Miscanthus floridulus: 136534056
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Entry
136534056 CDS
T10264
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
136534056
mRNA degradation factors
5'-3' decay
Decapping complex
136534056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136534056
NCBI-ProteinID:
XP_066382638
LinkDB
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Position
Unknown
AA seq
1338 aa
AA seq
DB search
MASPSGNPNPNPNPPFEIGKLFRPPNPMPTATPNTIFPGVAGGPAGPPPPSGPYSYPPVT
PPFHRGPYIHYPQDPHAMPRPVVSFPMPNPNLNPNPNANPNAAAPGPNPGVRLMQLLGNS
GPTQLETAVSMPQPTSEFAQLQPLPAMPSAPPARMLSSTNSKVPRGRLLGTGERAVHDVD
SRLPGEAQPPQLEVTPITKYTSDPGLVLGRQIAVNRTYIVYGLKLGNIRVLNINTALRSL
LRGHTQRVTDMAFFAEDVHRLASASVDGRIYVWRIDEGPDEEKKQQITGKIEIAIQIVGE
AEAYHPRICWHSHKQEILFVGIGNCVLRIDTTKVGRGKDFTVEEPVKCHLEKLIDGVRLV
GKHDGDVTDLSISQWMSTRLASGSKDGTVKIWDDRKQVPLSIFKPHDGQPVYSVAFLTAP
ERPNHINLITAGPLNREVKIWASTNEDGWLLPSDSETWKCTQTLELVSSLEPRVEEAFFN
QVAVLPQASLILLANAKKNAIYAVHVEYGPDPASTRLDYIADFTVAMPILSLTGTHESQP
DGEQVVQVYCVQTMAIQQYGLELSLCSPPTADSTGFGRDPAISRVYEAPLEMAGTESSTG
TSFTDSYSVSALSKPPTVDQSADLDLKPSAPPLAYSEGDGSMPLPSAPLAPKMEIPGSGP
APGTRDIDQSAFDYTTNRNMERDALKRPDTPMPIRKDILGKDEPRDGHSDVPMLPNPRLM
FQVGGNATHLVTPSEIISGTLSSAENNDVSKSDGGKSQDISSRSSRVAEVEPKHIDESKP
DQNLGLEAVKETQIVCENMEKTQTSLEQTVEMISERSVTTDKYSVEESQSSSDRRASDQT
GVADENVLKKFVEIPEKIDYSSASREQSSSFTKEEKVLHPQTSGQPSPPVSAFNSIESHE
PLSSTYLPASSFPEAAATQGMLQQLMGMQKDMEKQLSTVVPASIAKEGKRLETSLGRAVE
KSIKANIDAFWVRLQEENTKREKADRERMQQLVTLITNSINKDLPSNLEKSLKKEISSLG
PIVARAITPIIEKCLTSAVYDSVQKGVGDKVCNQLEKSVTGKLEATLARQIQMQFHTSGK
QALQDALRTSFESLLVPAFEQTCKTMFEQIDGAFQKGMSEHSIAIQQQVEAAHTPLALTL
KETINSASSITQSFSSELLDGNRKLLALVTSGNAKAHNTSALQPINGPMGGPQEVEAPLD
PMKELSRLISERKFDEAFTMALQRSDVSVVSWLCSQVDLRALCAMAPVPLNQGVLLALLQ
QLAIDIHNETSQKVQWMTDVAMAINPADQMIAVHVRPIFEQVYNQLAHQRTLPTTTASDG
TSIRVIMHVINSVLLSYK
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctccgagcggaaaccctaacccgaatccaaatccaccattcgagatcgggaaa
ctcttcaggccaccgaaccccatgcccaccgccacccccaacaccatcttccccggcgtc
gccggaggcccggcgggcccgccgccgccgtctggtccctactcctaccctccggtgacc
ccgcccttccaccgcggaccctacatccactacccgcaggacccccacgccatgccccgc
cccgttgtctccttccccatgccaaacccaaacctgaaccccaacccgaacgctaacccc
aacgccgccgccccgggccctaaccccggcgtgcgcctcatgcagctgctcgggaactcc
gggccgacccaactcgagaccgccgtctccatgccccagcccacgtcggagttcgcacaa
ctgcagccgctcccagcgatgccatctgcgccgccggccaggatgctgagcagcaccaac
agcaaggtgcccaggggacggttacttggcaccggggaacgagcggtgcacgatgttgac
tcgaggctgcctggggaagcgcagccaccgcagctggaggtaacaccgattaccaagtac
acatcggatccggggctcgtgctgggcagacagatcgctgtgaaccggacgtacatcgtg
tatggactcaagctcggtaacatccgtgtgctgaacatcaacaccgcactccgctcactc
ctccgtggtcacacacagagagtgacagacatggctttctttgctgaggatgtccatcgt
ttggcaagcgcgagcgtagatgggcggatatatgtgtggaggatcgatgaaggacctgat
gaggaaaaaaaacaacaaattactggaaagattgaaatcgccatccagattgtaggcgag
gctgaagcttaccatccaaggatatgttggcactcgcataagcaagagattctctttgtt
ggaattgggaactgtgtcttaagaatagacacaactaaagtgggtagaggaaaagacttt
actgtggaagaacctgttaaatgtcatcttgaaaagcttattgatggtgttcgcttagtt
ggtaagcatgatggtgatgtgactgatttgtccatatctcaatggatgagcacccgcctg
