Miscanthus floridulus: 136539873
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Entry
136539873 CDS
T10264
Name
(RefSeq) serine/arginine-rich-splicing factor SR34-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136539873
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136539873
Spliceosome [BR:
mflo03041
]
Common components
Common spliceosomal components
SR proteins
136539873
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
RRM_3
Motif
Other DBs
NCBI-GeneID:
136539873
NCBI-ProteinID:
XP_066387962
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All DBs
Position
2:complement(140115028..140119783)
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AA seq
280 aa
AA seq
DB search
MSRRWSRTIYVGNLPGDIREREVEDLFYKYGRIVDIDLKVPPRPPGYAFVEFEDPRDAED
AIAGRDGYNFDGHRLRVEAAHGGRGNTSSNDRSSGFGGGGGARRGVSRHSEYRVLVTGLP
SSASWQDLKDHMRKAGDVCFSEVYREGSGTIGIVDYTNSDDMKYAIKKLDDTEFRNAFGR
AYIRVKEYDGKRDRSYSRSRSPSRSYSKSRSPSKSPRTRRSASRSRSRSVSSHSRSASKG
RSPSRSPARSKSPNASPANGEAASPKKQSPSRSPSGSRFS
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgagcaggcgctggagccgcacgatctacgtcgggaacctccccggcgacatccgggag
agggaggtggaggatctgttctacaagtatggtagaattgttgacatcgacctgaaggtc
cccccaaggccacctggttatgcttttgttgagtttgaagatcctcgtgatgctgaggat
gcaattgctgggcgggatggatacaactttgatggacaccgtctaagagtggaggctgct
catggtggtagaggtaatacttcctcgaatgaccgttcaagtggctttggtggtggtggt
ggagcacgtcgtggtgtgtcgagacactcagagtatcgtgttcttgtcactggactgcct
tcttctgcatcatggcaggatttaaaggatcatatgcggaaggctggtgatgtttgtttc
tctgaagtgtatcgcgaaggctcaggcaccataggaattgtggactacacaaattctgat
gatatgaaatatgctataaagaagctggatgatactgaattcaggaacgcctttgggcga
gcctatataagggtgaaggaatatgatggcaaacgtgatcgctcctactcacgtagccga
agcccaagtcgtagctacagcaaaagcaggagcccgagcaaatcacccaggactcgccgt
tcagcatctagatcccggtcgaggtctgtttcttcccattcaaggtctgcatcaaaagga
cgttctccgtctagatcaccagcaagatccaaatctcctaatgcttctcccgcaaatggt
gaagcagcaagccccaagaagcagagtccaagcaggagcccatctggctcacgcttctcc
tga
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