Miscanthus floridulus: 136535575
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Entry
136535575 CDS
T10264
Name
(RefSeq) plant-specific TFIIB-related protein 1-like
KO
K03124
transcription initiation factor TFIIB
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136535575
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136535575
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
136535575
Prokaryotic type
Archaeal type
TFB
136535575
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Cyclin_C
TRAFD1-XIAF1_ZnF
HTH_Mga
Motif
Other DBs
NCBI-GeneID:
136535575
NCBI-ProteinID:
XP_066383969
LinkDB
All DBs
Position
2:164965525..164968266
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AA seq
532 aa
AA seq
DB search
MSSQCPYCRASGPARCATTQPPLSRAVSECSACARIVVERHLHTHPFFPLLPSLHPLPLV
TPDLATAVDPAPSPSPGDEDDEDPFLPAGFVSAFSAFSLERHPVLARSASTFSGLLAELE
RALAVDSAAAASNPDPAGPMVSVDSLRAYLQIVDVASILRLDRGIADHAFELFKDCSSAT
CLRNRSVEALATAALVQAIREAQQPRTLQEISTASNLPQKEIGKYIKILGESLKLSQPLN
SNSIAVHMPRFCSLLQLNKSAQELAAHIGEVVVNKCFCTRRNPISISAAAIYLACQLEDK
RKTQAEICKVTGLTEVTLRKVYKELLENWDDLLPPDYTPATPPEKAFPMTNIYSGRSASG
KDLYQDKIFESIKQKCPEPAEPDHMVIVKEEEDKKTIALGRPPTKPEAHELGKAFRPPNA
PFSTSPKSDRDKTETSVHGFNLNEVSCAMDSDRTDITMEPVFGDRSSNESNAIPSPNRQP
LPWQFKQGAPSTGPSYSRLREQQSGLDLVAALKGTGKRSAGDGGDGRDREGK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcagtgcccctactgccgcgcgtcgggtccggcgcggtgcgcgacgacgcag
ccgccgctctcgcgcgccgtgtccgagtgctccgcctgcgcccgcatcgtcgtcgagcgc
cacctccacacgcaccccttcttccccctcctcccctcactccatccgcttcccctagtc
acccccgacctcgccaccgccgtcgatcccgccccctccccctcccccggcgacgaagat
gacgaggaccccttcctccccgcgggcttcgtctccgccttctcggctttctccctcgag
cgccaccccgtcctcgcccgctccgcctccaccttctccggcctcctcgccgagctcgag
cgcgcgctcgccgtcgactccgccgccgcggcctccaacccggaccccgccgggcccatg
gtctccgtcgacagcctccgcgcctacctccagatcgtcgacgtcgcctccatactcagg
ctcgacaggggcatagctgaccacgctttcgagctcttcaaggattgctcgtccgcgacc
tgcctcaggaatcggagcgtcgaggcgctcgcgaccgccgcgctcgtacaggccatccgc
gaggcgcagcagccccggacgctgcaggaaatctctactgctagcaatcttcctcaaaaa
gagataggaaaatacatcaaaatactcggcgaatctctgaaactgagtcaaccacttaac
agcaactcaatagctgttcacatgccccgattttgcagcttgctccagctgaataaatct
gctcaggaacttgcagctcatattggtgaggtggttgttaataagtgcttctgcacacgg
cggaatcccataagtatatctgctgctgctatctaccttgcatgtcagcttgaagacaaa
cgcaaaactcaggcagagatatgtaaggttacgggcctcacagaggtcacactacgcaaa
gtgtacaaagaactgttggagaattgggatgatttgctcccccctgactatacacctgcc
acaccaccagagaaagctttccccatgaccaacatttactcagggcgctcagcaagtggc
aaggatctgtatcaggataagatattcgagagtattaagcaaaaatgccctgagcctgca
gagcctgaccacatggtcatcgtgaaagaagaggaagacaagaaaacgattgctcttggt
cgtccacctacaaaacctgaggctcatgagttaggcaaggcgttccggccaccaaatgcc
cctttctcgacgtctcctaaatctgatcgtgacaagacggaaactagcgttcatgggttc
aaccttaatgaggtatcatgtgcgatggattctgatagaacagacatcacaatggagcca
gttttcggtgatcgatcgtcgaatgaatcgaatgcgattccatctcccaacaggcagcct
ttaccgtggcagtttaagcagggggcaccttcaactggtccatcatattcaaggcttcgc
gagcagcagtcgggcctggatcttgtagctgctctgaaggggactgggaaaaggagtgct
ggggatggtggtgatggccgggatagagaagggaagtga
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