Miscanthus floridulus: 136541737
Help
Entry
136541737 CDS
T10264
Name
(RefSeq) polyadenylation and cleavage factor homolog 4-like
KO
K14400
pre-mRNA cleavage complex 2 protein Pcf11
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
136541737
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
136541737
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
136541737
NCBI-ProteinID:
XP_066389896
LinkDB
All DBs
Position
3:complement(61892217..61898162)
Genome browser
AA seq
1050 aa
AA seq
DB search
MRASASAVPMEASASARRSAAGPDPGGAKKPRLAQPPPPRDPRSYAAAASSNGAASAAEQ
ALVDELLGQYRTALGELTFNSKPIITNLTIIAGENLQAAKPIAALICANILEVPSEQKLP
SLYLLDSIVKNIGKDYVKHFSARLPEVFCKAYKQVDPSIHHSMRHLFGTWKGVFPLPPLQ
MIEKELGFQSSANGSSAAPSRTDSQSPRPSNSIHVNPKYLEARQQLNQPTKGILGSGAKT
AVIADTGDDIERANRLGTDRSAGRRLEAPNARPNIQHTQRDPFSNPVHEKQAGRDVRGLG
FSNISQQAVVGTGQVRSKPKGQDGIGGPYYASGVGSSEEQFDRRGNFYASKDVRPSGSVR
LDSALLPTPSINADRVVRPSSNKSWKHSEEEEYVWDDVHSKAAEYGGSNNVIKGEWMSDD
GNAKFANLQRAKWAEAGPVERIDPNTHKLDNVSRFGLAAGQERRISAYMDQEEYLLGKRE
VEARIDREIRPEGQQFPPPRGSSLWVSQEKTLPDIGLDPRISRFSNQPAERSTIYSGTMS
ASITSSVPVGLSGLYAGRSSLDTANSVPIRSTEAFGQQKHRYWSSSPPQAHSPSSTAPFA
RQGSPNPAESDFYPSRSFSQLGQNPQEEYSQRALPVLAKDSHVVVHNDGLTQGQPSLQAT
QQTQKYPTLQSKSHIKPSDPLQASFSRENSPSLFRPSQLGEVSLPSDSTPISSDLTSASN
LLAGLIKCGFKPNNHSDAQLLGPSGSLPVASLSLQNTAGENTTSHTQTPDTSRPPLPPGL
PPPPSTQSAEKAAPLSSLLSSLVAKGLISSPASDSSNAALSQPNKASSMNAKDVTASAVP
LPALKPLVGKVSSNSDSSAPTNASLPKAIEIKMGDLIGLEFKPEKLRKYHEHVISSLFDD
QSHQCKTCGNRFRVEELSLHTSSCGPRESETIYTGIAPKRWYPSKNIYIHGSHEIEDSTE
ASDGDLGSTEEVCEFMVPADERQSICALCGEPFDDIYSLEKGNWMYKDAVFLDYPKGESS
CGNNVEPEEHVPIVHVRCMPRGSNDGMEVD
NT seq
3153 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcctccgcctccgcggtccccatggaagcctccgcctccgcccgcagatccgcc
gcgggccccgaccccggtggcgccaagaagccgcgcctcgcgcagccgccgccgccacgg
gaccccagatcttacgccgccgccgcttcctccaatggcgccgccagcgccgccgagcaa
gcgctggtcgacgagctgctcggccagtaccggactgcgctcggggagctcaccttcaac
tccaagcccatcatcaccaacctcaccatcatcgccggcgagaacctccaggccgccaag
cccatcgccgccctcatctgcgccaacatcctcgaggttccaagtgaacagaaactacca
tcactatatctacttgacagtattgtaaaaaatattggaaaagattatgttaaacatttc
tcagcaagattaccagaggtgttctgcaaggcatataaacaagttgatccttctatacat
catagcatgaggcacctttttggaacatggaaaggagtgtttcctcttcctccgctccaa
atgattgagaaggaacttggttttcagtcatctgccaatggatcgagtgctgcaccatca
aggactgattctcaatccccgcgcccatccaatagcatacatgtaaatccaaaatatttg
gaagcgagacagcagctcaatcaaccaactaaggggatacttggaagtggtgctaagaca
gctgtaattgctgatacaggcgatgatattgagagggctaacaggctaggtactgataga
