Miscanthus floridulus: 136540675
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Entry
136540675 CDS
T10264
Name
(RefSeq) chaperonin CPN60-1, mitochondrial-like
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
136540675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136540675
03110 Chaperones and folding catalysts [BR:
mflo03110
]
136540675
03029 Mitochondrial biogenesis [BR:
mflo03029
]
136540675
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mflo04147
]
136540675
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
136540675
Messenger RNA biogenesis [BR:
mflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
136540675
Chaperones and folding catalysts [BR:
mflo03110
]
Heat shock proteins
HSP60 / Chaperonin
136540675
Mitochondrial biogenesis [BR:
mflo03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
136540675
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
136540675
Exosomal proteins of other body fluids (saliva and urine)
136540675
Exosomal proteins of breast cancer cells
136540675
Exosomal proteins of colorectal cancer cells
136540675
Exosomal proteins of bladder cancer cells
136540675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
PTS-HPr
Motif
Other DBs
NCBI-GeneID:
136540675
NCBI-ProteinID:
XP_066388779
LinkDB
All DBs
Position
2:171718066..171723486
Genome browser
AA seq
574 aa
AA seq
DB search
MYRAAASLASKARHAGSSARQVASSLAWSRNYAAKDIKFGVQARALMLRGVEELADAVKV
TMGPKGRTVIIEQSFGVPKVTKDGVTVAKSIEFSDRVKNVGASLVKQVANATNDTAGDGT
TCATVLTKAIFTEGCKSVAAGMNAMDLRRGISMAVDSVVTNLKNMAKMISTSEEIAQVGT
ISANGEREIGELIAKAMEKVGKEGVITIADGNTLYNELEVVEGMKLDKGYISPYFITDQK
NQKCELNDPLILIHDKRVSNAHSVAKVMELAMKKQKPLLIVAEDVEGEALGTLILNKLRG
GVKVCAVKAPGFGGSRKTNLQDLAILTGGEVITEELGMNLENFEPQMFGTCKKVTISKDD
TVVLDGAGDKKAIEERAEHLRSAIEQSTSDYDKEKLQERLAKLSGGVAVLKIGGASEVEV
SEKKDRVTDALNATKAAVEEGIVPGGGVALLYASKDLDTLETANFDQKIGVQIIQNALKT
PVHTIASNAGVEGAVIVGKLLEQENTDLGYDAAKGEYVDMVKAGIIDPLKVIRTALLDAA
SVSSLLTTTESVIVEIPKGESSASAMGSMDGMEY
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atgtaccgcgcggccgccagccttgcctccaaggccaggcatgccgggagcagcgctcgc
caggtggcgagcagcttggcctggagcaggaactatgctgctaaggacatcaagtttggt
gtccaagcccgggccttgatgctgaggggtgttgaagaattggccgacgctgtcaaagtg
acaatgggccctaagggaagaactgttattattgagcaaagctttggtgtacctaaagtt
acaaaggatggagtgaccgttgccaagagcattgaattcagtgacagagtaaagaacgtt
ggtgcaagccttgtgaagcaggtcgctaatgctaccaatgatacagctggggatggtact
acatgtgccactgttctgacaaaggctatattcactgagggttgcaagtctgtagccgct
ggaatgaatgccatggatctgagacgtggtatctcaatggctgttgattctgttgtcacg
aacctaaaaaacatggcaaaaatgattagtacatcagaggaaatagcacaggtgggtact
atatcggctaatggggaaagggaaattggtgagctaattgcaaaggctatggagaaggtt
ggtaaagagggagtcatcactattgcggatggcaacactctctacaacgagcttgaagtt
gtggaaggcatgaagttagacaaaggttacatctctccgtactttattaccgaccagaag
aaccagaaatgtgaactaaatgatcccttgatattgatacacgacaaaagagtatcaaat
gcgcactccgtggccaaagtgatggagttagctatgaagaagcaaaaacctctgcttatt
gtcgcagaagatgtagaaggtgaagcgttgggtaccctgattcttaacaagcttcgtgga
ggtgttaaggtctgtgcggtcaaagctcctggttttggggggagcaggaaaaccaactta
caggaccttgctatccttactgggggggaagttataactgaagaacttgggatgaacctt
gagaactttgagcctcagatgtttggcacttgcaagaaggttacaatttctaaggatgac
actgtcgtccttgatggagctggggataagaaggcaattgaagagagagctgagcatctg
agatctgcgattgagcaaagcacttctgactatgacaaggaaaagcttcaagagcgattg
gcaaagctttctggtggtgttgctgttctaaagattggtggagcaagtgaagtggaagtc
agtgagaagaaggatagagtgacggatgcactaaatgcaaccaaagctgcagtggaagag
ggtattgtgccaggtgggggtgttgctcttctctatgcttcaaaagacctggatacattg
gagactgcaaactttgaccaaaagattggtgtccaaatcattcaaaatgctttgaagacc
ccggtgcatactattgcttcaaatgctggggtagaaggggctgttattgttggcaagctt
ttggaacaggagaacactgatctaggctatgatgcagctaaaggtgaatatgtggatatg
gtgaaggctggtatcatcgacccgcttaaagtgattagaacagccctactggatgctgca
agtgtatcatctcttttgactaccacagaatctgtcattgttgagatccccaagggagag
agcagtgcatcagcaatgggcagcatggatgggatggaatactga
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