Miscanthus floridulus: 136540576
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Entry
136540576 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP96 isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136540576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136540576
03036 Chromosome and associated proteins [BR:
mflo03036
]
136540576
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136540576
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136540576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup96
Nucleoporin2
Motif
Other DBs
NCBI-GeneID:
136540576
NCBI-ProteinID:
XP_066388673
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All DBs
Position
2:complement(168459952..168465088)
Genome browser
AA seq
1006 aa
AA seq
DB search
MAASTVFPVLRSSEYFTRPSIDELFEREVADPGYCSRVPNFIIGRAGYGQVRFLGDTDVR
DIDLNEIVRFEKHNVVVYEDETCKPPVGHGLNKAAEVSLLLSLKDLPEPSILVEVLRCRA
RKQGSRFLSFNPVNGKWKFEVDHFSRFGLVDEEEEDAVMDDAAIRQPITEVRERDPPSNG
HEIELSHSLPAHLGLDPAKMQEMRMVMFSNVEEDEYMEDGLPSDERYGSRERMNVDSPTS
SGKGLRLRSLSPLHVSSQKAGRRSGMPVRKEPQALLDYSMNSSELGPSTQGILMSGQNRG
FPVSMTKVDGFKLPADQETPVAGNMYTNCVVDAALFMGRSFRVGWGPNGLLVHSGSLVNN
PGTGLSSVIHIEKVASDKAVRDDKNKIKDDLTELCFSDPMDLHKSLDHEFLETESDSFRL
KLQNVKANRLVLPDICRSYIDVIEKQLEVSDLSMSTRVLLMHQVTVWELIRVLFSERATG
NQLEPVADGDQEGMVLDKKEGYVDIDPEALPLFRRADFSNWLQDSVCHRVQGEVGSLNDA
RYLEHILLLLTGRQLDTATEIAVSRGDVRLAILLSQAGGSMSNRSDLAQTLDQWKMNGLD
FDYIEEDWLKVYRLLAGNVQAAFLDSPIDWKRYLGLIMWYQLSPEIPLDIIIHSYDQLLG
EGKVPYPVPVYIDEGPLDEAPQWSPGDHFDISFYLMLLHANQGEKFGLLKTMFSAFSSSF
DPLDYHMIWHQRSILEAIGAFSSNDLHLLDLSFVYQLLCLGKCHWAIYVILHMPYLDDAP
YIHEKLIREVLSQYCESWSRDDAQRQYIVELGIPEEWMHEALALYHEYYGDKQGALENFI
QCGNWKKAHTIFMTSVAHSMFLSSNHQEVWKITSALENHKSEIADWDLGAGIYIDFYILK
NSMQERNAMDDSDSLEEISESCRSFFGRLNDSLLVWGSKLPVESRACYSKMAEELCALLV
DTPSETLNLPMGCLQTMLNAPVPDEIRSSYLQDALSVFTEILCSDS
NT seq
3021 nt
NT seq
+upstream
nt +downstream
nt
atggcagctagcactgtgttccccgtgctgcgctcctccgaatacttcacaaggccgtca
attgatgagctttttgagagggaggtggctgatcctggctactgcagcagggttccaaac
ttcatcatagggagggctggatatgggcaggttagattcttgggcgacaccgatgtgagg
gacattgacctgaatgaaattgtcaggttcgaaaaacacaatgtggtggtttatgaagat
gagacttgtaagccacctgtagggcatggtcttaacaaagcagcagaagtgtccctgctg
ctgagtctgaaggatcttccagagcccagtatccttgttgaggtgctaaggtgtcgtgca
agaaagcaaggttctaggtttctttcattcaatccagtgaatggaaaatggaaatttgag
gttgatcattttagtagatttgggcttgtggatgaggaggaagaggatgctgtgatggac
gacgcagctattcggcagccaattactgaagtaagagaaagagacccaccttcaaatggt
catgaaattgagctttcccattcattgcctgctcatctcgggcttgaccctgcaaagatg
caagaaatgaggatggtgatgttttccaatgtggaagaagatgaatatatggaggatggg
