Miscanthus floridulus: 136533857
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Entry
136533857 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: BRCT domain-containing protein At4g02110-like
KO
K10728
topoisomerase (DNA) II binding protein 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136533857
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136533857
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136533857
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Replication Initiation Factors
Other initiation factors
136533857
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
136533857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCT
PTCB-BRCT
BRCT_2
RTT107_BRCT_5
PHD
PIF1
PHD_2
Motif
Other DBs
NCBI-GeneID:
136533857
NCBI-ProteinID:
XP_066382476
LinkDB
All DBs
Position
Unknown
AA seq
1371 aa
AA seq
DB search
MPPHGPEEDADAHLFAGVRFVLHGFDQVSASQYRLEIERCGGVHVGGLDGDCTHVIVSNT
LYDDPVCVAARKAGKKVVVDQWVEDSFELGELADADRVLYAPVRDFKGIPGCDKLHICLT
GYQKNWRDDIMKMVSLMGANFSKSLAANIITHLICYKFEGDKYELAKQVNIKLVNHRWLE
ECLKAWEILPVDHYTKSGWEVEIMEAQAKDSEDEAEDAGRGSSSSRHIGRGTPIREIRSK
SHVDSAVHAPSGGPTISASNVVGATGKHLGTPEQIMKADDASTKSPDIRADSGSAPDTKC
AATSVDHGAITHSRIYHSENDEAPADQASRDEAKDDHRRELDTRASTLNTPSVHKSIALT
IPADNIENTDGNCFHGSSQINVNNDLQSISSEENFSKKILHSKDLSRKVDQKDDGHVPDP
KPNISQSSVEENLNTCGFNPRLEGNSASRNDQTFGYSRRRSSKSVSPKVTKHVDRSGGGL
AHRRKSILSSVNSKAPNEAPDSGSGISSSPFSGKESALEAAASNVGRSPTESTKVDGHVN
SGPTMNSTEKQMSGCKGHLLSYRRTSLKRVSSAEVEKLPENSANDKNMGAPDVVKTPALH
EATTEERCNISPSVSSEVRKESLGVHQNRDAEMTDAQRVSKIEAAAPCSKPDKEVSCQNL
GEDPKDVPVNKITDEHGTFPSKVSTSRVRKAGSKRSRNADSKAAGEFVNSKSEVAPSKPN
HDKVSSHENVEAQQREGCCSPNAAENTPSSLAEALNTKSRNEVLTSSHGPNRKTSESLVA
SKAESVNMTLQRNKKGNRRKLSNTSSADENQRSSSRTVPNSKSSNLVAKGSRTADVNISD
SPTVDDETETLPSNSSFNEAVPPGNGDENYKRLSSSASADDPETCAANKVPNNRIRKVVA
KRKLSAVQNHKSGSEPCKTAKVLVSEDKVVSPARVVQSSRNANKVTVDKDLQNTNEGRTN
DTVGSFCKDATEERSKDMQSSKTRSNRRQKVADLVDGSTDHDKENIPVSSNFTSNTKCGK
NSKSSKSITKALQSSKAVLDENSMIKRNDYGTLNVPEPTWFILSGHRLLRKEYRTILRRL
RGRVCRDSHHWSFQATHLVTTELRRTEKFFAAAAAGRWILKPDYLTACNEAGKFLEEEPF
EWHGQGLNIGDTISLDAPRKWRQLKQRTGYGAFYGMQVIIYGECIAPTLDTLKRTIRSGD
GTILATSPPYTRFLKSSVDFAVVSAGMPSVDAWVQEFMRHNIPCISADYLVEYVCKPGHP
LSKHVLFNMHDLAERSLQKLLKNQEDAIAMDAEPKSCSACGSNNRERLMLMCGGGVRESG
XGCGVRVHADCCNPPVEGCGGGDWLCDRCDQQKSAKKAKKTAAKSRVLKQR
NT seq
4116 nt
NT seq
+upstream
nt +downstream
nt
atgcccccgcacggccccgaagaagacgccgacgcgcacctcttcgccggcgtccgcttc
gtgctccacggcttcgaccaggtctccgcgtcccagtatcgcttggagatagagcggtgt
ggcggcgtccacgtgggaggtttggacggagactgcacccacgttatagtttccaacacc
ttatatgatgatccagtgtgtgtggcagcgaggaaggccgggaagaaggtcgtcgttgat
cagtgggtggaagacagcttcgaactcggagaattggctgatgcagatcgggtactatat
gctccagtcagagatttcaaaggcattccgggttgcgataaacttcacatttgcttgaca
gggtaccagaagaattggcgtgatgacataatgaaaatggtttctttgatgggagcaaac
ttctccaagtctttggcagcaaacataattacccatctcatttgctacaaatttgaaggt
gataaatacgaacttgctaaacaggtgaatataaagcttgtcaatcaccggtggctggaa
gaatgcttaaaggcatgggaaatccttccggttgatcattatacgaaaagtggttgggaa
gtagagataatggaagcacaagctaaggactctgaagatgaagcagaagatgctggtaga
ggctcatcaagtagcagacatattggcagagggacacctattagagagatcagatccaaa
tctcatgttgattctgctgtccatgcacccagtggaggtcctactatctctgctagcaat
gtagtgggtgctacaggaaaacacttgggcactccagaacagattatgaaagcagacgac
gcgagcacgaaatcacctgacatcagagctgactcaggaagtgcccctgacacaaagtgt
gctgcaacatctgttgatcatggtgccattacccactctcgcatttaccacagtgagaat
