Miscanthus floridulus: 136541584
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Entry
136541584 CDS
T10264
Name
(RefSeq) rRNA biogenesis protein RRP5-like
KO
K14792
rRNA biogenesis protein RRP5
Organism
mflo Miscanthus floridulus
Brite
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
Other 90S particles
136541584
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GFIT
Other DBs
NCBI-GeneID:
136541584
NCBI-ProteinID:
XP_066389622
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Position
3:complement(38807439..38827196)
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AA seq
1911 aa
AA seq
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MAPPRNDRKKGKGAGSKTDLRPDRKQFKRHRKEDAAGEQGDGDGERQQSAAPGSAALLAA
ASDEADFPRGGRSLLSKDEMAEARAEAEQDFEREGKKGKGKRKRRGGESSGFGEDDDLGT
LFGGATTGKLPRFANRITVKNISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDI
ALQENRKDSENSLCAEVVHVGQLVPCIVLRVDDDKKEGKVNRRVWLSLRLSLLYRGFSLD
GLQEGMVLTAQVKSIEDHGYILHFGVSSFSGFMQKDDKENVKIERRQLMQCVVKAIDKTR
AIVHLSFDKDFLSKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDI
FNLLNSFPSGNWKDDYSKNKKVNARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIY
DKSKVLRVDKKAGLFLEIPSPTPSPGFISIHDVSDKDAKNLDKFKEGSSLRVRILGVRNL
EGVAIGTVKDSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSE
LEHVVKPPKKFKVGAELLFRVLGCKSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGW
ITKIEKHGCFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNV
SFVISHNRVIPIDTPKLGSIVSGVVERLTPAAVVVSVNGFSKGTILNEHLADHHGQAAKV
KNLLKPGHEFNQLLVLDIEGQNLVLSAKHSLINCANEIPSEISQMHPGVVVHGYICNIIE
AGCFVRFLGHLTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSVNAETARVKLALQQSM
CSSTDSSFIQGYFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEEYGIILNFKDHPD
VVGLIEHHQLGGSSVEVGSSVKGLVLDLSDGVVNLSLKPELIGSVRNVGKKKKRQRAAVA
ELELHEEVNAVVEIIKESYVVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVG
NIPSSDSSGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEAEIIDIKPLELLLQFGG
NLHGRIHITEVLEEDSDEHPFSKLRIGQKLTARIVAEAEPSGKSGKNFKWELSIRPCIVK
GEFEELTAQKEQKHTTNEIVRAYVVKVDKEWVWLTVSRNVMAHLFVLDSSSEPSELKEFQ
QRFSVGQAVKGRVINVNREKRLLRLKALDNECTQPNIDEIQQSKSSVFEQTKQGDIIGGR
VQKILPGVGGLVIQIGAHLHGRVHYTEIVDSWVAEPLSGFHEGQFVKCKVLSVSRSSEGS
LRVDLSLRSSNLIRDSNNSGLVDDLAICTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIML
SRMVEARITLSNLSDEYVENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKL
DDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGD
MVKAKILKIDEKRHRVSLGMKKSYFDSDLTADTNDDEDDESALMDISVAPQMVESHNRNL
VHRKAKPMASVPPLQVSLDESEGSDLEEDNNNKGLEIANGTEANAKKNDKQLKKQARKQR
ELEISAMEERALQGDVPQTPDDFEKLVRSSPNSSFVWIKYMATLLDLADVEKARAVAERA
LKTIIPREEEEKLNVWVAYFNLENEYGGPREDAVKKVFQRALQYCDPKKLHLALLAMYER
TEQYELADELLDRMTKRFKTSCKIWLCRIQFALKQGKDVEYIKAIVNRALLSLPHRKRIK
FLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDIEVIRALFERVT
CLTLPPKKMQFLFKKYLNFEKSLGQDNERIQLVQQKAIEYVQSSLPSQDNP
NT seq
5736 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcgcaacgacaggaagaaggggaagggcgccggcagcaagaccgacctg
