Miscanthus floridulus: 136538198
Help
Entry
136538198 CDS
T10264
Name
(RefSeq) transcription initiation factor IIF subunit alpha isoform X1
KO
K03138
transcription initiation factor TFIIF subunit alpha
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136538198
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136538198
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIF
136538198
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIF_alpha
zf-C3HC4_3
DZR_2
ELL
zf-RING_13
zf-RING_2
LIF-R_Ig-like
DUF1258
zf-P11
Motif
Other DBs
NCBI-GeneID:
136538198
NCBI-ProteinID:
XP_066386281
LinkDB
All DBs
Position
1:complement(103386668..103415446)
Genome browser
AA seq
529 aa
AA seq
DB search
MGSADLVLKLACEGCGNTSDLYGTGCKHTTLCSDCGKSMARSRARCLVCSAPITRLIREY
NVRANSVMDKTYSIGRFVTGLPPFSKKKNAENKWSLHKEGLQGRQITENMREKYSKKPWI
LEDETGQYQYQGQMEGSQSATATYYLLMRHGKEFNAYPAGSWYNFSKIAQYKQLTLEEAE
EKMNKRKTSATGYERWMMKAAANGPAAFGSDMKKLEATNGGEKESARPKKGKNNEEGNNS
DKGEEDEEEAARKNRLGLTKKGMDDDEEGGKDLDFDLDDEIEKGDDWEHEETFTDDDEAV
DIDPEERADLAPEIPAPPEIKQDDEENEEEGGLSKSGKELKKLLGRAAGLNESDADEDED
DDDQEDESSPVLAPKQDQVKDEPVDNSPAKPTPLGHARGTPPASKSKQKRKSGVDDAKTS
SGAASKKAKVELDTKASGLKEEASSSAKPASKISASSKSGTNISPVTEDEIRSVLLAVAP
VTTQDLVSRFKSRLRGSEDKNAFAEILKKISKIQKTNGHNYVVLRDDKK
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggggagcgcggacctggtgctcaagctggcgtgcgagggctgcggcaacacgtcggat
ctctacggcacggggtgcaagcacaccactctctgcagcgactgcgggaagtccatggca
cgctcccgtgcccgctgcctcgtctgctcggcgcccatcaccaggctcatccgggaatat
aatgtacgagctaattctgttatggataagacatactctattggaagatttgtcactggc
ttacctcctttctcgaagaagaagaatgctgagaataagtggtctcttcataaggagggt
ctacaaggacgtcagataactgagaatatgcgggaaaaatacagcaagaaaccatggatt
ttggaagatgaaacaggccaatatcagtatcaaggtcaaatggaaggatcacagtcggct
acagctacgtattatttgttaatgaggcacggcaaggaatttaatgcatatcctgctggt
tcttggtataatttcagtaaaattgcacagtacaaacaattgacactagaagaggctgaa
gaaaagatgaataagaggaagaccagcgcaactggttatgaacgttggatgatgaaagca
gcggcaaatggaccagctgcctttggttcagacatgaagaagcttgaggccacaaatggt
ggggaaaaagaaagtgctcggcctaagaaaggaaaaaataatgaagagggtaataattct
gataagggtgaggaggatgaagaggaagctgcacgcaagaataggcttggattaactaaa
aagggcatggatgatgatgaggaaggtggaaaagatctagactttgatttggatgatgaa
attgagaaaggtgatgactgggagcatgaagaaacattcactgacgatgatgaggccgta
gatattgatccagaggaacgggcagatttagctcctgaaattcctgctccacctgaaatc
aagcaggatgatgaagagaacgaggaagaaggtggcctgagcaagtctggcaaggaacta
aaaaagttgcttggacgtgctgctggactaaatgagtcagatgcggatgaggatgaagac
gacgatgatcaggaagatgagtcatctccagtgcttgctccaaaacaggaccaagttaaa
gatgaacctgtggataacagcccagctaaaccaacaccattaggacatgctcgtggcaca
cctcctgcatccaaatccaagcaaaagagaaaatcaggtgttgatgatgcaaaaacttct
agcggtgcagcttcaaagaaagcaaaggtggaattggatacgaaagcatcaggcctcaaa
gaggaggcatcatcttcggcaaaacctgcatcgaagatctctgcttcatcaaaaagtggg
acgaacatatcacctgtcacagaggatgaaatcaggagtgttcttcttgcagtggctcca
gtcaccacacaagatttggtatccagattcaagtctaggcttcgaggttcagaggacaag
aatgcatttgctgaaattctgaagaaaatttcaaagatacagaagacgaacggccacaac
tatgttgtcctcagagatgacaagaagtaa
DBGET
integrated database retrieval system
