Miscanthus floridulus: 136532282
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Entry
136532282 CDS
T10264
Name
(RefSeq) exosome complex component RRP4 homolog
KO
K03679
exosome complex component RRP4
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136532282
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136532282
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
136532282
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
136532282
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP4_S1
KH_6
ECR1_N
RRP40_S1
Motif
Other DBs
NCBI-GeneID:
136532282
NCBI-ProteinID:
XP_066380987
LinkDB
All DBs
Position
Unknown
AA seq
319 aa
AA seq
DB search
MKDRHLSLNQTQRVRLEAALHELQSLAPAIASAAAVTVADTIPVNQEDNILKGHGTSDQD
GEVVATLCGVVERVNKLVYVRTLRARYKPEVGDIIVGRVIEIAPKRWRLEINFSQDAVLM
LSSMNLPDGIQRRRTAVDELNMRSIFEENDVICAEVRGFQHDGSLHLQARSEKYGKLERG
QLLMVPPYLVKRKKQHFHHLEQYNVDLILGCNGFIWVGEHVVVGEKTKTTGGQQRFSTEA
ENFTPLETRKHICRLANAVRVLSALGFTLTVELIIETMEASASSNVEINDMLGAEFYVQT
AEREAKHRADLLRKKNGAR
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgaaggaccgccacctctcgctgaaccagacgcagcgggtccgcctggaggccgcgctc
cacgagctccagtcccttgcgcccgccatcgcgtccgccgctgccgtcaccgtcgcggac
accattcccgtcaatcaggaggacaacatcctcaaggggcacgggacgtcggaccaggac
ggggaggtggtggcgacgctctgcggggtggtggagcgggtcaacaagctggtctacgtc
cgtactctcagggcgagatacaagccggaggttggtgatatcatagttggccgtgtgatt
gagattgctcctaagcgctggaggttggagataaattttagccaagatgctgttctgatg
ctttcgtctatgaatttgcccgatggtattcagagaaggagaactgctgttgatgaactt
aatatgcggagtatctttgaagaaaatgatgttatctgtgctgaagttcgcggcttccaa
catgatggatctctacacctacaggcaaggagtgaaaagtatggaaagctcgagaggggt
caattgctgatggtacctccatacttggttaaacgaaagaagcagcattttcatcatctt
gagcagtacaatgtcgacttgattcttggttgcaatggattcatctgggttggtgagcat
gttgtggtgggtgaaaaaacaaaaacgacaggaggtcagcagaggttcagcactgaagca
gagaattttaccccattagaaacgaggaagcatatttgccggcttgccaatgctgtacgt
gtgctctcagccctaggattcactttgaccgtcgaactgataatcgagaccatggaagca
agtgcgtcatcaaatgtagagataaatgacatgctcggtgctgaattttatgtccagaca
gcagagagagaggctaagcatcgagctgatctgttgagaaagaagaatggggcaaggtaa
DBGET
integrated database retrieval system
