Miscanthus floridulus: 136535364
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Entry
136535364 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP85-like isoform X1
KO
K14304
nuclear pore complex protein Nup85
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136535364
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136535364
03036 Chromosome and associated proteins [BR:
mflo03036
]
136535364
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136535364
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136535364
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
136535364
NCBI-ProteinID:
XP_066383747
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MPGMPTDGGGAIVPFTGEPGQGAPPVRPIRHGVAPPIFRTYVSWSSGNLLQVACLRPPNS
EGGGGTVEVVGSVVEVNLGDGGSGGSEAEEKIDEAEMRRIEYGSVPAFALLQSRKNSLAD
AATMSHVPSVPDHEEWWQYVLEYSKTIGNLLGNPDPPVFMIEDPMTILKFREKPTSLRAA
WELLEIFYVDKHLQGWLPERLVDWLADFDSLLSTMASTVYSKLSNFQKKLINLQIVEDDP
DYWNGLSAALSVGWLDIVVNMLRFHGSYQLDQMDNRETENGLVEAVAVLVSTMPRLRPNL
PTGKLGQCCKTRPDFIKAWEKWRGQVTKLECSAFWIQCGHQKTRDGLKNLLHIMMGNINK
LTDATSHWLELFASHFLYIKPFTVGFEGMHHLAQKCIQLKPSSGTNGLTGLILGVLSENT
EVVLAECTKNFGPWLVTHAMELLTADNDYADVMLHEERPNLGGISIEELHRLVYAQVLCS
HSLTWQIAPTYLSSCLNQGLGLLEILLLKQPIQDNCLVLKTLEICRLYELENVSTIIMKI
AGIYHWKHGRKGTGVYWFQQAHDKVCLDRIAQQLFEHIGKSVTDDSFKQWEGLLELLGSD
IGSAGGLEFLHRYRDFKRSLQQALDRRCGARQTVDFLIQLMKNPSTPQRFWLPLLHDSVE
LLNSKLSPLMNVAETTLLLNKLQELSMAKLRPDFSSYHLPSHAISSVRLALASNLARAIL
GDP
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgcctggtatgccgacggacggtggcggcgctatcgtaccttttacaggggagcctggc
caaggggcgccacccgtgcggccaatccgccacggcgtggcgccgcccatcttccgcacc
tacgtctcctggtccagcggcaaccttctgcaggtcgcgtgcctccgcccgccgaattcg
gaaggtggcggcggcacggtggaggtcgttgggagtgtggtggaggtgaatctcggagac
ggtggcagcggtggctcggaggccgaggagaaaattgacgaggcggagatgcggcggatc
gagtacgggtcggtgccggccttcgcgctgctgcagagcaggaagaactccctcgcagat
gctgctactatgtcgcacgtgccctcagtccccgatcatgaagaatggtggcaatatgtg
cttgagtacagcaaaaccattggcaatctccttgggaacccagaccctcctgttttcatg
attgaagaccccatgacaattcttaagtttagggagaaaccgacaagtttaagggctgct
tgggagttgttggagatattctatgttgataaacatttgcaaggctggcttcctgagcgt
cttgttgattggttagccgattttgacagcctgttgtcaacgatggcgagcacggtgtac
tctaagctcagcaatttccagaaaaaactcattaacttgcagattgttgaagatgatcct
gattactggaatggtttgtcagcagcactttcagttggatggcttgatattgttgtgaat
atgctacggtttcatggatcgtaccaattagatcagatggataaccgtgagacagaaaat
ggattggtcgaggctgttgctgttcttgtatcaacgatgccccgcttgagaccaaatttg
ccaactggtaaattaggccagtgctgcaaaacaagacctgattttatcaaggcatgggaa
aagtggcgaggtcaagtaactaaactggagtgcagtgcattttggatccagtgcggccac
caaaaaacccgtgatggtttgaagaatttgcttcatattatgatggggaacataaacaaa
ctcactgacgctacttcccattggctggagctgtttgcttctcattttctttacataaaa
ccatttacagtgggttttgaagggatgcaccatttagcacagaaatgcatacagcttaag
ccatcctctggcactaatggattaacaggcctcattcttggtgtcctttcagaaaataca
gaggttgtcttggcagaatgcacaaaaaattttggcccttggctggtcacacatgctatg
gaacttctgacagctgataatgactatgcggatgttatgttgcatgaagagcgacctaac
ttaggtggtataagcatagaggaactgcaccgtctagtctatgctcaagttttatgttct
cattctttaacctggcagattgcgcctacttatctgtcctcatgtctaaaccaaggccta
ggactcttggagattctacttctcaagcaacccatacaagataattgcctagtactcaag
actttggaaatttgccgattgtacgaactggagaatgttagtacaatcatcatgaagatt
gctggcatttatcattggaagcatggacgaaaaggaactggtgtatactggttccagcaa
gctcatgataaagtttgtcttgacagaattgctcaacagttgtttgaacacattgggaag
tcagtgacagatgatagctttaagcaatgggaagggctgctcgagctccttggttctgac
attggtagtgcgggcggtcttgagttccttcacaggtaccgggatttcaagaggtctctg
caacaagctctagacagaaggtgtggtgctcggcaaactgtggattttttaatacagctt
atgaaaaacccatccacaccgcaacgtttctggctaccccttctacatgactcggtggag
ctacttaatagcaaactcagccctcttatgaatgttgctgagacgacattgttgctcaac
aagctgcaagagctgtcaatggccaagctgcgccctgatttttccagttatcacctacca
agccatgcgataagctctgtgagattggctctggcatcaaatctggcacgtgccattctt
ggagacccgtag
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