ctcccttctgacgagaggtatggtagcagagaaaggatgaatgtggattcacctacctca
agcggtaaaggtttgaggttaaggtctctctctcccttgcacgtgtcttctcagaaggct
ggcaggagatctggtatgccggttcggaaagaacctcaggcacttttggactacagtatg
aattcttcagagcttggtccatcgactcagggtattcttatgtctgggcaaaacagagga
tttccagtgagtatgaccaaggtggatggttttaagctgccggctgaccaagaaactcct
gttgctggaaacatgtatactaattgtgtagtggatgctgctttattcatgggtagatca
tttcgtgttggttggggaccaaatggtttacttgtacattcaggtagtctggtcaataat
cctggaacgggcctatcttctgttattcatatagagaaagttgcaagtgacaaagctgtg
cgtgatgataagaacaagattaaggatgacctaacagaactatgtttttctgatccaatg
gacctccataagagtcttgatcatgagtttctggagactgagtctgactcgttcagatta
aaacttcagaatgtcaaggcaaatcgtttggttttgcctgacatctgcaggtcatatatt
gacgtaattgaaaagcagcttgaagtcagtgatttatctatgtctacgcgtgtgctgttg
atgcatcaagtaacagtgtgggagttaatcagggtcttgttctcagaaagagcaactggt
aaccagttggagcctgttgcagatggtgatcaggaaggcatggttttagacaaaaaagaa
ggctatgtcgacatagaccctgaagcacttcctttgtttaggagagcagactttagcaat
tggttacaggacagtgtttgccatcgggtgcaaggagaggtgggctccttaaatgatgcc
aggtacttggaacatatccttcttcttttgactggtcgacaattggacacggccacagaa
attgctgtctcaaggggtgatgttcggttggcaatcttgctaagtcaggcaggtgggtca
atgtcaaatcgatctgaccttgctcagacactggatcagtggaaaatgaatggtctagat
tttgattatattgaggaagactggttaaaggtatataggttgcttgctggtaacgtacag
gctgcttttctagattcaccaattgactggaaaaggtaccttggtttgattatgtggtat
caattatcacctgaaataccacttgatattatcattcattcttatgatcaactccttggt
gagggcaaagttccctatcctgttcctgtatatatagatgaaggacctcttgatgaagcg
cctcagtggtccccaggtgaccattttgatatctccttctacctaatgcttcttcatgcc
aatcaaggcgagaagtttgggctgctaaaaactatgttcagtgcattctcatcttcattc
gaccccttggattatcatatgatatggcatcagcgttcgattttggaagctattggtgct
ttcagttcaaatgatcttcacttgctagatttgagttttgtttatcaattactttgtctt
gggaagtgccattgggctatctatgtcattctacacatgccgtatcttgacgatgcccca
tacattcatgagaaattaatcagggaagttttatcacagtattgtgagtcatggagtaga
gatgatgctcaaaggcaatacattgtggaacttggtataccagaagaatggatgcatgaa
gctctggctctttatcatgaatactatggagataagcagggtgcactggagaattttatt
cagtgtggcaactggaagaaagctcatactattttcatgacttctgttgctcattctatg
tttctgtcatctaaccatcaggaggtctggaagatcacaagtgccttggagaaccataag
tctgaaattgctgactgggaccttggtgccggaatatacatagacttctacattctaaag
aactcaatgcaagaaagaaatgccatggatgattcggattcactcgaggagataagtgaa
tcatgcaggagtttctttggcagattaaatgattcattgttagtctggggaagcaaatta
cctgttgagtcaagagcatgctactcgaagatggcagaggagctatgcgcgcttctcgtg
gacaccccaagcgagacgctgaatctacccatgggatgtcttcagacgatgctcaacgct
ccagttccagatgaaatcaggtcgtcttacctgcaggatgcactcagcgtcttcaccgaa
attctttgcagcgattcatag
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