Miscanthus floridulus: 136540702
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Entry
136540702 CDS
T10264
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
mflo Miscanthus floridulus
Pathway
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136540702
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136540702
03051 Proteasome [BR:
mflo03051
]
136540702
Membrane trafficking [BR:
mflo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
136540702
Proteasome [BR:
mflo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
136540702
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Dsc3_N
Rad60-SLD_2
TSC22
Ubiquitin_2
HEAT_HEATR1
GerD
Motif
Other DBs
NCBI-GeneID:
136540702
NCBI-ProteinID:
XP_066388815
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Position
2:172911732..172916469
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AA seq
536 aa
AA seq
DB search
MGGGDADAGGEPAASQATLHIRCTNGSKFAVRADLGTTVGAFKAIVAESCDVPAPQQRLI
YKGRILKDDQTLASYGVETDHTIHMVRGAAPPPASTAPAANQEPTTAAPASSPAAGLGGL
LQSLGATGAAANSGGSGLFGSGLPELDQMQQQLAENPNLTREIMNMPLMQNLMNSPELIR
SIIMNNPQMRELIDRNPDLAHVLNDPSIMRQTFEAVRNPELMREIMRNTDRAMSNIESSP
EGFNMLRRMYETVQEPFLNATTMGSEGDRNSNPFAALLGNQGSNQARDSAANGTTTASDT
TSGSLAPNTNPLPNPWGPNAGSDQGAARSPPASNTRSTTAGGLGGLGSADLGSMLGASGG
GSDATFLTQVLQNPTMMQMMQNIMSNPQSMNQLLNMNPNVRNMMESNTQMREMIQNPEFL
RQLTSPETLQQLISFQQSLMSQLGQQQAGQVRTQSGSGAGNVNLNTLMNMFSGLGAGGGL
GVPNAPNVPPEELYAAQLAQLQEMGFFDTQENIRALAATAGNVHAAVERLLGNMGQ
NT seq
1611 nt
NT seq
+upstream
nt +downstream
nt
atgggcggaggggacgccgacgccggcggcgagcccgcggcctcgcaggccacgctgcac
atccggtgcaccaacggctccaagttcgccgtgcgggccgacctgggcaccaccgtcggg
gcgttcaaggcgatcgtcgccgagagctgcgacgtgccggcgccgcagcagcggctgatc
tacaagggccggatcttgaaggacgaccaaaccctagccagctacggtgtggagacagac
catacaatccacatggtacgtggtgctgcgccaccaccagcatctactgcacctgcagcc
aaccaagaacctaccactgctgctcctgccagttccccagcagcaggattgggtggcttg
ttgcaaagtctgggtgctacaggggctgctgctaacagtggggggtcgggtttgtttgga
tctggcctccctgagttagaccagatgcaacaacagctagctgaaaatccgaacttgacg
agggaaataatgaatatgccactcatgcagaatttgatgaacagtcctgaactcatacgc
agtataataatgaacaatcctcaaatgcgtgagctcattgatcgcaatccagatcttgct
catgtcctcaatgatccaagcatcatgcgtcagacttttgaagcagttcggaatcctgaa
ctcatgagggagatcatgcggaacacagacagagccatgagcaacattgaatcttctcca
gaaggattcaacatgctccgtcgcatgtatgaaactgtccaagagccttttctgaatgca
acaacaatgggtagcgagggtgatcgaaactcgaatccatttgctgctcttctaggaaat
caggggtctaaccaagcaagagactcagctgcaaatggaacaactacagcttcagacacc
acatcagggtctctagctccaaatactaatccacttccgaatccttggggcccaaatgct
ggctctgaccaaggagcagcaaggtcccctcctgctagcaacactaggagtactacagca
ggtggcctaggagggttgggttcagcagatttgggaagtatgcttggtgccagtggtggt
ggctctgatgctaccttcttgactcaggttttgcaaaacccaactatgatgcagatgatg
cagaacattatgtctaatcctcagtccatgaatcagctgcttaatatgaatccaaatgta
cgtaacatgatggaatccaatactcaaatgagagaaatgattcagaatccagaatttctt
cgccagttgacgtctcctgaaacattgcagcaattgatttcattccagcagtctttgatg
tcacaacttggccaacaacaagctggacaggtgcggacacaatcaggctctggtgcaggc
aatgtcaacctcaacaccttgatgaacatgttcagcgggcttggtgctggtggtggccta
ggtgttccaaatgctcctaatgtgccaccagaagaactgtatgcagcacaattagctcag
ctccaagaaatgggtttctttgacacacaggagaacatccgagccttggccgctaccgct
ggaaatgttcatgctgcagtggagcgacttcttggaaatatgggccaatag
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