Miscanthus floridulus: 136540634
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Entry
136540634 CDS
T10264
Name
(RefSeq) protein RRP6-like 1
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
136540634
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136540634
NCBI-ProteinID:
XP_066388730
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Position
2:complement(170523569..170529317)
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AA seq
700 aa
AA seq
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MDEPEGVRGREDAAPGREAGDAGDGFQLVTHGKKKKKRAVSGQDGGSAGSGAVLGAGSVR
ALTKDKGAAPAPGAKAKVPFHDPSIPRPQDVYKIIVDNYNPFEHVWLERSQDGTRRVHPL
EKLPVEQFVDRNVPEREPVKPADLEDTQFTLVEDHKGLVELAKKLKGVTEFAVDLEHNQY
RSFQGFTCLMQISTRTEDFIVDTLKLRIYIGLYLQEPFKDPTKRKIMHGADRDIMWLQRD
FHIYVCNLFDTGQASRVLQMERNSLEYLLLHFCGMTAKKEYQNADWRSRPLPDEMIKYAR
EDTHYLLYIYDLMRQRLQRESTFENDLLLEVHKRSNEICLQFYEKELLTDTSYLHIYGLQ
EHELDAKQLAVVAALHEWRDRIARQEDESTGYILPNKALIEIAKQMPTDVGHLKRIVKSK
YPYVESNLELIAYTVWNALKYSYAFEGIAEQLKKERLEQLALKSGQASDEVTPLDADIDR
SNFDSSDQSANVSVASGSGAGFMSEAALICSIHLEDKTQTISSVKTSGTLSGLIRPVNKD
VLSNNIHQQASQDLRHTLGALKGNLASGGQSNEQAGSNVENFRSSVFPSQQLSGGVKPFY
PNAGMHIDNVWIQTTQMNETMQLGNTPYYTQLPGYSTEVVGSRYEPEGLQMSGYLSGFEP
GIESINQRSTVTGQPPGRHKEGNFQSSVRRQSFPPSSYKK
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atggacgagcccgagggcgtgagggggagggaggacgcggcgccgggccgcgaggccggc
gacgccggggacgggttccagctcgtgacgcatggcaagaagaagaagaagagggcggtc
agcggccaggacggcgggagtgctggctctggcgccgttctcggagccgggtcggtgcgg
gcgttgaccaaggacaagggagccgcgccggcgccgggggccaaggccaaggtgcccttc
cacgatccgagcatcccccggccgcaggacgtgtacaaaatcatagtggataactacaac
ccgttcgagcatgtctggctagagcgcagccaagacggcacccgacgtgttcacccgctg
gaaaaactgcctgttgaacagttcgttgacagaaatgttcctgagagagaaccagtgaag
ccagctgatttagaggatacacaatttacactggttgaagatcacaaaggcttagtggaa
ttagcgaaaaagctgaagggtgtcactgaatttgctgtagatttggagcataatcaatat
aggtcatttcagggcttcacctgcttgatgcagatttcaacaagaacagaagactttatt
gtggacactcttaagctacgcatatacattggtctctatttgcaagaacctttcaaagat
ccaacaaagagaaagataatgcatggtgcggatcgtgatataatgtggctccagcgggat
ttccacatctacgtgtgcaatctttttgacacaggacaggcttcaagggtcttacagatg
gagagaaacagccttgagtacctattgcttcacttttgtggaatgacagcaaagaaggaa
tatcaaaatgccgactggaggtcgaggccacttcctgatgaaatgatcaagtatgctaga
gaagatacacactatctgctgtacatatatgacttaatgagacagagactacagagggag
tcaacatttgaaaatgatcttcttctagaggtccataagcgcagtaatgaaatttgctta
cagttctatgagaaggagcttctgacagatacatcctatctccacatatacgggttgcag
gaacatgaactggatgcaaaacagctggctgttgttgctgctctacatgagtggagagat
cgtatagctcgtcaggaagatgaaagtactggttatatactgccaaataaggctttaatt
gagatagcaaagcagatgcctacagatgttggacatttgaaaagaattgtgaaatcaaaa
tatccatatgttgagagcaatcttgagctaattgcttacactgtctggaatgcacttaag
tattcttatgcgtttgaaggaatagctgagcaactaaaaaaggaacggctggaacagttg
gctttgaaaagtggtcaggccagtgatgaagtgactcctttggatgctgacattgatagg
agtaattttgattcatctgatcagtctgcaaatgtcagtgttgcttctggcagtggggct
ggttttatgagtgaagcagctttgatctgcagcatccacctagaggataaaactcaaacc
atatcctcagttaagacctctgggaccttgtcaggcctgatcagaccagtgaataaggat
gtcctgagcaataatatacatcagcaggctagtcaggacctgagacacactttaggagct
ctaaaaggaaacttggcatctggaggacagtcaaatgagcaggctgggagcaatgtggag
aattttagatcttctgtatttccttcccagcagttgtctggtggggtaaaaccattttat
ccaaatgctggaatgcacattgacaatgtttggattcaaacaactcagatgaatgagaca
atgcagctgggcaacacaccttactacacacagcttccaggatatagcactgaagttgta
gggagccgttatgaacctgaaggcttgcagatgtccgggtacctgtctggttttgagcct
ggcattgagtcaataaaccaaagaagtacagtaacaggacagcctcctggtagacacaag
gaaggaaatttccagagttcggtgagacgacaatctttcccaccttcaagttacaagaaa
tga
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