Miscanthus floridulus: 136535930
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Entry
136535930 CDS
T10264
Name
(RefSeq) protein spotted leaf 11-like
KO
K27628
U-box domain-containing protein 12/13/14 [EC:
2.3.2.27
]
Organism
mflo Miscanthus floridulus
Pathway
mflo04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
136535930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136535930
Enzymes [BR:
mflo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
136535930
Ubiquitin system [BR:
mflo04121
]
Ubiquitin ligases (E3)
U-box type E3
136535930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
U-box
ARM_ARMC5
MLKL_N
Arm_2
KAP
Neurochondrin
zf-Nse
ArlS_N
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
136535930
NCBI-ProteinID:
XP_066384471
LinkDB
All DBs
Position
2:complement(180659737..180664880)
Genome browser
AA seq
723 aa
AA seq
DB search
MDDEAKSVPTSDMNTDAAAEAEAAAAPLPPSSSETAEREEAKVEEADEEGQVVERLVELV
SEIAAISDFRNSYRRQFCNLSRRIRLLVPMLEEAKEAPSPLPVASEAALRRLRDALHAAR
ELLRLGSCGSKIFLVLDREKIMKTFQDVTARLEQALAGISFDELNISDEVREQVELVHTQ
FKRAKERSDSSDDDLFNELMSLYNSSSSASVDPDILQRLSEKLQLVTIYDLNHESLTLHE
MARGGDPGAVVEKMSVLLKRIKDFVQTEDPEMGAQASTANISPKDNSTHPVIPVDFRCPI
SLDLMNDPVIVATGQTYERGYIEMWLEAGHDTCPKTQQKLANKSLTPNYVLRSLITQWCE
ANGIEPPKRAAQFKDAPLPCSATEHSNVLELLQKLSSQNLEDQCGAAGMLRQLAKRSAEN
RACIGDAGAIPILVSMLSTTDVSTQEHVVTALLNLSIYEENKARIISSGAVPGIVHVLKR
GSMEARENSAATLFSLSIVDENKVTIGCSGAIPALVQLLSNGSQRGKKDAATALFNLCIY
QGNKGKAVRAGLVPILLELLMETECGMVDEALAILAILSGHPEGKAAIGAASAIPVFVGV
IRNGSPRSKENAAAVMVHLCNGEGEQQQQHLAEGQEQGIVSLLEELAESGTDRGKRKAVQ
LLERMDRFLKQQSQAQAEAEAMAQAHAQAQAQAQPRILVQAQAHADMQAERSLILISSDI
SDR
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgaggcaaagtctgttcctacatcggacatgaacaccgacgctgccgcggaa
gccgaggcggccgccgctccgctgccgccctcgagctcagagacggcggagagggaggag
gcaaaggttgaggaggcggatgaggagggccaggtggtggagcggttggtcgagctggtg
agcgagatcgcggccatctcggacttcaggaactcgtaccggcggcagttctgcaacctg
tcgcggcggatccggctgctcgtgcccatgctggaggaggccaaggaagccccctcgccg
cttccggtggcgtcggaggccgcgctacggcggctcagggacgcgctccacgccgccagg
gagctgctccggctcggcagctgcggcagcaagatcttcctggttcttgatagagagaaa
ataatgaagactttccaggacgtcacagcaagacttgaacaagccttagctggtatctcg
tttgatgaacttaatatatctgatgaagtaagagagcaggttgaattggtgcatactcag
ttcaaaagagctaaggaacgatcggattcatctgatgatgatctttttaatgagctgatg
tctctctataattcaagcagcagtgctagtgttgacccagatattcttcaaaggttatct
gagaagttgcagcttgtcacaatatatgacctcaatcatgaatctctgaccttgcatgag
atggctagaggcggtgatcctggtgcagttgttgaaaagatgtcagtgctcctcaaaagg
attaaggattttgtgcagacagaagaccctgagatgggtgctcaagcaagtacagcaaac
atttccccaaaagacaactcaacacatcctgttattcctgttgatttccgttgcccaata
tcactggatttaatgaatgaccctgttattgtcgccactgggcagacttatgagcgaggg
tacatagagatgtggctggaggctggccatgatacctgtccgaagacacagcagaagctt
gccaataaatccctgactccaaattatgttctacgtagcctcataactcaatggtgtgag
gcaaatggtatcgaacctccaaaacgcgctgctcaatttaaggatgcaccattgccatgt
agtgctactgagcatagcaatgttcttgagcttcttcagaaactgtcatcccaaaacctt
gaagatcaatgtggcgctgctggtatgcttcgtcagcttgccaagcgcagtgctgaaaat
cgtgcttgtattggagatgctggtgctattcctattcttgttagtatgctatcaaccact
gatgttagcacccaggaacacgtggttactgctctcttgaatctttccatctatgaagag
aacaaggcaaggataatctcttctggagctgttcctggaattgtgcacgtattaaagagg
ggcagcatggaggctcgggagaattcagctgccacactgttcagcttatctattgtagat
gagaacaaggtgactattgggtgttctggggcaattcctgcgcttgtgcagctattgagt
aatggaagccaacggggtaaaaaggatgcagcaacagcactatttaacttgtgtatttac
cagggtaacaaggggaaagctgttagagctggattggtacctatactactagaactactc
atggagactgaatgtgggatggtagatgaggcccttgcaatattggcaatcctctcaggc
caccctgaggggaaggcagctattggcgctgcttctgcaatacctgtatttgttggagtt
atcagaaatggatctccaaggagcaaggaaaatgctgctgctgttatggtgcatctatgc
aatggcgaaggcgaacagcagcaacagcatcttgctgaaggacaagagcagggcatcgtg
tctttgctggaggagctagcagaaagtggcacggacagaggaaagaggaaagctgtgcag
ctgctcgaacgaatggatcggttcctaaagcagcagagtcaagcccaagctgaagcagag
gccatggcacaggctcatgcgcaagcacaagcacaagcgcagcctcggatcctggttcaa
gctcaagcacacgcagatatgcaagctgagcgatcactaattctcatttcatcagatatt
tctgatagatga
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integrated database retrieval system