agtgcagggagacgattagaagctcctaatgctagacctaacatacagcacactcagagg
gacccttttagcaatcctgttcatgaaaaacaggcaggtagagatgtgaggggccttgga
ttctccaacatttcacagcaggctgttgtgggaactggtcaagttcgctcaaaacccaaa
ggtcaagatggaattggggggccttattatgcctctggtgttgggtcttctgaagaacaa
tttgacaggcgcggcaacttttatgcaagcaaggatgttcggccttcaggatctgtacgt
ttggatagtgcacttcttccaactccttcaattaatgccgatagagttgttaggccttca
tcaaacaaaagctggaagcactctgaggaagaagaatatgtttgggatgatgtacactct
aaagcagcagaatatggtggtagcaataatgtaataaaaggagaatggatgtctgatgat
ggcaatgctaagtttgcaaacctccaaagggctaaatgggcagaagcaggacctgtggaa
cgtatagatcccaacacacataaacttgataacgtgtcaagatttggacttgcagcaggc
caagaaagaagaatttcagcatacatggatcaggaagagtaccttcttggcaagcgtgag
gtggaagcaagaattgatagggaaattaggcctgaaggacaacagttcccaccacctcga
ggttcctctctctgggtgtcccaggaaaaaacactcccagacattgggttggaccctagg
atatcaaggttttcaaatcagccagcagagaggtccaccatttatagtggcaccatgtca
gcaagtatcacttcatctgtacctgttgggttatcaggactctatgctggaaggtcaagc
ctagatactgcaaatagtgtgccaataagatcaactgaagcttttgggcagcagaagcat
agatattggtcatcttcccctccacaagctcactcaccttcttctactgcaccctttgca
cgccagggttctccaaatcctgccgagtctgatttttatccttccagatcattttctcaa
ttgggccaaaatcctcaagaagaatatagccaaagagcattgccagtacttgctaaagat
tctcatgttgtggttcacaatgatggacttactcagggccaacctagtctacaggcaacc
cagcagacacaaaagtaccctaccttacagtcaaagtcacatattaagccatctgatcca
ttgcaggcaagtttttcgcgtgaaaattctccatcactgttcagaccttcccagcttgga
gaagtctctttacccagtgattccacccctataagctcagatctgacaagtgctagtaat
ttgttggctggtctcataaagtgtgggttcaaaccaaataaccacagtgatgcacaactt
cttggtccaagtgggtcacttccagtggcttctttatcacttcaaaatactgctggtgaa
aataccacttcgcatacacagacaccagacacttctcgtccaccattgccaccgggtctg
ccaccacctccatcaacacagagtgcagagaaagctgcgccgctctcgagtcttctcagt
tccctggttgcaaagggattaatctcttcgccagcttctgattcatccaatgctgccctt
tcacagccaaataaagcatcaagcatgaatgctaaagatgtcacagcttcagctgtgcct
ttgccggctctgaaacctttagttggtaaggtgtcatctaattctgattcatctgcccca
acaaacgcttcattacccaaagctatcgaaattaagatgggtgacctcattggcctggag
ttcaagccagagaaacttcgcaagtaccatgagcacgtgattagcagcctctttgatgac
caaagccatcagtgtaaaacctgtggtaataggttcagggttgaagaactgagcttgcat
acatcaagctgtgggccaagggagtctgagacaatctatactggtatcgcacctaaaaga
tggtaccctagcaagaacatttacatccatggatcacatgaaattgaggacagcactgag
gcttctgatggagatttaggttctacagaagaagtgtgtgagtttatggtccctgcagac
gagaggcaaagtatctgtgcactatgtggggaaccatttgatgatatatattctcttgag
aaggggaactggatgtacaaggatgcagtgtttttggattaccccaagggagaaagcagc
tgtggaaacaatgttgagcctgaagagcatgtgcccatagtccatgtaagatgtatgcca
agaggctcaaatgatggcatggaggttgactag
DBGET
integrated database retrieval system
