Miscanthus floridulus: 136537777
Help
Entry
136537777 CDS
T10264
Name
(RefSeq) polygalacturonase ADPG1-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mflo Miscanthus floridulus
Pathway
mflo00040
Pentose and glucuronate interconversions
mflo01100
Metabolic pathways
Module
mflo_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
136537777
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
136537777
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
NosD
Pectate_lyase_4
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
136537777
NCBI-ProteinID:
XP_066385841
LinkDB
All DBs
Position
2:complement(6593961..6595507)
Genome browser
AA seq
443 aa
AA seq
DB search
MVSSRKLMKLVFMVPLLAMLFMSSTLEAARASNGTSADGTNHLHSPRVNGSAAAPRGRSL
ASPSSQSVFSVDRYGARGDGSHDDTQALARAWKAACASPRPAVVLIPGGRLYLLKLVTLQ
GPCKSSVTLTVKGTLVASPNRADWSDKDRRHWIVFRSVNKLTVNGGGAIDGNGEKWWPHS
CKINKALPCKEAPTALSFHYCTNLRVEDLRIVNSQQIHMSVEDCTNVLLARLSITAPGTS
PNTDGIHITRSKDVHVTNCKIKTGDDCMSIENGTRNLHVSKVVCGPGHGISIGSLGDDNS
RAEVSGIVIDSVQLYGTTNGARIKTYQGGSGYAKDITFQNMVMYDVKNPIIIDQNYCDKA
TPCGEQRSAVQVSNVVFKNIRGTTITKEAIKMNCSKNVPCQGITLQNINLKMQGGKGDTQ
STCENAKWRKFGTVHPQPCTDKS
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggtatccagcaggaagctgatgaagcttgtgttcatggtgcctctcctcgcgatgctc
ttcatgtctagcactcttgaggctgcaagagcgagcaatggcacctcggctgacggcacg
aaccacttgcacagccctcgcgtcaatggatccgccgccgcgcccaggggcaggtcgctg
gcgtcgccgtcgtcgcagagcgtgttcagcgtcgaccgctacggcgcccgcggcgacggg
agccacgacgacacgcaggcactggccagggcgtggaaggcggcatgcgcctcgccacgg
ccggccgtcgtgctcatccccggcggcaggctctacctgctcaagctcgtcactctccag
ggcccgtgcaagtccagcgtcacgctcacggtcaagggcaccttggtagcgtcgccgaac
agggcggactggagcgacaaggacaggaggcactggatcgtgttccgaagcgtcaacaag
ctcaccgtcaatggcggtggcgccatcgacggcaacggcgagaaatggtggccacactca
tgcaagatcaacaaggctttgccgtgcaaggaagctccaacggctttgtcattccactac
tgcaccaatctgagagtggaggatctgagaattgtgaacagccaacagatccacatgtca
gtcgaggattgcaccaatgtgctactggcgcggttgtccatcacagcgcctggcacgagc
cctaacactgacggcatccacatcactcggagcaaggatgtacacgtcacaaactgcaag
atcaagacaggtgatgattgcatgtcaatcgagaacgggactcgtaatcttcatgtctcc
aaagttgtttgtggtcctggacatgggattagtattggaagcttaggagatgacaactca
agagctgaagtctctggcattgtcatagattcagtgcaactatatggcacaaccaatgga
gcacgcatcaagacataccaaggaggaagtggatacgccaaggacatcacgttccaaaac
atggtcatgtacgacgtcaaaaacccgataatcatcgaccagaactactgtgacaaggct
acgccatgcggagagcaaaggtcagcagtgcaggttagcaatgttgtcttcaagaacatc
agagggacaaccatcaccaaggaagctatcaagatgaactgtagcaagaatgtcccatgc
caaggcattaccttgcaaaacatcaatctaaaaatgcagggcggcaagggcgacacacaa
agcacatgtgaaaatgcaaaatggagaaaattcgggactgtacacccacagccctgcact
gacaaaagctag
DBGET
integrated database retrieval system