Miscanthus floridulus: 136535748
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Entry
136535748 CDS
T10264
Name
(RefSeq) DExH-box ATP-dependent RNA helicase DExH1-like isoform X1
KO
K14442
ATP-dependent RNA helicase DHX36 [EC:
5.6.2.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
136535748
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
136535748
Translation factors [BR:
mflo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136535748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136535748
NCBI-ProteinID:
XP_066384229
LinkDB
All DBs
Position
1:69574839..69585222
Genome browser
AA seq
1035 aa
AA seq
DB search
MLHSSACRGSRLLSSCSSSGGSSQFLLSRFASTPLKTLGALRTLAVMSYRGGRGGGGPNS
HRGRGRGGGGGRGGRGSGGGRGEQRWWDPEWRAERLRQMHGEVEKVDENEWWNKIGQLRE
GSQQELVVKRNFGRDGQNILANMAQRQGLYFNAYNRGKTLVFSKVPLPDYRADLDDRHGS
TQKEIKMSNQTEARVEDLLSRSKWNTNNSASTSTVSMRQFLPSASSSVVEPAAPIDKEKL
SSQLRDLQNSRKITASARSMQSFREKLPAFSMREEFLKAVAANQVLVISGETGCGKTTQL
PQFILEEEINNLRGSDCSIICTQPRRISAVSVAARVAAERGEELGKAVGYQIRLESKRSA
QTRLLFCTTGVLLRRLVQEPDLIGVSHLLVDEIHERGMNEDFLIIILRDLLPRRPDLRLV
LMSATINAELFSKYFGDAPVMHIPGFTFPVAELFLEDVLEKTRYRINSERDNFAGSSRRK
RFSSVKSDPLSDVFENIDINKEYGNYNITTRQSLEAWSAAELDLGLVESTIEYICRYEAE
GAILVFLTGWDEISKLLDKIKGNNFLGSPNRFLVLPLHGSMPTVNQREIFDRPPASMRKI
VLATNIAESSITIDDVVYVIDCGKAKETSYDALNKLACLLPSWISKASAHQRRGRAGRVQ
PGFCYRLYPKIIHDAMQQFQLPEILRTPLQELCLTIKSLQLGAVSSFLAKSLQPPDPLSV
KNAIELLKTIGALDDTEELTSLGTHLCTLPLDPNIGKMLLMGSVFQCLDPVLTIAAALAY
RNPFVLPIDRKEEADAVKRSFAGDSCSDHIALLKAFVAWKEAKRSGRERTFCWENFLSPM
TLKMMDDMRNQFFDLLSDIGFVSKTTGVKAYNHYGNDLEMICAVLCAGLYPNVVQCKRRG
KRTAFYTKDVGKVDIHPSSVNAFINQFPLPFLVYSEKVKTASIYVRDSTNISDYALLLFG
GSLSPSKTGEGIEMLGGYLHFSAPKRTIELIQKLRGELDKLLQKKIEEPGLDIFSQGKGV
VAAAVELLHSQNFNH
NT seq
3108 nt
NT seq
+upstream
nt +downstream
nt
atgctccactcttctgcctgccgcggcagccgcctcctctcctcttgcagcagcagcggc
ggcagcagccagttcctcctctcccgcttcgcgtccacccccctcaaaaccctaggtgcg
ctcaggaccctagctgtcatgtcgtaccgcggagggcgcgggggcggcgggcccaactct
caccgcgggcgcgggcggggcggtggcggaggcaggggaggccgcggcagcggcggggga
cgcggggagcagaggtggtgggaccccgagtggcgcgccgagcgcctccggcagatgcat
ggggaggtggaaaaggttgatgagaatgaatggtggaacaagattgggcaattaagagaa
gggtcccagcaggagctagtagtcaagcggaattttggacgggatggacagaatatactt
gcaaacatggctcagagacaagggctttactttaatgcatacaacagagggaagacactt
gttttcagcaaggtaccgttacctgattatcgagcagatctggacgacaggcatgggtca
acacaaaaagagattaagatgtctaatcagacagaggcgcgagtcgaagaccttttgtcc
aggtcaaagtggaacaccaacaattctgcaagcacatctaccgtctcaatgagacaattt
ttgcctagcgcgtcctcgtctgttgttgaaccagcagcaccaattgataaagaaaagctc
