Miscanthus floridulus: 136537967
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Entry
136537967 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP58-like isoform X1
KO
K14307
nucleoporin p58/p45
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136537967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136537967
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136537967
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_FG2
MG280
Motif
Other DBs
NCBI-GeneID:
136537967
NCBI-ProteinID:
XP_066386042
LinkDB
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Position
2:13106761..13110979
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AA seq
577 aa
AA seq
DB search
MPGLALDLNLDPDLQAACRRLSYRGAYSPSSPRSPPLPTIDESPEEEPTPPPTSPRTTGA
LYPAPGETLTPTVGEPVATSLSLAPPGQSQSQQAQEAAAATRMLEQRRHEEERAAFAEYQ
RPAPGETLAPTVGAPVSTWLALAPPAPSQSQQAQEAAAAAAQRMLEQRWNEEEHASFAEY
QRQRQQALAAEAGLQQALASQQLMLYTVDGRATSYETKWDELHPFSQGLLLQIEDRIREH
RDDSEQLDQCRRFDDLSLCNMSFELDANQITQEAVFISTIMNRDKNSIDSLMTVIQEIMW
NTEFAIRSYAKLRPRFVYLSAESAKSGFSNHSGSSGAQTDFHQLLTMTPRFHCYSSATRR
PSPFVQQTVARFEDDLGECCKWILELEQLVQMKDGKTFAESLESLSNVMSNVHDYLIHVA
SKVEHFHQYVETMETQYLNDRRRRGDLSNPFLKANRREAAKQEATDRIIHPMLHLTSPGQ
PTRLVAAPMIASQLQRTPFPTVATSPTSYPTVPLPSVLPPSSTQTSPAPSINPFSSSGPV
LQSMPAASLFRTGIPSSATSLFPVPSGGIRHMLYASG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgcctggcctcgccttggacctcaacctggaccccgacctgcaggccgcgtgcaggcgc
ctcagctaccgtggcgcctactccccctcgtccccgaggagcccgcctctcccgacgatc
gacgagagccccgaagaggaaccgacgcctcctccgacatctccgcggacgaccggggcg
ctatacccggcgccgggagagacgctgacgccgacggtcggtgagcccgtggcgacttcg
ctttcccttgcgcctcccgggcagtcgcaatctcagcaagcgcaggaggcggcagcggcg
acgaggatgttggagcagcggcgtcacgaggaagagcgcgcggcatttgcggagtatcag
cggccggcgccgggagagacgctggcgccgacggtcggtgcgcccgtgtcgacttggctt
gccctcgctcctcccgcgccgtcgcaatctcagcaagcgcaggaggcggcagcggcagcg
gcgcagaggatgttggagcagcggtggaatgaggaagagcacgcgtcgtttgcggagtat
caacggcaacgccagcaggcattggccgcggaggcgggattgcagcaagccttagcgtcg
cagcagctgatgctgtacacggtggacgggcgtgccaccagctacgagaccaagtgggac
gagcttcacccgttctcccagggtctgctgcttcaaatcgaggacagaattagggagcat
agggatgatagtgagcagttggatcaatgcagacgctttgatgacctatcactgtgcaac
atgagttttgaactcgatgctaatcagattactcaggaggctgtatttatctctaccatc
atgaatagagataagaattccattgatagcttaatgactgttatccaagaaattatgtgg
aacacagaatttgctatacgttcatatgcaaagttgaggccaaggtttgtctatctaagc
gctgaaagtgcaaagtctggtttttcaaatcactctggatcttctggtgctcagactgat
ttccatcagctcttaaccatgacaccaaggtttcattgttatagtagtgctaccaggcgg
ccatctccttttgtgcaacaaacagttgccaggtttgaggatgatcttggtgaatgctgc
aaatggattctagaactagagcaacttgtccaaatgaaggatggcaagacctttgcagaa
tctttggaatctctgtcaaatgttatgtctaatgtccatgactatctaatccatgtggcg
tctaaggtggaacatttccatcagtatgttgaaacaatggaaactcagtatctgaatgat
cgacggcgcaggggtgatttgagtaatccttttctcaaggcaaatagaagagaggcagct
aaacaagaagcaactgacagaataatccatccgatgttgcatctaacatctccaggccag
ccaacaaggctggtcgctgcgccaatgatagcaagccaactacagcgaactccattccct
actgtagcaacttctccaacctcttatccaactgttccactgccttctgttttgcctcca
tccagcacacagacaagtcctgctccatcaatcaaccctttcagttcatccggacctgtg
ttgcaatccatgccggcagcatctttgttcaggactggtatcccatcttctgctacttca
cttttcccagtaccatctggaggtatacgtcacatgctatacgcaagcggatag
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