Miscanthus floridulus: 136532407
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Entry
136532407 CDS
T10264
Name
(RefSeq) ruBisCO large subunit-binding protein subunit alpha, chloroplastic-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136532407
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136532407
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136532407
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136532407
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136532407
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136532407
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136532407
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136532407
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136532407
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136532407
Exosomal proteins of other body fluids (saliva and urine)
136532407
Exosomal proteins of breast cancer cells
136532407
Exosomal proteins of colorectal cancer cells
136532407
Exosomal proteins of bladder cancer cells
136532407
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
MatP_C
Motif
Other DBs
NCBI-GeneID:
136532407
NCBI-ProteinID:
XP_066381108
LinkDB
All DBs
Position
Unknown
AA seq
577 aa
AA seq
DB search
MASANAISTASLISPLSQGRATRARYGRSQRFVVRAEAKDIAFDQKSRAALQAGVEKLAN
AVGVTLGPRGRNVVLDEYGSPKVVNDGVTIARAIELYDPMENAGAALIREVASKTNDSAG
DGTTTASVLAREIIKLGLLSVTSGANPVSLKKGIDKTVQGLIQELENKARPVKGGGDIKA
VASISAGNDEFIGSMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVT
NLEKSIVEFENAKVLITDQKITSIKEILPILEKTTQLRAPLFIIAEDITGEALATLVVNK
LRGILNVAAIKAPSFGERRKAVLQDIAIVTGAEFLAKDLGLLVENATEEQLGTARKVTIH
QTTTTLIADAATKDEIQARVAQLKKELAETDSVYDTEKLAERIAKLAGGVAVIKVGAATE
TELEDRQLRIEDAKNATFAAIEEGIVPGGGTAYVHLSTIVPSIKEKIEDPDERLGADIIQ
KALVAPASLIAHNAGVEGEVVVEKIKDSVWEVGYNAMTDKYENLIEAGVIDPAKVTRCAL
QNAASVAGMVLTTQAIVVEKPKPKPQAAEAAEGSLAV
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgcgaatgccatctccaccgcctccctcatctcgcccctctcgcagggcagg
gcgacgagggccaggtatggccggtcacagcggttcgtggtgcgtgcggaagccaaagac
atcgcctttgaccaaaaatccagggcagcgttgcaggccggcgtcgagaagctcgcaaac
gccgtcggtgtcaccctcgggccacgagggaggaatgtggtgcttgatgagtatggcagc
cccaaagttgtgaatgatggagtcactattgcccgggctattgagctgtatgatccaatg
gaaaatgctggtgcagcattgattcgtgaggttgctagcaagaccaatgattctgctggt
gatggcactacaactgcttccgtccttgctcgtgaaatcatcaagcttggccttctaagt
gtaacgtctggtgcaaatcctgtgtcacttaagaagggaatagacaaaactgtgcagggt
ctaattcaggagcttgagaataaggctagaccagtcaagggtggtggtgatatcaaagcc
gttgcatctatctctgctggcaatgatgaatttatcggatccatgattgctgaagcaatt
gacaaagtggggcctgatggtgttctatcaattgaatcctcctcttcttttgagactacc
gttgaagttgaagaaggaatggagattgaccgcggttatatttccccacaatttgtgaca
aacctcgagaaatctattgtggagtttgagaatgctaaggttcttattactgatcagaag
attacaagcataaaggaaattcttccgattttggagaagaccacacagctgagagcccct
ttgttcattattgctgaggacattactggtgaagctttggcgactcttgttgttaacaag
cttcgaggaattctcaatgttgcagcgattaaggctccaagctttggtgagcggcggaag
gctgtacttcaggacattgccattgtcacaggtgctgagttcctagcaaaagatcttggt
ttgttggttgaaaatgctacagaggaacaacttggtacagcaaggaaagtcacgatacat
cagactacaacaaccctcatagcagatgcagccactaaagatgagatccaagcgagggtt
gcacagctaaagaaggagcttgctgagactgattcagtttatgatactgagaaattggct
gagagaattgctaagcttgctggtggtgttgctgttatcaaggttggagctgcaactgag
actgagcttgaggaccgccagctaagaattgaggatgcaaaaaatgccacttttgcagct
atagaggagggcattgttcctggaggtggaacggcatacgtgcacctatctaccattgtc
ccttcgatcaaagaaaaaattgaggaccctgatgagcgccttggtgctgatattattcaa
aaggcattggtagcacctgcttcattgatcgcacacaatgctggagtagagggcgaagtg
gttgttgagaagatcaaggacagtgtgtgggaggtgggctacaatgcaatgacagacaag
tacgagaacctgattgaggccggtgtgatcgaccctgctaaggtgactaggtgtgcactc
cagaatgcggcctcagtagctggaatggtcctaaccacacaggcaattgttgttgagaag
ccaaagccgaagcctcaagcggcagaggcagcagagggaagccttgccgtgtaa
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integrated database retrieval system