gcctccggatccaaggatggcacggttaagatctgggatgatcgcaaacaagtgccatta
tcaatttttaagccccatgatggtcaacctgtttattcagttgcttttcttacagcacct
gaacgaccaaatcatataaatctaattacagcgggtcctctgaatcgagaagttaaaatt
tgggcttctactaatgaagatggctggttgttgccaagtgattctgagacttggaagtgt
actcagaccttggaactcgttagttctctggaacctagagtcgaagaggcatttttcaac
caggttgcagtgctgcctcaagcaagcctgattttgcttgcaaatgctaaaaagaacgct
atttatgccgtgcatgttgagtatggcccagatcctgcctctactcgcttagactatata
gcagatttcacagttgcaatgcctatattaagcctcaccggaacacacgaaagccaacca
gatggtgaacaagttgttcaagtctattgtgttcaaactatggccattcagcaatatggt
ctagagttatcactctgttcgcctcctacagctgatagtactgggtttggaagagatcct
gctatttcccgtgtttacgaggcgcctctggaaatggcaggaacagagtcatctacagga
actagtttcacagactcttactctgtcagtgctttgagtaaaccaccaactgttgaccag
tctgcagatcttgatctgaaaccatcagctccaccgcttgcatactcagaaggtgatggt
tccatgcctcttccatctgcacctcttgcaccaaagatggagattcctggatcaggacca
gcacctggaactcgtgatatagatcaatcagcttttgactatacaacaaacagaaacatg
gagcgtgatgctttgaaaaggccagatacacccatgcccattaggaaggatatcttagga
aaagatgaaccaagagatggtcacagtgatgttccaatgcttccaaatccccgtttgatg
tttcaggttggagggaatgctacacacttggttactccatctgaaattatatcgggcact
ctctcgtctgctgaaaacaatgatgtttccaaatctgatggaggaaaaagtcaagatatt
tccagcagaagctctcgggttgcagaagtggaaccaaagcatattgatgagagtaaacca
gatcaaaatttaggacttgaagctgtcaaggaaactcagattgtttgtgagaatatggag
aaaactcagacttctttggagcaaactgttgaaatgatcagtgagcgctcagttacaact
gataagtacagtgtggaagaatcacagtcatcatctgatcgacgggcatcagaccagact
ggtgttgctgatgaaaatgttctgaagaagtttgtggaaatccctgagaaaattgattac
tcctctgcttccagggagcaatcgtcttcgtttacgaaagaggagaaagttttgcaccct
caaacatctggtcagccatctcctcctgtgagtgctttcaattcaattgagtcacatgag
cctttgagctccacatacctacctgccagctccttcccagaagctgctgccacacaaggg
atgctacaacagctcatggggatgcagaaggacatggaaaagcagcttagtactgtggtt
cctgcatccatcgcaaaggagggcaaaagacttgagacatcattagggcgagctgtagag
aaatcgatcaaggctaatattgatgcgttttgggttcgtctccaggaggaaaacactaag
cgtgaaaaggctgatagagagcgaatgcagcaattggttactctcattacgaactcaata
aataaggacttgccttctaatctggagaagtcacttaagaaagaaatttcttcacttgga
cctattgttgcccgcgcaattacacctattattgagaagtgcctgacctctgctgtttat
gattcagttcagaaaggggtgggtgacaaggtgtgcaatcagctggaaaagtctgttact
ggaaaacttgaagctacacttgccaggcaaatccaaatgcagttccatacatctggaaaa
caggctcttcaggatgctttgcgtactagctttgaatcattgcttgttccagcgtttgag
caaacatgcaaaacaatgtttgagcaaatagatggtgcatttcaaaagggaatgtctgag
cactccattgctattcagcagcaagttgaggctgcacatactccgttagcgctaactcta
aaagaaaccatcaattctgcatcatcaatcacccagagtttttcatcagagttacttgat
ggcaatcgcaagctattggcacttgttacttctgggaatgccaaggcacataataccagt
gctttgcagcccattaatggtcctatgggtggcccccaagaggttgaggctcccttagat
ccgatgaaagagcttagcagactgatatctgaacgcaagtttgacgaagcgtttacaatg
gctcttcaaaggagtgacgtttccgtagtatcgtggctgtgctcccaggttgatttgcgg
gcattatgtgcaatggccccagtacctcttaaccagggggtccttcttgccttattgcag
cagctagcaattgacattcacaatgagacatcacaaaaggttcaatggatgacagatgtt
gccatggcaatcaacccagcagaccagatgatcgcggtgcatgtgcgacctatctttgag
caagtctacaaccagttggcccaccagcggacactccccaccacgaccgcatcagatggc
accagcatccgtgtgatcatgcatgtaatcaactcggttctgcttagctacaagtga
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