Miscanthus floridulus: 136536601
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Entry
136536601 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136536601
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136536601
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136536601
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
136536601
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
136536601
NCBI-ProteinID:
XP_066384938
LinkDB
All DBs
Position
2:complement(58061544..58098292)
Genome browser
AA seq
1200 aa
AA seq
DB search
MRGKGRGRDARSIGKARSDRRQRISRRRRPVAKEGDYSALRELFRPHVESFDYFLDKGLD
EMIQSIRPMVIRDPNSNNTLKIILEKGHVLSPMRDARSGVLPLYPQECRQARITYHGEFK
VDVCFQYNEGAQIRHTFNFGHLPIMLMSKLCHLRGADPHKLVFHGEEATEMGGYFICGGM
ERLVRILILQKRNYPMGLVRSSFLKRGAGYTDKAVVIRCVQRDQSSVSIKLYYLQNGSAR
LGFWLGGREFLLPVGIVLKALIDASDREIFTSLTCCYSDKHGKGKGVVSTQLIGERAQIV
LDEVRNQSLFTRTQCLVHIGQYFRSVMEGFEKDDYETVAEAVLKDYIFVHLENNHDKFNL
LIFMLQKLYALVDQTASPDNADALQYQEALLPGHLITIFLKDRLQDWLRKSKRLIIEEAA
KNKGFDLGNALEIRKFLTKYTTSVGRAIESMIKVGKVNSQSGLDLPQRDGMTIQAERLNF
HRYISHFRSVHRGSAFAKMRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTSTCRISS
FYSSEGVVKXFGEMKKLLSAELVHVGMNPVLPKIERTGPPEVLHVHLDGCILGTIASATI
DKAVNYLRTLKLLAHSGIPEDLEVGYVPLSFSGAFPGLYLFTNPARFVRPVRNLFILSDG
KQSIELIGPFEQAFMEIRCPDGGDGGRQEKFPATHEEIHPTAILSVVANLTPWSDHNQSP
RNMYQCQMAKQTMGFCGQALKFRTDVKAFHLQTPQTPIVRTGTYNKYYMDEFPSGTNAIV
AVLAYTGYDMEDAMILNKSAVDRGMFRGHIYQTECIDLSTKSRDNVPETFAKSVLSRDTR
TAIDSDGLPRLGQAVHPNEQYYSVHNSLTGVIRPVRLKGTEPAFIDYVAVNGAGSKRGLQ
KANIRLRRVRNPIIGDKFSSRHGQKGVCSQLWPDIDMPFSANTGMRPDLIINPHAFPSRM
TIAMLLESMAAKAGSLHGKFIDATPFANSLKQDKDPRKPNSIVDELGPMLASYGFNYHGK
EVLYSGVFGTEMDCEIFIGPVYYQRLRHMVSDKFQVRTTGRIDQITRQPIGGRKHGGGIR
FGEMERDALLAHGSSYLLHDRLHSCSDYHIADVCSFCGSLLTATMIRSDTQKKAKHEMLG
LSTVRPPKNFACQACKTSKGMETVAMPYVFRYLAAELAAMNIKLDLRLSNKSGLPPSQES
NT seq
3603 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgggaaggggaggggacgggacgccaggagcatcggcaaggcgaggagcgaccgc
cgccagcgaataagtcgccgtcgccggccggtggccaaggaaggcgactactcggcgttg
cgggagctattccggccgcacgtggaatcctttgattacttcctcgataaggggctcgac
gagatgattcaatccatccgccccatggtgatcagggatcccaactccaacaacacacta
aaaataatcttggaaaagggtcatgtgctctcgccgatgagggatgcccggtcgggtgta
ctacccctctacccccaggagtgcaggcaagcaagaattacatatcacggggaatttaaa
gtcgatgtctgctttcagtataatgaaggggcacaaatcaggcataccttcaattttggc
catttgcctattatgttgatgtcaaaactgtgtcatctgagaggtgctgatccccataaa
ttagttttccatggtgaagaggcaactgaaatgggcgggtacttcatatgcggcgggatg
gagagacttgtgcgtattcttattttacaaaagcgtaactatcctatgggattggtacgc
agttcttttcttaaacgtggtgctggatacactgacaaagcagtggtcataagatgtgtc
caacgtgaccagtccagtgtgtcaataaagttgtattacctccaaaatggaagtgcaagg
cttgggttttggttgggtggcagagagtttctgcttcctgttgggattgttctcaaggcc
cttattgatgcaagtgaccgggaaatctttacaagcttgacttgctgctacagtgataaa
catggaaaaggaaagggagttgtcagtactcaactaattggtgaaagggcacaaatagtt
