Miscanthus floridulus: 136532845
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Entry
136532845 CDS
T10264
Name
(RefSeq) sm-like protein LSM8
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136532845
09123 Folding, sorting and degradation
03018 RNA degradation
136532845
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136532845
03041 Spliceosome [BR:
mflo03041
]
136532845
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136532845
mRNA degradation factors
5'-3' decay
Lsm complex
136532845
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
136532845
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RVT_2
Motif
Other DBs
NCBI-GeneID:
136532845
NCBI-ProteinID:
XP_066381518
LinkDB
All DBs
Position
Unknown
AA seq
99 aa
AA seq
DB search
MASGGPALEPLVDQVISVITNDGRNIVGTLRGFDQATNIILDESHERVYSRKEGVQQLVL
GLYIIRGDNISVVGEVDEELDSRLDMSKLRAHPLKPVIH
NT seq
300 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccggcggtccggcgctcgagccgctcgtcgaccaggtcatctccgtcatcacc
aacgatggccgcaacattgtgggtacgctcaggggattcgatcaggccaccaacattatc
ctcgacgagtcccacgagagggtctattctagaaaggagggagtccaacagcttgttctt
ggtctgtacattatcaggggtgacaacataagcgttgtgggcgaggttgacgaagagctg
gattcaagattggatatgtccaagctaagggcgcacccactgaagcctgttatccactga
DBGET
integrated database retrieval system