Miscanthus floridulus: 136541590
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Entry
136541590 CDS
T10264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like
KO
K14411
RNA-binding protein Musashi
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136541590
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136541590
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136541590
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136541590
NCBI-ProteinID:
XP_066389631
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Position
3:39721362..39729954
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AA seq
446 aa
AA seq
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MEAAAADYGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADA
AVAERVTMDKHMIDGRMVEAKKAVPRDDHSIVSKSNASSIGSPGPGRTRKIFVGGLPSNV
TEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVE
VKRAVPKEQSPGPVVRSPVGVGNRVHSFLNGFNQGYNPNPIGGYGMRVDGRYGLLSGARN
GFSSFGPGYGMGMNVEGGMSGTFGASSGFISNSNGRQMGSYFNASSNRLGSPMGYLGLND
VPGSMLSSMSRNVWGNGSLNYPSNPTNMSAFASPGNGGQVGITGDSWGGLPSAHGMGSIS
SLGSGNLGRGAGDNSFGLPSGSYGRSNSTGTIGEPFSASGNTYEVNNPDTYGSSSIYGGT
AWRFASSEVDMPSFGHDIGNVDPTIK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgccgccgactacgggaagctcttcgtcggcggcatctcgtgggagacg
agcgaggaccgcctccgcgagtacttcggccgcttcggcgaggtcaccgaggccgtcatc
atgcgggatcgcagcacgggccgcgcccgcggcttcggcttcgtcgtgttcgccgacgcc
gccgtcgccgagcgcgtcaccatggacaagcacatgatcgacggacgaatggtggaagcg
aagaaggctgttcccagggacgaccacagtatcgtgagcaagagcaacgccagcagcata
gggtcgcctggaccgggacgcaccaggaagatctttgtcggaggcctgccctcgaacgtc
acggaggccgacttcagaaggtactttgagcagtttggcgtcatcaccgatgtggttgtg
atgtacgaccacaacacgcagaggccgaggggatttggattcatcacctacgattcggaa
gacgccgtggacaaagccctgcacaagagcttccatgagctcaatggtaagatggtcgag
gtcaagagggctgttccaaaggagcagtcccctggacctgtcgtgcgctcgcctgtggga
gtggggaacagggttcatagcttcctcaacggcttcaaccagggttacaaccccaacccc
ataggaggttatggtatgagggtggatggaaggtatggcttgctttcaggtgcacggaat
gggttctcttcctttggcccaggttatgggatgggcatgaatgttgaaggcgggatgagt
ggaacattcggtgcaagctctggtttcatcagcaactccaacgggaggcaaatgggttcg
tacttcaatgcaagttcgaacaggttgggtagccctatggggtaccttggtcttaacgat
gttccaggatcaatgttgagttccatgtctaggaatgtttggggtaatgggagtctaaac
tacccgagcaatcctacaaacatgagtgcttttgcttcacctggaaatgggggccaagtc
ggtattaccggtgacagttggggaggtctcccttctgctcatgggatgggcagcatttca
agtcttggatcagggaaccttggtcgtggagctggagataatagctttggtttgccttct
ggcagctatgggaggagcaactcaactggtacaatcggtgagcctttttctgcatcaggc
aatacatatgaagtaaacaacccagatacatatgggagcagctctatttatggtggcaca
gcctggaggttcgcatcatctgaggttgacatgccttcttttggtcatgatattggaaat
gttgatccaactatcaaatga
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