Miscanthus floridulus: 136538745
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Entry
136538745 CDS
T10264
Name
(RefSeq) TATA-box-binding protein 1-like
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136538745
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136538745
03021 Transcription machinery [BR:
mflo03021
]
136538745
Transcription factors [BR:
mflo03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
136538745
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136538745
RNA polymerase III system
TFIIIB
136538745
RNA polymerase I system
SL1/TIF-1B
136538745
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TBP
DUF3378
Motif
Other DBs
NCBI-GeneID:
136538745
NCBI-ProteinID:
XP_066386803
LinkDB
All DBs
Position
2:complement(50005422..50008085)
Genome browser
AA seq
234 aa
AA seq
DB search
MASAAGADPTALELGQRSGSGAWGGGGGRAAAPAMNDAYEPGVDLAMHPSGFVPTLQNIV
STVNLDCQLDLQQIANSARNAEYNPKRVAAVIMRIRDPKTTALVFASGKMVCTGAKSEDH
SKLAARKFARIVQKLGFPARFKDFKIQNIVGSCDVKFPIRLEGLALASGTFANYEPEIFP
GLVYRMVEPKIVILVFVSGKIVLTGAKVREEIYTAFENIYPMLVQFRKRQQYYR
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgcggcgggcgcggatccgacagcgctggagctggggcagcgcagcgggagc
ggggcgtggggcggaggaggaggacgagccgcggcgccggcgatgaacgacgcgtatgag
cccggggtggacctcgccatgcacccgtccggcttcgtccccaccctccagaacatcgta
tcaacagtcaatttggactgccagttggatctgcaacaaatagccaacagtgctcgtaac
gcagagtacaacccaaagcgtgttgctgcggttatcatgaggataagggatccgaagaca
acagcattggtatttgcctcagggaagatggtttgcactggagcaaagagtgaagaccat
tcaaagcttgctgcgaggaagtttgcgcgcattgtccagaagctcggcttcccagctcgg
ttcaaggatttcaagatccagaatatagttgggtcatgtgacgtcaaatttcctattcgt
ctggagggcctcgctttggccagtggcacgtttgccaattatgagccagagatcttccct
ggactggtctaccgtatggtggagcccaagatcgtgatcctcgtcttcgtctctggaaag
atcgtcctcactggagccaaggtgcgggaagagatatacacggccttcgagaacatatac
ccgatgctcgtgcagttcaggaaacgtcagcagtactatagatag
DBGET
integrated database retrieval system