Miscanthus floridulus: 136533296
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Entry
136533296 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar-sorting protein BRO1-like
KO
K12200
programmed cell death 6-interacting protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03250
Viral life cycle - HIV-1
mflo03272
Virion - Hepatitis viruses
mflo04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
136533296
03272 Virion - Hepatitis viruses
136533296
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
136533296
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136533296
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136533296
Membrane trafficking [BR:
mflo04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT associated proteins
136533296
Exosome [BR:
mflo04147
]
Exosomal proteins
Proteins found in most exosomes
136533296
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRO1
ALIX_LYPXL_bnd
iSirtuin
Motif
Other DBs
NCBI-GeneID:
136533296
NCBI-ProteinID:
XP_066381983
LinkDB
All DBs
Position
1:complement(64525496..64532491)
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AA seq
868 aa
AA seq
DB search
MASAAGSSNVMLAIHEKKTTATDLYRPLRLYIASVYSEREAAAADDDLTVVRDLRAAVEQ
PSLPDPSSLEQRRDALLAYARALALVEPRFPISADRAHVHSLTFTWHDAFKGNKKCALAS
VHLEKAAVLFNLGAVYAQIALAADRSTDVGIKTACGAFQSAAGSFAWLRESGVAAKAVAA
GATTVDITPECAGMLEKLMLAQAQECFFEKVIGGGKPPALCSKVARQVGIFYEEAYAALS
APPLSQHFDKTWVSHVQLKAAQFYADACYRYSLDLHQKEEIAEEIARLKIGMSALADAKK
AAKGVAAQLLDSVNKLESNMKTNLERAMKENDRVYLMRVPAAGSLGALPAASLVKPTSLA
EVLDASKERLFSSLVPDGSMKALSKYTEMVDNIIRTQAEKLQQASEITRVRLKEMDLPDS
ILSLEGNITLPLDLKEDVEAVQISGGPAGLESELQQLRDLSRVNQELLVQTEELLQKEAN
EDAQFRTQFGSRWTRPQSSTLTKNIQDRLNLFASNLKRAADSDSLIERGVKENYPLMSIL
DKRPIESALPSISRPIMSLDGNEDAIVGALKQSLRQLESLGAQRAGLEDMLKEMKRKDDI
LPKLMAGVGSHDDLFKKEMAKYDPICADIADNIEAQEQLLLQIQAQNEQFAAVFNLEDYK
AARERCYKQIAAAVAKYREFKKNINEGLNFYVTLQEAIGKIKQQCSDFIMTRNIQCREMI
EDVQRKLAGFSFSSSSHSSLQRNASVPPDQSSPSPPPHVQAPYASPPGVDSRPGYSQPEP
RPAYSQPYPPSYGAPAQQPPYGAPHPGQYQQPAHQPPPGHDYGQPAYPGWRGPYYNAPQP
QQSAPYPQPPYNAPGAYPPHQSNYYRPQ
NT seq
2607 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcggcggcggggtcctctaacgtgatgctcgcgatccacgagaagaaaacgact
gctactgatctctaccgcccgctgcgcctctacatcgcctccgtctactcggagcgcgag
gccgccgcggccgacgacgaccttaccgtggtgcgcgacctccgcgccgctgtcgagcag
ccctccctcccggacccgtcctccctggagcagcgccgcgacgcgctcctcgcctacgcg
cgggccctggcgctcgtggagccccgcttccccatctccgccgaccgcgcccacgtccac
tccctcaccttcacctggcacgatgccttcaaggggaacaagaagtgcgccctcgcctcc
gtccacctcgagaaggccgccgtgctcttcaacctcggcgccgtctacgcccagatcgcg
cttgccgccgaccgctccaccgacgtcgggatcaagaccgcgtgcggcgccttccagagt
gcggcagggtcattcgcgtggctcagggagagcggggtcgcggccaaggctgtcgctgcg
ggggccaccaccgtggacatcacgcccgagtgcgccggcatgctggagaaactcatgctc
gcgcaagcgcaggagtgcttcttcgagaaggtcataggtggagggaagccacccgcgctg
tgctccaaggtggcgcggcaggtgggcatattctatgaagaagcgtatgcagctctcagt
gcacctcctctaagtcagcactttgataagacatgggtgtcccatgtccagctgaaagct
gctcaattctacgccgatgcttgctataggtattcattagatcttcatcagaaagaagaa
attgctgaggaaattgcacgtttaaagattggtatgagtgccttggcagatgctaagaag
gctgcgaagggagttgctgcccagcttctggattctgtcaacaagctggaaagtaacatg
aaaaccaacttggaaagggctatgaaggagaatgatcgtgtttacctgatgcgggttcca
gctgctggttccttgggagccctccctgcagcgtcccttgtaaagcctacctctttggct
gaagttttagatgccagcaaggaaaggcttttttcatcacttgtgcctgatggcagcatg
aaagcactctctaagtacacagagatggtagataatattatccggacccaggcagagaaa
ttacagcaagctagtgagatcactagagtcaggctgaaggaaatggacttaccagattct
attctttcattggaaggaaatataaccttgcccttggatctgaaggaagacgtagaggct
gtgcagataagtggtggccctgctggcttagaatctgagttgcagcagcttagggatttg
agcagggtcaatcaggaactacttgttcagactgaagaacttctacagaaggaggcgaat
gaagacgcacaatttcgtacacaatttgggagtcgttggactagacctcaatcaagcacc
ctaaccaagaatattcaggatagattgaatctgtttgcttctaatctcaagagagctgct
gatagtgattctctgattgaacgaggcgtgaaggagaactatccattgatgtctatcctt
gacaaaagaccgatagagtctgcacttccaagtatttccaggcctatcatgtccttggat
ggcaatgaagatgccattgttggagccctgaaacaaagcttgagacaactggagtctctt
ggagcacaaagggcaggtcttgaagacatgctcaaagaaatgaaaagaaaggatgatata
ttgcctaagttgatggctggtgtgggatcacatgatgatcttttcaagaaggagatggct
aagtatgatcctatctgtgctgatattgctgataacattgaggcacaggaacaattattg
ctacaaatacaggcacaaaacgagcaatttgctgctgtattcaacctagaggattacaaa
gctgctcgtgagagatgttacaagcaaatcgctgctgctgttgctaaataccgggagttt
aaaaagaacattaacgagggcctaaacttttatgtgactttacaggaagcaataggcaaa
ataaaacagcagtgcagtgactttataatgacccgaaacattcaatgccgtgaaatgatc
gaagatgtgcagaggaagctagcgggtttcagcttctcatcctccagccactcctctttg
cagaggaatgcttctgtaccacctgatcagagcagcccatcaccaccgccgcatgttcag
gctccctatgcctctccacctggggtagactcaaggcctggatattctcaaccggagcca
agacctgcatactcacagccataccccccatcctatggggcgccagcacaacagcctcca
tatggtgcaccgcaccctggtcagtaccagcagccagcgcaccagccgcctcctggccat
gactacggtcagccggcatatcctggatggcgcggcccatattacaatgcccctcagccg
cagcaatctgcgccatatccacaaccaccgtacaatgcccctggggcttaccctccgcac
cagagcaactattacaggcctcaataa
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