agttctcagcttagggatttgcagaattcaaggaagataacagcaagtgctagatcaatg
caatctttcagggagaaattacctgcattcagcatgagagaggaatttctgaaagcggtg
gcagccaatcaggttctggtcatttctggcgagacaggctgcggtaaaacaacccagctt
ccacagttcatcctagaagaagaaataaataacctccgcggttctgattgcagcataatt
tgtactcaaccccgccgtatatctgccgtttcagtagcagcaagagtagctgctgagaga
ggtgaagaacttggcaaggctgttggataccagattcgccttgaatcaaaacgatctgca
caaacacggttgctgttctgcactaccggagttttgcttagaagactggttcaagagcct
gacttaattggggtgagtcatttactagttgacgaaattcatgaacgtggcatgaatgaa
gattttctcatcataatactgcgtgaccttctaccaagacgtccagatcttcgccttgta
ctgatgagtgcaactataaatgctgaactattttccaagtactttggagatgctccagtg
atgcacatcccggggttcacttttcctgttgctgagttgtttctggaagatgttctagaa
aagactcgttacaggatcaattccgaacgtgataattttgcaggtagttcaaggagaaag
aggttttcatcagttaagagtgatccactatctgatgtttttgagaacattgacattaat
aaggagtatggaaattacaacattacaacaaggcagtcccttgaagcttggtctgctgct
gaactagatttgggccttgtggaaagtacaatcgagtatatttgccgttatgaagcagaa
ggtgcaatccttgtgttccttactggctgggatgaaatttcaaagcttctggacaagatt
aaagggaataatttccttggcagtcctaatagatttcttgttcttcctttgcatggttct
atgccaactgtgaatcaacgtgaaatttttgacagaccaccagctagtatgagaaaaatt
gttttggcaaccaacattgcggagagtagtatcactatagatgatgttgtctatgtgatt
gattgtggtaaggccaaggagacaagctatgatgccttgaataagctggcatgccttctt
ccgtcatggatatcaaaagcttctgctcatcagaggagaggtcgtgcaggccgcgttcag
ccaggcttttgctatcggctctatccaaagatcattcatgatgcaatgcaacagtttcag
ttgcctgaaattctcaggactcctttgcaagaactatgccttaccatcaaaagcttacag
cttggagcagtatcctcctttttagccaagtcactgcagccaccagatccactttctgtt
aagaatgcaattgagcttcttaaaaccattggtgcactggatgatacggaggaactcact
tctctcgggacacatctctgtactctcccactggacccaaacattgggaaaatgctgctt
atgggatctgtattccagtgcttggatccagtattgacaattgctgctgctctcgcatat
cgtaatccatttgtgctcccaatagatagaaaagaagaagctgatgctgtcaaaagatca
tttgctggtgactcctgcagtgaccacattgctcttcttaaggcgtttgtagcatggaag
gaggctaaaaggagtggtagagagcgcactttctgttgggaaaattttctgtcccccatg
accctgaagatgatggatgacatgcgaaatcaattttttgatctactatctgatattggg
tttgttagcaagacaacaggagtgaaggcatataaccactatggtaatgatctggagatg
atttgcgctgttttatgcgctgggctttacccaaatgttgtgcaatgcaaaaggcgaggc
aagaggactgctttctacaccaaagatgtggggaaagtggatattcatccatcatcagtc
aatgcattcataaaccaattcccattacctttcttggtttatagtgagaaggtgaagact
gctagcatttatgtaagggactcgacaaatatatcggactatgcccttctactttttggt
ggttcgcttagtccaagcaaaactggagaaggcattgagatgcttgggggttatcttcat
ttctcggctccaaagcgtaccatagagttgattcagaaattaagaggtgaattggacaaa
ctccttcagaaaaagattgaggaaccgggacttgacatcttttcacaaggaaagggtgtc
gtggcggcagctgtagaactgttacacagtcaaaatttcaaccattag
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