Miscanthus floridulus: 136541662
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Entry
136541662 CDS
T10264
Name
(RefSeq) ABC transporter B family member 28-like
KO
K05657
ATP-binding cassette, subfamily B (MDR/TAP), member 10
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136541662
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136541662
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB2, 3, 8, 9, 10 subgroups
136541662
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
ABC_ATPase
AAA_16
AAA_21
AAA_30
Zeta_toxin
AAA_29
AAA_5
RsgA_GTPase
AAA_25
AAA_14
SRP54
AAA_33
AAA_28
Rad17
nSTAND3
AAA_23
Motif
Other DBs
NCBI-GeneID:
136541662
NCBI-ProteinID:
XP_066389760
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All DBs
Position
3:complement(53388065..53404312)
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AA seq
703 aa
AA seq
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MAISTWSARLLLTPASSRATLWPWPPRPPAANPLSSSFPRNRLHFARPRPPRAYISAPAP
GPEAAYAPPSLDAAAAAADVAAAISSSDAVTWAGVWALLSRHRARIAVCLAALVACTACT
LSMPLFSGRFFETLIGRGNEPLWRLLSKIAVLYTLEPVFTIIFVINMTIIWEQIMARLRS
QIFRRILIQKMLFFDRHKVGELTGLLTSDLGSLKSIVSDNISRDRGLRALSEIIGTLCIL
FTLSTELAPVLGLLMVSISVLVAIFKSSTVPTFKSYGILQARISDCASETFSAIRTVRSF
GGEKRQISLFDNLAHAYQISGTKLGVLKSANESLTRVVVYVSLMALYILGGRKVNAGKLS
VGTMVSFIGYTFTLTFAVQGAVNTLSDLRATLASVERINSVLSAKDIDDSLAYGLAKELD
GKELDDSNGVYENGSVNKHFMSELKSSSSCSNLAWSGDIHLKEVHFSYPLRSDVEILNGL
DLTIECGKVTALVGPSGAGKSTVVQLLARYYEPTQGSITVAGEDIRVFDKREWSRVVSLV
NQDPVLVSVSVGENIAYGLPDDVVSKDEIIKAAKAANAHEFIISLPQGYDTLVGERGSLL
SGGQRQRIAIARALLKNAPILILDEATSALDATSERLVQEALNHLMKGRTSLVIAHRLST
VQNAHRIAVCSEGRITELGTHGELVAKGGSYASLVGTQRLAFE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcgatctccacctggagcgcgcgccttctcctcacccctgcttcctcccgcgccacc
ctgtggccgtggccccctcgccctcctgccgcaaaccccctctcgtcgtcctttcctcgc
aaccgtctccacttcgctcgcccgcgcccgccgcgcgcctacatctctgcgccggcgccg
ggccccgaggccgcctacgcgccgccctccctcgacgccgccgcggcggcagccgatgtc
gccgccgcgatttcatcctccgacgccgtcacctgggccggcgtctgggcgctgctctcg
cgccacagggcccgcatcgcggtctgcctcgccgcgctcgtcgcctgcaccgcctgcacc
ctctccatgccgctcttctcagggaggttcttcgagaccctgattgggagggggaatgag
ccattgtggaggctcttgtccaagatcgcggtgctgtacacgctggagcccgtcttcacc
atcatattcgtgatcaatatgaccatcatctgggagcagattatggcaaggctgcggagc
cagatatttcgaaggattctgatccaaaagatgttatttttcgatcgtcacaaggttggt
gagttgactggtttgttgacatctgatttgggttccttgaagagtattgtaagtgataac
atatccagagatcgtggactgagggcactctctgagatcattggtacactttgtatactt
ttcacactatcaactgagctagctccagttcttgggctccttatggtctccatctccgtg
ctagttgctattttcaagagctcaactgttcccacttttaaatcctatggaatcttgcaa
gcacgcatatcagactgtgcatcagagacattttcagctattcgtactgttcggtcgttt
ggtggtgaaaaacgacaaatttctttgtttgacaatttggcacatgcttaccaaattagt
ggcacaaaacttggagtgctgaaatctgctaatgaatcattaactcgagtagttgtctat
gtatccctaatggcgctttacattcttggtggcagaaaagtcaatgcgggcaaattatct
gttggaaccatggtatcttttattggttacaccttcacattaacctttgctgttcaagga
gctgttaatacccttagtgatctgcgtgccacattggcttccgtagagagaataaattct
gttctttcagcgaaggacattgatgattcacttgcgtatggtttagccaaagaacttgat
ggcaaagagcttgatgattccaatggagtgtatgaaaatggctctgttaacaaacatttc
atgtcagagctgaaatcatccagtagctgtagtaatctagcctggtctggtgacattcat
ctgaaagaagtccatttctcttatccactgagatcggatgtggagattttaaatggcctt
gaccttacaattgagtgtggaaaagtcacagcacttgtcgggcctagtggtgctgggaaa
agcacagtggtgcaacttctagcacggtattatgagccaactcaaggttccatcactgtc
gcaggagaagacatccgtgtatttgacaaaagagaatggtctcgagtagtatctctagtg
aatcaggatccggtcctagtctccgtgtctgttggagaaaatattgcttatggtctccca
gatgatgttgtctctaaggatgagataataaaagctgctaaagctgccaatgctcatgaa
ttcatcatctctcttccacaggggtatgacactcttgttggagagcgaggtagtctccta
agtgggggacaaaggcagaggattgcaattgcacgagccctcttgaaaaatgctcctatt
ctaatacttgatgaggctactagtgcactggacgccacaagtgagcgactcgtgcaggaa
gctctcaaccacttgatgaagggaaggacttctctggtcattgctcacaggctgagcacc
gtacagaatgcacatcgaattgctgtttgctcagagggcaggataactgaactggggacg
cacggagaactggttgctaagggaggcagttatgcatcacttgtcgggacacaaagactt
gctttcgagtaa
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