Miscanthus floridulus: 136538025
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Entry
136538025 CDS
T10264
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB2-like
KO
K03010
DNA-directed RNA polymerase II subunit RPB2 [EC:
2.7.7.6
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03020
RNA polymerase
mflo03420
Nucleotide excision repair
Brite
Enzymes [BR:
mflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
136538025
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136538025
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136538025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136538025
NCBI-ProteinID:
XP_066386141
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All DBs
Position
1:8360210..8368134
Genome browser
AA seq
1224 aa
AA seq
DB search
MEDDEYEEGMEMGYGGHHQHGGGHAEEDDEMGYGGGGDGDEMEEAADGDPEQQEEITQDD
AWAVISAYFEEKGLVRQQLDSFDEFIQNTMQEIVDESADIEIRPESQHNPGRQAEFAETL
HKISFGQIYLSKPMMTEADGETATLFPKSARLRNLTYSAPLYVDVSYRVMKKGHDCEEVT
ETAEYPKVFIGKVPIMLRSSYCTLYQQSEKDLTELGECPYDQGGYFIINGSEKVLIAQEK
MSTNHVYVFKKRQPNKFAYVAEVRSMAENQNRPASSMFVRMLSRAGAKGGSSGQYIRATL
PYIRADIPIIIVFRALGFVADKDILEHICYDFSDTQMMELLRPSLEEAFVIQNQQVALDY
IGKRGATVGVTREKRIKYAKEILQKEMLPHVGVGEFCETKKAYYFGYIIHRLLMCALGRR
AEDDRDHYGNKRLDLAGPLLGGLFRMLFRKLTRDVRSYVQKCVDNGKEVNLQFAIKAKTV
TSGLKYSLATGNWGQANQAGTRAGVSQVLNRLTYASTLSHLRRLNSPIGREGKLAKPRQL
HNSHWGMMCPAETPEGQACGLVKNLALMVYITVGSAANPILEFLEEWGTENFEEISPAVI
PQAAKIFVNGCWVGIHRNPDLLVKTLRRLRRQIDVNTEVGVVRDIRLKELRLYTDYGRCS
RPLFIVEGQRLLIKKAHIRALQQRETPDEGWHELVSKGFIEYIDTEEEETTMISMTISDL
QNASHNPEDAYSGTYTHCEIHPSLILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGIYVT
NYQLRMDTLAYVLYYPQKPLVTTRAMEHLHFRQLPAGINAIVAIACYSGYNQEDSVIMNQ
SSIDRGFFRSLFFRSYRDEEKKMGTLVKEEFGRPNRENTMGMRHGSYDKLDDDGLAPPGT
RVSGEDVIIGKTSPIPQDDAQGQASRYSKRDHSTSLRHSESGMVDQVLLTTNADGLRFVK
VRMRSVRIPQIGDKFSSRHGQKGTVGMTYTQEDMPWTIEGITPDIIVNPHAIPSRMTIGQ
LIECIMGKVAAQMGREGDATPFTDVTVDNISKALHTCNYQMRGFETMYNGHTGRKLTAMI
FLGPTYYQRLKHMVDDKIHSRGRGPVQILTRQPAEGRSRDGGLRFGEMERDCMIAHGAAF
FLKERLFDQSDAYRVHVCEKCGLIAIANLKKNSFECRGCKNKTDIVQVHIPYACKLLFQE
LMAMAIAPRMLTHDMKTGKDQKKR
NT seq
3675 nt
NT seq
+upstream
nt +downstream
nt
atggaggatgacgagtacgaggaggggatggagatgggctacggcgggcatcaccagcac
ggcggcggccacgcggaggaggacgacgagatggggtacggcggcgggggggacggggac
gagatggaggaggcggcggatggggaccccgagcagcaggaggagatcacgcaggacgac
gcctgggccgtcatctccgcctacttcgaggagaagggcctcgtgcgccagcagctggac
tctttcgacgagttcatccagaacaccatgcaggagattgtcgatgagtccgccgacatc
gagatccgccccgagtcgcagcacaaccccggccgccaggccgagtttgccgagactctg
cacaagattagctttggtcaaatttatctcagcaagccaatgatgactgaagccgatgga
gagacagctactttatttccaaaatcagcaaggctcaggaacttgacatactctgcacca
ctgtatgttgatgtgtcatacagagtaatgaagaaaggacatgactgtgaagaagttaca
gagactgcagagtatccaaaagtgtttattgggaaggttccaatcatgttgcgttctagt
tactgcacactgtatcaacaatctgagaaggatctcactgaacttggggagtgtccttat
gaccaaggtggttatttcattatcaatggaagcgaaaaggttcttattgcccaggagaag
atgagcaccaaccatgtctatgtttttaagaagaggcagcctaacaaatttgcatatgtg
gctgaagtccgttccatggctgagaaccagaacagaccagccagcagcatgtttgtacgg