gatgaggctcctgcagatcaggccagtagggatgaagctaaagacgatcacagaagggaa
cttgacaccagggctagtacccttaatactcccagtgtacataaaagcattgcactcact
attccagcggacaacatagagaacactgacgggaactgtttccatggttccagtcagatc
aatgtcaacaatgatcttcagtcaatctcttctgaagaaaatttctccaagaaaatatta
cactcaaaagacttgagcagaaaggtagatcagaaggacgatgggcatgtacctgatccc
aaacccaacatttctcagtcatcagttgaagaaaacctaaacacgtgtgggtttaatcca
agattagaaggcaattcagcatcaagaaatgaccaaacctttggctattctagaaggcga
tcttcaaaatcagtatcacctaaagtgacgaagcatgttgatagatctggcggtggactt
gctcataggaggaaaagcattctttcttcagtcaattcaaaggcgccgaatgaagcccca
gactcggggagtggaatatcaagtagtcctttttcaggcaaggaaagtgcattggaagca
gctgcttctaatgtgggtagaagccctaccgaatctactaaagttgatggtcatgtaaac
agtggtccaactatgaattcaacagagaagcagatgtctggatgtaaaggccacctgtta
agttataggagaacatctttgaagcgtgtaagctctgctgaagtggaaaaacttcctgaa
aattctgctaacgataagaatatgggggcacctgatgtagtaaagacaccagcactgcac
gaggcaacaactgaggagcgctgtaacatatccccttctgtcagttctgaagttagaaaa
gaaagtttaggtgttcaccagaatagggacgctgagatgactgatgctcagcgggtaagc
aaaattgaagctgcagctccttgctcaaaacctgataaagaggtttcttgtcagaacttg
ggagaagatcctaaagatgtcccagttaacaagatcactgatgaacatggaacatttccc
tcgaaagtatcaacttccagagtgaggaaggctggttccaagcggtctcgcaatgctgac
agtaaagctgctggtgaattcgtaaatagtaaaagtgaggttgcaccttcgaagcccaat
catgataaagtttcttctcatgaaaacgtggaggcacaacagagagaagggtgttgtagt
ccaaatgctgccgaaaatacaccatcatctcttgcagaagccctgaacaccaaatcaagg
aatgaagttctaaccagctctcacggtcccaatcgcaagacaagcgaatcactagtggct
tccaaggcagagtctgttaatatgactctgcagaggaacaagaaggggaaccgcagaaag
ctttcaaacacttcaagtgcagatgaaaatcaaagaagttcatctcggacggtaccaaat
tccaaatcaagtaatttggttgcaaagggatctcggactgctgatgtcaatatatctgac
tcaccaactgttgatgatgaaactgagacattgccatcaaactcgagttttaatgaggca
gttcctccaggaaatggtgatgaaaactataaaaggctttcaagcagtgcaagcgcagat
gaccctgaaacatgtgcagcaaataaagtaccaaacaatagaatccgtaaggttgtagcc
aagaggaaactatctgctgtccaaaaccacaaatctggtagtgagccttgcaagactgcg
aaggtattggtatctgaagataaagttgtctcaccagcgagagttgtacagagttctaga
aatgctaacaaggtaacagtggataaagacctgcagaacaccaatgagggtaggacgaat
gatacagttggatcattttgcaaagatgccacggaagagaggtcaaaagacatgcagagt
tctaaaactagaagcaacagaagacaaaaggttgcagatttagtggatggttcgacagac
catgacaaggagaacataccagtcagtagtaattttacttccaatacaaaatgtggaaag
aacagcaagagttccaaatccatcacaaaggcattacaaagtagcaaagctgtgcttgat
gagaacagtatgatcaaaagaaatgattatggaaccttgaatgtgccagaaccaacatgg
tttattttaagtggacatcgcctgctgagaaaagagtataggactatacttagacgcttg
agaggcagagtttgcagggattcacatcactggtcttttcaagcaacacatcttgtcacc
actgagctgcgcagaactgaaaaattcttcgcagctgctgcggctggcaggtggatactg
aagcctgattacttgactgcttgcaatgaggctggcaagttcttagaggaagagccattt
gagtggcacggtcaaggcctgaacatcggtgatacaatcagcttggatgctccaaggaag
tggcgccagctgaagcagcgtactggctatggcgctttctatgggatgcaggtcattata
tatggggaatgcattgctccaacactggacacgctaaagcgcacgatcagatctggtgat
ggcaccatcttagcaacctccccaccttacacccggttcttgaagtccagtgtcgacttc
gcggttgtatccgcgggcatgccaagcgtggacgcgtgggtgcaggaattcatgcggcac
aacatcccatgcatcagcgcagattatctggtggagtatgtgtgcaagcccgggcacccc
ttgagcaagcacgtcctcttcaacatgcacgatctggcagagaggtcactgcagaagctc
ctgaagaaccaggaagatgctattgctatggatgccgaacccaagagctgttctgcctgt
ggatcaaacaaccgggaaaggctgatgctcatgtgcgggggcggtgtaagggaatcaggc
nncggctgtggggtccgggtgcacgccgattgctgcaaccctcccgtggaaggctgtggt
ggtggtgactggctgtgcgacaggtgcgaccagcagaaatctgcaaagaaggctaagaag
accgctgctaaatcaagggtgctgaaacaaagatga
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integrated database retrieval system
