Miscanthus floridulus: 136541127
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Entry
136541127 CDS
T10264
Name
(RefSeq) ubiquitin domain-containing protein DSK2a-like
KO
K04523
ubiquilin
Organism
mflo Miscanthus floridulus
Pathway
mflo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
136541127
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mflo04131
]
136541127
03051 Proteasome [BR:
mflo03051
]
136541127
Membrane trafficking [BR:
mflo04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Selective cargos
136541127
Proteasome [BR:
mflo03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
136541127
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBQLN1
ubiquitin
UBA
Rad60-SLD
STI1-HOP_DP
UBA_7
Thr_synth_N
Rad60-SLD_2
Ubiquitin_5
UBA_HOIP
TSC22
HEAT_HEATR1
TSP9
Motif
Other DBs
NCBI-GeneID:
136541127
NCBI-ProteinID:
XP_066389088
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Position
1:complement(128984678..128989759)
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AA seq
579 aa
AA seq
DB search
MASGGEGAGSGESPPAASVEAAAGEATLHIRCANGSKFTVQTDLGATVGAFKEVVAGSCD
VPVPQQRLIYKGRILKDEQTLESYGIETDHTIHLVRGVAPPAASSAPAAASPLASSTPSS
GPAGGLGGLFPGLGAPGSGRPSGIFGSGFPELEQVEQHLSQNPNLMREIMNMPAMQNLMN
NPDLIRNMIMSNPQMREIMDRNPDLAHVLNDPSVLRQTLEAARNPEIMREMMRNTDRAMS
NIESSPEGFNMLRRMYETVQEPLLNATTMGEGNTASNPFSALLGNQGSNQPGQGQPATNA
PTTGSESTTGTPAPNTNPLPNPWSTNAGSAQGATRSSASGNARTGASGGVGGTGATGGLG
GLGSPDLSSLLGGLAGNPRTGAAGSLGGLGSPDLGSMLGGSPDVSLFNQMLQNPAMMQMM
QSIMSDPQTMNQLLNFNPNTRNLMESNTQMREMLQNPEFLRQLTSPETLQQLLSFQQSLL
GQFGQLQPSQGGNNAGSATGTRGNPSLDTLMSMLSGLGSGGGLGVPNTSNVPPEELYATQ
LTQLQEMGFIDTAENIQALVATAGNVHAAVERLLGNLGQ
NT seq
1740 nt
NT seq
+upstream
nt +downstream
nt
atggcaagcggaggcgagggcgcagggagcggtgagtctcctcccgctgcctcagtggag
gcggcagcgggggaggcgacgctgcacatccggtgcgcgaacggctccaagttcacggtg
cagacggacctgggcgccacggtgggcgcgttcaaggaggtcgtagcagggagctgcgac
gtgccggtgccgcagcagcgcctgatctacaagggccgcatcctcaaggacgagcaaacc
ctagaaagctacggcattgagacagatcacacaattcacttggtgcgtggtgtcgcccca
ccagctgcatccagtgcacctgctgctgccagcccccttgcttcatctactcctagtagt
ggtcctgcaggtggcctgggaggcctatttccaggtcttggtgctccaggaagtggtagg
ccatcaggaatatttgggtcaggatttccagaattagagcaagttgagcagcatttaagc
cagaatcccaacttgatgagggagataatgaatatgccagcaatgcaaaatctcatgaat
aaccctgatttaatacgcaatatgatcatgagcaacccacaaatgcgcgagatcatggat
cgaaatcctgatcttgcccatgtgctcaatgacccaagtgtcctccgtcaaaccctcgaa
gctgctaggaaccctgaaatcatgagagagatgatgcggaacacagacagagctatgagc
aacattgagtcttctcctgaaggttttaatatgctccggcgcatgtatgaaactgtccag
gagccacttctaaatgcaacaacaatgggggaaggaaacacagcctcaaacccattttca
gctcttctcggcaatcaggggtctaaccaacctggtcaaggtcaacctgcaacaaatgct
cccactactggttcagagtcgacaactggaaccccagctccaaatactaatccactacca
aatccctggagcaccaatgctgggagtgcacaaggagcaacacggtccagtgctagtggc
aacgcaagaactggtgcttctggtggcgttggaggcactggtgccactggtggactggga
gggttgggttcaccagatttgagtagtttgcttggtggtcttgctggcaatccaagaact
ggtgctgctggcagtttaggaggtttgggttcaccagatttggggagtatgcttggtggt
tcacctgatgtttctcttttcaatcagatgttgcaaaaccctgcaatgatgcagatgatg
caaagcattatgtctgacccacagaccatgaaccagttgcttaacttcaacccaaataca
cgcaacctgatggaatcaaacactcagatgagggaaatgcttcaaaatccagaatttctt
cgccagctgacatcgcctgagactttgcagcaattactctcatttcagcagtctttatta
ggacagtttggtcaacttcaacctagccagggtggaaacaatgcaggcagtgccacaggt
acgcggggaaaccctagccttgacaccttgatgagcatgctcagcgggcttggttcggga
ggtggcctaggtgttccaaatacttccaatgtgccaccggaggagctctatgccacacag
cttactcagctccaagaaatgggtttcattgacaccgcggagaacattcaagcactggtc
gctaccgctgggaatgtacatgctgcggtggagcgtcttctcgggaaccttggccagtag
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