atgctttcgcgagcaggagcaaaagggggatcatctggtcaatatatccgtgctactctg
ccttatattcgtgcggacattcccattatcattgtatttcgagcattaggatttgttgcg
gacaaggatatactggagcatatatgttatgacttttctgatacacaaatgatggaattg
ctacgcccctccctggaggaagcttttgtcattcaaaatcaacaggttgctctggactac
attggaaaacgtggcgcaacagttggtgtcactcgagaaaagagaattaaatatgcaaag
gaaatacttcaaaaggaaatgttgcctcatgttggtgttggggaattctgtgaaactaag
aaggcatactattttgggtatattattcaccgcctactgatgtgcgctcttggtcgaaga
gctgaggatgaccgagatcattatggaaataaaagactagatcttgctggtccactgctt
ggagggctgtttagaatgcttttcaggaagttaacaagggatgtgagatcttatgtgcaa
aagtgtgtagataacggaaaggaagttaatttgcaatttgctatcaaagcaaaaactgtt
accagtggcttgaagtactctcttgctactggaaactggggacaggctaaccaagctgga
accagagcaggggtttctcaggtgcttaatcgcctgacctatgcttctacactttcacat
ctccggaggctgaactctcccattgggcgtgaaggaaaattggcaaaaccccgccagttg
cataattcacattggggaatgatgtgtcctgcggaaacaccagaaggacaagcttgtggc
ttggtgaaaaatcttgccttgatggtatatatcactgttggttctgctgcaaatccaatt
ttggaatttttggaggagtggggcacagaaaattttgaggagatatcaccagctgtcatt
ccacaagctgctaaaatttttgtcaatggttgttgggttggaattcataggaaccctgac
ctgttggttaagactcttaggcgtttaagaagacagattgatgtcaacactgaagttggc
gtggttcgtgatatccgtcttaaagaacttcgactctacacggattatggacgctgcagt
cgtccattgtttattgttgagggtcagaggctgctcatcaagaaggcgcatatccgagct
ttgcaacaaagggagactcctgatgaaggctggcatgaattggtctcaaaaggatttata
gaatacatagatactgaagaagaggagactaccatgatctccatgaccataagtgacctt
caaaacgcaagtcacaacccagaggatgcttactctggaacttacacacattgtgagatt
catccttcattgatacttggtgtttgtgcgtcgattattccttttcctgaccacaaccag
tcacctcgtaatacatatcagtctgctatgggaaagcaagccatgggaatttatgtcacc
aattaccagttaaggatggacacgttggcctatgttctatactacccacaaaagcctcta
gttactactcgtgctatggaacatttgcacttcagacagttaccagctggcattaatgca
attgttgctatcgcttgttattctggatataatcaagaagattcagttattatgaatcaa
tcttccatagatcgtgggttcttccgatcactatttttccgctcttacagagatgaggaa
aagaagatgggtacacttgtcaaagaggaatttggtcgtccaaatagggaaaatactatg
ggaatgcgtcatgggtcatatgataaactagatgatgatggccttgcaccacctggaaca
agggtctcgggggaagatgtcattattgggaagacatctcctattccacaggatgacgct
caagggcaagcttctagatactcgaagcgtgaccatagtacttctctgcgtcacagtgaa
agtggcatggtagatcaggttctgttaacaacaaatgcggatggtctaagatttgtcaag
gttaggatgcgatctgttcgcataccacaaattggagacaagtttagcagtaggcatggg
caaaaaggaactgttgggatgacttacactcaagaggatatgccatggacaatcgaaggc
atcacgcccgatattattgtgaatccacatgctattccatcccgtatgactattgggcag
ctgattgagtgtattatgggtaaagttgcggcccagatggggagggaaggcgatgccact
ccattcaccgatgtgactgtggataacatcagcaaagctcttcatacatgtaattatcaa
atgcgtggatttgagaccatgtacaatggtcacactggaagaaaactgactgcaatgatt
ttcctgggtcccacgtattaccaaagactcaagcacatggtggatgacaagatacattcg
agaggacgtggtcctgttcagatactcacccggcaaccagcagaggggcgatctcgtgat
ggtggtctccgctttggagaaatggaaagggactgtatgatcgcacatggagcagctttc
ttcctgaaggaaaggctgtttgaccagagtgacgcataccgagtccatgtatgcgagaaa
tgtggtctcatcgcaatagctaacctaaagaagaactcgttcgaatgtaggggctgcaag
aacaagactgacattgtccaagtacacataccctatgcttgtaagcttctgttccaggaa
cttatggcaatggctattgctccaagaatgcttacccatgatatgaagacagggaaggat
cagaaaaagcgctga
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