttgaagttgtacttcgccagggtttagttcaccctattacctgcgttcctcacctt
atagtacttgaaatggacccgctggaggggaactcgaagttggctcatcatctacttatg
aatatgaatgaaaagtacccttcattttttgaaagccgcttgggtgatggactacaaatg
tcatttaaattctttgaaatcatagtcggcaaccataagatggcagcaaacataaaatca
aatccaattgcatttgtcaaacctggcatatctagaatataccgtcttatccgttcaaat
cgaaattccagaaacaaatttgtccactcgatagttcggaaattcgagtctgatagccgg
agtcgcagcacagttagctttcttgtatactgtgctgaagttcttgcctccctgcctttc
acatgctccgatgaaccactttacttgatctatgatataaatcgagttattcaccttaga
gctggaggagtcgagggcaatttgaaaaggtggacttctatgtctcaaccgcaggatacg
gcgggtatgccaacattgccaagagagagtcatgttgtcatgcaagagcctggcggatat
tatgataatgtgggatatgttcctgaaagggttaatgacaacaatccttgcagtacttca
gacgtggacatggccaaagtgcaggtggatgtggacgtggccaaagtgcaggtggatgtg
gacatgaccaaagttcagggagattgccatgatgcaatagccctccagctactactgaaa
ttgaagagacatttgaaagttgtttatagtttagatgatgcccgctgtcaggcattttct
ctaaaggagcctccgaaatctggagaagcattctccaggcagaatgttccttttaatatt
ggcaacactaacatcagtctgccgagctgcctgcaggatgtagcttctgtttaccaggat
ttcaagacagcgctccgcgaagattccatggactttgctgtgttcatcccttcagttcag
actaggaagcgcccaaccccaagaagtacgacgagagtcaggagaacggctgcccccagt
gtcacaaaagcccgtggtggtgcacggggagacgattctgatgatgctgacgacgacgac
tggaccgggggcccaagaatgctcgacttcagtgggggcggccgtgtgacaaggcagagg
gtccaagtatga
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integrated database retrieval system