cgccccgaccggaagcagtttaaaaggcaccgcaaggaggatgcggccggtgagcagggg
gatggcgacggagagcggcagcagtcggcagcgccgggttccgctgcgctcctcgccgca
gcttctgacgaagctgatttcccgagaggtggacgcagcctcctgagcaaggatgagatg
gcggaggctcgcgcggaggcggagcaggatttcgagagggaggggaagaaggggaagggg
aaaaggaagaggaggggcggcgagtcgtctggttttggcgaggatgacgacttggggaca
ctcttcggcggggccaccactgggaagctcccacgctttgctaatcgcatcacagtaaag
aatatttcaccaaatatgaagctctggggtgttgtaattgaggttaaccagaaagatatt
gtgttaagtctacctggtggaattagagggtttgttcgctcagaggatgtgtgcgacatt
gctttgcaggaaaatcgtaaggatagtgagaacagtttatgcgcagaagttgttcatgtt
ggtcagcttgttccttgtatagtcctacgagttgacgatgataagaaagaaggaaaagta
aacagacgggtttggctatcattgcgattaagcctactgtacaggggattttccctggat
ggcttgcaggaaggaatggtacttactgcccaagtcaaaagcattgaggaccatggttac
attcttcattttggagtatcctcctttagcggatttatgcaaaaggatgacaaagaaaat
gtgaagattgagcgccgacaactgatgcaatgtgttgtgaaggcgattgacaaaactcgg
gctattgttcacttgagttttgataaagacttcctttctaaatctattattaaggatctg
aaaggcctttctattgatcatttgatccctgggatgatggttaatgcacgcgtccattca
gttcttgaaaatggagtcatgttatcatttcttacttatttcagtggaacagttgatatt
tttaatttgttgaattcctttccctctggtaattggaaagatgattacagtaagaataag
aaggtaaatgctcgcatcctgttcgttgatccatcaacaagagcagttgggcttacattg
aacaaacatttacttcatcttgaagtaccccctattaatctaaaagctggagatatctac
gataaatcaaaggtgctgagggtagataaaaaggctggtctttttcttgaaataccttct
ccaactccatcacctggatttattagtatacatgatgtgtcagacaaggatgcaaaaaac
ttggacaagtttaaggaaggcagtagcttacgtgtccgtatacttggagtgcggaatctt
gaaggagttgcaataggcaccgtaaaagacagtgcttttgaagggtctgttttcactcat
gatgatgttaaacctggaatgttagtgagagctaaggttgctactgttgagccattcggt
gctattgtacagttttcaagtggtgtgaaagcactttgcccgcttcctcacatgtcagag
ttggaacatgttgtgaaaccaccaaagaaatttaaggttggagctgagcttcttttccgt
gtattgggctgcaaatccaagagagttacagtgacatacaagaagtctctggtgaaatca
aaacttgatgtgctagcatcatatgctgatgcaaaaattggtttagtgactcatggatgg
attactaaaattgaaaagcacggttgctttgtaaaattctacaatggagttcagggtttt
gttagcagatctgaccttggattagaggctggaactgaagcagaaaatgtttatcatgtt
ggtcaagtggtcaaatgtagaattatcaatgtgatccctgcttcaaggaaactaaatgtt
agttttgtcatatcccataatagggttattccaatagacactccaaagttgggtagtatt
gtctctggtgttgtggaacggcttactcctgcagctgttgttgtcagtgtaaatggcttc
tccaaggggacaatactaaatgaacatttggcagaccatcatggtcaagctgctaaggtg
aagaatttgctgaaacctgggcacgagttcaaccaacttctagttctcgatattgaaggt
caaaatttagttctttcggcaaagcactcacttatcaattgcgcaaatgaaattccttca
gagatatcgcagatgcatcctggagttgtagttcatggttacatctgcaacattatcgaa
gctggttgtttcgtccgctttctcggacatttgactggtttctctcccaaggacaaagca
gttgataggcggatagaaaggctttctgatgcgttctatgttggccagtcagttcggagt
catatactcagcgtaaatgctgaaactgctagagtaaaactcgcacttcaacagtcaatg
tgctcctcaacggattcttcatttattcaaggatactttcttctggatcagaagattgca
gcattgaagtactcaagcaatgattgggctcacacttttggcattggtagcttagttgag
ggggaggtgggagcaatagaagaatatggtattatccttaacttcaaagaccatccggat
gttgttggcttaatcgagcaccatcaacttggtggcagtagtgtggaagtgggatcttct
gttaagggccttgttttggatttatctgatggagttgttaacttgtcccttaaaccagag
ctaattggcagtgttagaaatgttggaaaaaagaagaaacgccaaagggctgcagttgca
gagttggagcttcatgaggaagtgaatgcagttgtggaaataatcaaagagagctatgtg
