Miscanthus floridulus: 136533495
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Entry
136533495 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: DExH-box ATP-dependent RNA helicase DExH3-like
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136533495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136533495
03012 Translation factors [BR:
mflo03012
]
136533495
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136533495
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136533495
Translation factors [BR:
mflo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136533495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
dsrm
HA2_N
Motif
Other DBs
NCBI-GeneID:
136533495
NCBI-ProteinID:
XP_066382136
LinkDB
All DBs
Position
Unknown
AA seq
689 aa
AA seq
DB search
MQKQALRKRKSQIASVVEDAVDAADLRDYSSRTRDSLSCWNPDSIGFNLIENVLCHICQK
ERSGAIIVFMTGWDDINALKEQLQANPLLGDPSKVLLLACHGSMASSEQKLIFDKPEPGV
RKIVLATNLAETSITINDVVFVVDCGKAKETSYDALNNTPCLLPTWISKASARQRRGRAG
RVQPGECYHLYPRSVYDAFADYQLPELLRTPLQSLCLQIKSLRLGSISEFLSRALQSPES
LSVQNAIEYLKVIGAFDQNEELTVLGKHLSMLPVEPKLGKMLIFGAIFNCLDPILTIVSG
LSVRDPFLTPFDKKDLAESAKLQFSCRDYSDHLALVRAYEGWREAERDRAGYDYCWKKFL
SVQTLKAIDSLRRQFLFLLKDTGLVDENMTVCNKWSRDENLVRAVICAGLYPGVSSVVNK
EKSISLKTMEDGQVMLYSSSVNGKEAKIPFPWLVFNEKVKVNSVFLRDSTAISDSILLLF
GGCIKQGGLDGHLKMLGGYLEFFMNRDLASTYLSLKSELDNLIHCKLQNPRMDIQTSEEL
LSAIRLLVTEDPCSGRFVYGRQEPRSKKAKTMLLPSSMSGGGGNGGDNAKNQLQTFLTRA
GHNNPTYKTKQIKSYLFRSTVEFNGMQFVGQPCANKKLAEKAAASEALNWLTGDGGGTIT
DSRGAQDADPMSLLMRPPRRRRHSHHHRS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaagcaagctctacgaaagcggaagagccaaatcgcttctgttgtggaagatgca
gttgacgctgctgatttgagagactatagttcgcgaactcgtgattctctatcctgttgg
aatcctgattcaattggttttaatttaatagaaaatgtcttatgccatatttgtcaaaag
gaacgatcaggtgcaataattgtatttatgactgggtgggatgacattaatgcattaaaa
gagcagctgcaagcaaatccactgcttggagatccaagcaaagttttgttgctcgcttgt
catggctctatggccagttcagagcagaaattaatatttgataagcctgagcctggagta
aggaaaatagttcttgccacgaatttggctgaaactagtattactatcaacgatgtagtt
tttgttgttgactgtggcaaggcaaaagagacatcttacgatgcactgaataatactccc
tgtttgcttccaacctggatctccaaggcttctgccagacaaagacgaggacgagctggt
cgagtccaaccaggggagtgctaccatctttatccacgatctgtatatgatgcatttgct
gactaccagttaccagaacttctgagaacccctctccaatccctctgtttgcaaataaaa
agcttgaggctaggaagtatatcagaatttttatccagagctttacaatcacctgaatct
ctatcagtacaaaatgccattgaatatctcaaagtcattggagcttttgatcagaatgaa
gagttgacggttcttggaaagcacttgtctatgcttccagttgaacctaagttaggaaag
atgcttatttttggggctatttttaattgtctggaccccatattaaccatagtttctgga
cttagtgttagagatccttttttgacccccttcgataagaaagatcttgcagagtcagct
aaattgcagttttcatgccgggactacagtgatcatcttgcactagttcgtgcatatgaa
ggatggagggaggctgaaagagaccgtgctggttatgactactgttggaaaaaatttctt
tcagtgcaaacattgaaagcaatagattctcttcggcggcagtttctctttcttctgaag
gatactggtttggttgatgaaaacatgactgtgtgcaataaatggagccgtgatgaaaat
ctagttcgggcggtaatttgtgcaggactatatccaggtgtttcctctgttgtgaacaag
gagaaatccatctccctcaagacaatggaggatggacaggttatgctttattcgagttcg
gttaatggtaaagaagccaagattccattcccctggctagttttcaatgagaaggtgaag
gtgaattctgttttcctccgggattcaactgctatatctgattctatactgttgttattt
ggaggctgcataaaacaagggggcttggatggacacttaaaaatgcttgggggttatctt
gagttcttcatgaatcgtgatcttgcttcaacttatttgagtctgaagagtgaacttgat
aatttaatccattgcaagctccaaaacccaaggatggatatccaaacgagtgaagagctg
ctatcagccatccgtttgctggtgactgaagacccatgcagtgggcggttcgtctacggc
cgacaggagccaagatcaaagaaagcaaagacaatgcttttgccatcctccatgagtggc
ggtggtggcaacggaggggataatgccaagaaccagctccagactttcctgacccgggcc
gggcacaacaaccccacctacaagacgaagcagatcaagagctatctcttcaggtcgacg
gttgagttcaacggcatgcagttcgtggggcagccgtgtgcaaacaagaaacttgcggag
aaggctgctgcgagcgaggcactcaattggctcacaggagatggtggtggaacgatcact
gactctaggggggcccaggacgcagaccccatgtccttgctgatgcgaccaccacgcagg
cgacggcatagccatcatcatcggagctga
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