Miscanthus floridulus: 136533211
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Entry
136533211 CDS
T10264
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136533211
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136533211
Spliceosome [BR:
mflo03041
]
Complex A
Other components
Complex A specific factors
136533211
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
eIF3g
PHD_4
zf-CCHC
RRM_5
KH_PNO1_2nd
DUF6319
RRM_7
RRM_10
Motif
Other DBs
NCBI-GeneID:
136533211
NCBI-ProteinID:
XP_066381881
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All DBs
Position
2:complement(152548025..152551326)
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AA seq
721 aa
AA seq
DB search
MASAETLARSPSREPSSDLPRAASSEPHHNGDGSGAGAGDSSRRRRRSRWEQSNDDSAAN
NSGGEGGTGGRKRKTRWAEEEPRPAIALPDFMKDFAAEMDPEVHALNARLLEISRLLQSG
LPLDDRPEGARSPSPEPVYDNLGIRINTREYRARERLNRERQEIISQLIRRNPTFKPPSD
YRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGKLLQ
KRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLTPVDEVLNEHKRQQLRELAALNG
TIRDDEFCRTCGEAGHRQYACPNKMNTFKSDVQCKICGDGGHPTIDCPVKGTSGKKMDDE
YQNFLAELGGGSAPESMNKSGGPMLALTGSGGASAGTGSNPPWSTSGGGAATGLNGIKKD
YDETNLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSLANA
AIAAMNGHHLEGRIIAVRVAGKPPQPAPAVSAPPSYPPLDPTSGGYSSQSYMGAPPPPPP
GSYAPVPWGQPPPYASYPPPPPGSSVYNPAPPAPGQAAPPPYGMQYPPLPPPPPAAPIPP
PGTAPSSDGAQNYPPGVTPPSSGAPTHPVATSVYASSGAPNAPSMYPPPPYSYSPYYTSP
FQPPPPPPPASVDPSQSIATAPWATHSAVPPPPPPLSSTTDQPTASYGADAEYDKFMSEM
K
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccgaaaccctagcccgctctccctcgcgcgagccctcctccgatctgccc
cgcgccgcctcttccgagccccaccacaacggcgatggctccggcgcgggcgccggagac
tcgtcccgccgccgccgccgcagccgctgggagcagtccaacgacgactccgccgccaac
aactccggcggcgagggcgggaccgggggccggaagcgcaagacgcggtgggccgaggag
gagccgcgcccggccatcgcgctcccggacttcatgaaggacttcgccgccgagatggac
cccgaggtgcacgccctcaacgcgcgcctcctcgagatctcgcgcctgctgcagtcgggc
ctcccgctcgacgatcgccccgagggcgcgcgctcgccctcccccgagcccgtctacgac
aacctcggcatccgcatcaacacccgcgaataccgcgccagggagcgcctcaaccgcgag
aggcaggagatcatctcgcagctcatccgccgcaaccccaccttcaagcccccctccgac
taccgcccacccaagctccagaagaagctctacatccccatgaaggagtaccccggctac
aactttatcggcctcatcattggccctcgtggcaacacgcagaagcgcatggagaaggag
accggtgctaagattgtcatcagggggaagggtagtgtcaaggaagggaagctgctgcag
aagagggacctcaagccggatcccagtgagaacgaagacctccacgtgcttgttgaggca
gacacgcaggaggcactggacgcggctgctggtatggtggagaagctgctcaccccggtg
gatgaggtgctcaatgagcacaagcggcagcagctccgggagcttgctgcgcttaatgga
acaattagggacgacgagttttgtaggacatgtggtgaggctggtcacaggcagtatgct
tgccccaacaagatgaacacgtttaagagtgatgtgcaatgcaagatctgcggggatggt
gggcacccgactattgattgtccagtcaagggcacttctgggaagaagatggatgatgaa
taccagaacttcctggctgagcttggtggtgggagtgcacctgagtccatgaacaaatct
ggtggtccaatgttggctctcacaggaagtggtggtgcttctgctggaactgggagtaac
ccgccttggtcaaccagtggtggtggtgctgccactgggctcaatggtatcaagaaagac
tatgacgagacaaatctgtatatcggctacctgccacctacaatggatgatgctggacta
gtcagtctgttttcgcaatttggggatattgtaatggctaaggtgatcaaggatcgaaac
actggacagagcaaaggatatggatttgtcaagtattcagatgtgtcactggccaatgca
gcgattgctgcaatgaatggtcaccatcttgaagggagaattattgcggttagagttgca
ggaaagccgccacagccggcaccagcagtgtcagcacccccatcttatcctcctttggat
cctacttcaggtggctattcctcccagtcctacatgggggcaccaccgccacctcctcca
gggagttatgctccagttccttgggggcagccaccaccgtatgcttcatatcctccgcca
ccaccaggctctagcgtctacaatcctgcaccccctgcaccaggtcaagctgccccacct
ccatatgggatgcagtatccaccactaccaccaccacccccagcagctccgatccctcca
ccaggcactgctccatcaagtgatggagctcagaactatccccctggtgtaacaccacca
agttctggcgcacccacccaccctgttgcaacatcagtatatgcatcatctggcgcacca
aatgcaccatcgatgtaccctccaccaccttatagttattccccatactatacatcacca
tttcagccaccacctccaccaccaccggctagtgttgatccctctcagagtattgcaact
gcaccttgggcaacccacagtgcagtgccgccaccaccaccacctctgtcctccacaacc
gaccagcctactgcttcctatggtgccgatgcagagtatgacaagttcatgtcagagatg
aagtga
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