gtcctttccatccctgagtacaattacgcaattggttttgcaccactgatggattacaac
tcacaactgcttccccaccaccactatgataatggacaacgcattactgtggttgttgga
aatatcccaagttctgactcttctggaagacttatcctactaccaaaagcttcagctcag
tattctgccctctctgaatctaaaagggctaagaagaaatcaggctacaaaattgggtca
cttgttgaagcagagattattgatatcaagccgcttgaacttctactgcaatttggtggc
aatcttcatggaagaatccatattactgaggttcttgaagaggattctgatgagcatccc
tttagtaaactcagaatagggcaaaagcttactgccagaattgttgcagaggctgaacct
tctggaaagagtggcaaaaacttcaaatgggaattgtctattaggccatgtatagtcaag
ggagagtttgaagaattaactgctcaaaaagaacaaaagcacaccacaaatgagattgta
cgtgcttatgttgtcaaggtggataaggaatgggtctggttaactgtatcaagaaatgtt
atggctcatttatttgtacttgatagttcttccgagcccagcgaactgaaagaattccag
cagcgctttagtgtaggccaagcagtgaaaggccgtgttatcaatgtgaaccgggagaaa
aggttacttcggttgaaggcacttgataacgaatgcacacaaccgaatatagatgaaata
caacaatcaaagtcctctgtgtttgaacaaacaaaacaaggagatatcatcggtggacgt
gttcaaaaaattctacctggtgttggtgggcttgtcattcagattggagctcatctccat
gggagggttcattatactgaaattgttgactcatgggtggccgaaccattgtctggattc
catgagggccagtttgtgaagtgcaaggtcctgtctgtgagccgctcatcagaaggatca
cttcgagttgatttatcactccgttcatcaaacctgatcagagactctaacaactcagga
ctagttgatgatctggcaatctgtacctcccggatagagaagatcaaagatctgcttccc
ggaactgagattaagggctatgtgaagaatgttaattctaaaggatgttttattatgctt
tctcgaatggttgaggctaggattactctatcaaatttgtcagatgagtatgttgaaaat
ccgcagaaggatttccctgttggaatgcttgtacatggaagggtcctgtctacggaccca
tcttcagggagagttgaggcatcacttaggaagaccactggttccaaattggaaaagctg
gatgatattagttatagtgatttgcatgttggggatatcattgatggccaagttaagcgg
gttgaatcctttggattattcgttacaattcggagaagtgaactggttggtttgtgccat
gtatcagaactttctgatgaacctgttgttgatattaactcttgctataaagctggtgat
atggttaaagccaaaattctgaagattgatgagaagcggcatcgagtatcacttggaatg
aagaagtcgtactttgattctgatctgactgctgacacaaatgatgatgaagatgatgaa
agtgctcttatggacatcagtgttgcccctcagatggttgaatctcataacagaaattta
gttcatcgcaaagcaaaaccaatggcttctgtgccgcctcttcaggtttccttggatgaa
tctgaaggttctgacctagaggaggataataataataaaggtcttgaaattgcaaatgga
actgaagcaaatgctaaaaagaatgataaacaattaaagaagcaagcaagaaaacaaagg
gaactagaaatcagtgctatggaggaaagggctttgcagggagatgtaccacaaactcca
gatgattttgagaagttggtcaggagctccccaaatagtagttttgtctggataaaatat
atggccactttgttagatcttgcagatgttgagaaagcacgtgcagtagctgagagggct
ttaaaaacaataatccccagagaagaagaggagaaacttaatgtttgggtagcatatttc
aatctggaaaacgaatacggtggtccacgggaggatgctgtgaaaaaggtatttcaaaga
gccttgcaatattgtgatcccaaaaagttgcacttggctcttcttgcgatgtacgagagg
actgaacagtacgaacttgcagatgaacttctagacagaatgaccaaaaggttcaaaact
tcctgcaagatatggttatgccgcattcagttcgccctcaagcaaggcaaggatgttgag
tacatcaaagccattgtaaaccgtgcgcttctaagtttgccacatagaaagcgcataaag
ttcctctcacagacagctattctagaattcaaatgtggggtgcctgaagaaggaagatcc
agatttgaactaatattgcgggagtacccaaaaagaacagacctttggagtgtttatcta
gaccaagaaatccgccttggtgacatagaagttatacgggcattgtttgagagggtgact
tgtcttaccctacctccaaaaaagatgcagttcttgttcaagaagtaccttaatttcgag
aagtcactgggtcaagacaacgaaagaattcagcttgtgcagcagaaggcaattgaatat
gttcagagttcacttccgtcacaagacaacccttga
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