cttgacgaagtcagaaatcagtcccttttcactcgcacacagtgtttggtgcatattggg
caatacttccgatctgtgatggaaggatttgaaaaagatgactatgaaactgttgctgaa
gcggttctaaaggactatatttttgtgcacttggaaaacaaccatgataaatttaatcta
ttgatatttatgctgcagaaactttatgctctcgtagatcaaactgcttcacctgacaat
gctgacgcactacaataccaggaggctctattgcctgggcacttaatcacaatttttctg
aaggataggcttcaggattggctaagaaagtctaagcgtttaatcattgaagaggctgca
aagaacaaaggttttgacctcggtaatgcactggagataaggaaatttctaactaaatat
acaacatctgtcggtagagctatcgagagtatgataaaggttgggaaagtgaattcacaa
tcaggattggatcttccacagagagatgggatgaccattcaagctgaacggctcaacttt
catcgttatatctcacacttccgttctgttcataggggctctgcttttgctaaaatgcgt
acaacatctgttagaaagttactcccagaatcatggggtttcctgtgtccagttcataca
cctgatggagagccttgtggtttactgaatcatatgacttctacatgccgtatttcatcg
ttctacagctcagaaggggtggttaaanattttggggaaatgaagaagttgctttctgct
gagttggttcatgttggaatgaacccagtgttaccaaagattgagcgaactggtccccca
gaagtactccatgtccatttggatgggtgcattcttggtactattgcttctgctacgatt
gacaaagcagttaattatcttcgtacattgaaacttctggcacactcagggattcctgaa
gacctggaagttggttatgtcccacttagttttagtggagcttttcctggcctgtacctt
tttacaaatccagctagatttgttcgacctgtcagaaatcttttcattctatctgatgga
aagcaaagtattgagctcattggaccatttgaacaggcatttatggagatacggtgtcct
gatggtggggatggtgggagacaagaaaaatttcctgcaactcatgaagagatccaccct
acagctattctcagtgtagttgccaatttgacaccttggtctgatcacaaccaaagtcct
aggaacatgtaccaatgccagatggcaaagcaaaccatgggtttttgcggacaagctcta
aaattccgtactgatgtaaaggcattccatctgcagacccctcagacaccaattgttcgg
acaggtacatataacaaatattatatggatgaatttccatctggaacgaatgctattgtt
gcagtgctagcatacacaggttatgacatggaggatgccatgattttgaataaatcagct
gttgatcgtggaatgttccgtggacatatttaccagactgaatgcattgacctatcaaca
aaaagcagagataatgttccagaaacctttgcaaagagtgtattatccagggacacaagg
actgcaattgattcagatggtcttcctcgacttggacaggctgtacatccaaacgagcag
tactatagtgtccataatagccttacaggcgtgataaggcctgtcagactaaaaggcaca
gaaccagcatttattgactatgttgctgtcaatggggcaggctcaaaacgtggcctgcag
aaggcgaacattcgtttacgtcgtgtgagaaaccctataatcggtgacaagttcagcagc
cgacatgggcagaagggtgtttgctctcagttgtggcctgacattgacatgccattctct
gcaaatactggcatgagaccagatctaatcattaatcctcatgcatttccttcaagaatg
actatagcaatgcttttagagtctatggcagccaaggctggaagtctacatggaaagttc
attgatgcaacaccttttgcaaactcactcaaacaggacaaggatccccgcaagcctaat
tcaattgtggacgaattgggtcccatgcttgcatcttatgggtttaattatcatggaaaa
gaggtcctttatagtggagtttttggcactgagatggactgtgagattttcatcggacct
gtttattaccagcgtcttcgtcatatggtctcagataaattccaggtccgcactactggt
cgtatagaccagataacaagacaacccataggaggaaggaagcatggtggagggatccga
ttcggcgagatggagcgtgatgccctccttgcccatgggtcttcctacctcttgcatgac
aggctccactcctgctcggactaccacatcgcagatgtgtgctccttctgtgggagcctg
ctgactgcgacaatgatcagatccgatacccagaagaaagccaagcacgagatgcttggg
ctctccactgtgagaccgccaaagaactttgcatgccaggcctgcaaaacaagcaagggg
atggagaccgtggcgatgccgtatgtgttcaggtacctggctgctgagctggctgccatg
aacataaagctggacctccggttgagcaacaaatcaggattgcctcccagccaagaatca
tga
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