Miscanthus floridulus: 136541941
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Entry
136541941 CDS
T10264
Name
(RefSeq) transcription initiation factor TFIID subunit 2-like
KO
K03128
transcription initiation factor TFIID subunit 2
Organism
mflo Miscanthus floridulus
Pathway
mflo03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
136541941
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136541941
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136541941
03036 Chromosome and associated proteins [BR:
mflo03036
]
136541941
Peptidases and inhibitors [BR:
mflo01002
]
Metallo peptidases
Family M1
136541941
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
136541941
Coactivators
SAGA/TFTC/STAGA complex
136541941
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
136541941
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M1
Peptidase_M1_N
HEAT_2
Motif
Other DBs
NCBI-GeneID:
136541941
NCBI-ProteinID:
XP_066390227
LinkDB
All DBs
Position
3:96966883..96988580
Genome browser
AA seq
1388 aa
AA seq
DB search
MAKARKQKGDGGGAGGGGGATVLHQKLCLSIDMENQLIYGYTEIKVLLAENDTFALHADN
MTIRSILVDGETVEFDYSPHWKNESDQPNWSSISCLKTAADAACSTYTLSLNREATPNLI
VSSERSVKSMTEQQLDENSEKHEENSGRLEEHGGKPVQTSYDQIVNGCNGSAVEEGIENS
AVEEGKEKEKEKEEENGNEKSKENGNESENEKVKNIKMVHIDYILEKAETGIHFVGNVMH
SSSQIRRAHCWFPCVDSSTQRCPFDLEFTVSTDFIAVSNGDLLYQVLSKEDPSKKTYVYK
LNTPVSAQWISLVVGPLEVLPDQNDINVSHICLSPALAKLQNTIACFHDAYRCYEDYLAA
PFPLGLYKQIFLPSEMTVLPASLGASTCIFSSDILHDEKVIDQIIGTRIKLAYALAKQWF
GIYTSAEEPNDEWLLDGLAGFLTELFIKRYLGNNEAHYRRFKANCTVCESDVSGATALSS
TAASSDLYGTQTIGLYGKVRSLKAVAVLQMLEKQMGPDSFRKILQVIVAPNRASRTLSTK
EFRHLANKVGNLERPFLKEFFPRWVESCGCPIMRLGISYSKKRNMIELAVSRGCTAKATP
DPYTHTNGDPREGDAGWPGMMSVRVHETDGAYDNPVLPMAGEALQVVEIQCHSRLAAKRV
WKSKKNTKLDGSDDNIDASTQENRTSVDSPLLWIRVDPEMEYLAEIHFHQPVQMWINQLE
KDKDVISQSQAISVLEKLPQLSFAVINALNNFLNDTKAFWRVRIEAAYALAVTSSEATDL
AGLLHLVKFYKSRRFDADIGMPRPNDFHDVPEYFVLEAIPHAVALVRSSDKNSPKGAIEF
ILQLLKYNDNNGNIYSDVYWLSAMVQAIGELEFGQQGMGFLSSLLKRIDRLLQFDNFMPG
YNGVLTVSCIRTLARIARRVSSSVCLDRICELIAPFRDMDKPWKVRIEASRVLIDLELHH
KGLDAALLLFLKYVDEEKSLRGATKLAVHVLRICQASIVPYANDQINLTTLISLLHLLAG
TKAYNNVFLRHHVFCIMQVAAGRSPTLFGVPKVVTPPPVVKDICSDQHTKADSSIPQPSK
PQEPSTSTPSVREVLPTSGPTKDADNISNCSERRNVVKLRVKLTASSSKASDADHRGHSH
GGRNENELGPCSSMSVDAPMVGAANEPLNVSNHNIEEQNSCHDRESRMSANVSNAKLMDR
HEISKELQCTADSRLDALPKDQFSPAINPPEVLDKPGSQLEGVSTSYDGNQAPESVNGVE
TKERKKKDKKDKKRKRDEKRDKKDDPEYLEKKRLKKEKKKMEKELARKQLEGEGRATPEQ
RKTVKPSGSQEVLPARPPAPVLSAEPAPARSSEPQVSSKETTVDTARTAAKPRIKIRVKP
LIRKPEGN
NT seq
4167 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaggcgaggaagcagaagggtgacggtggcggtgcaggcggaggcggaggcgcc
accgtgctccaccagaagctctgcctctccatcgacatggagaaccagctgatctacggg
tacactgagataaaagttcttctagctgaaaacgacacatttgctctacatgctgacaat
atgacgatcaggagcattctggtggatggtgaaactgttgagtttgactattcccctcat
tggaaaaatgaaagtgatcaacctaattggtcttcaatatcatgtttgaagactgctgct
gatgctgcatgttcaacgtatactttgtctctaaatcgagaagctacaccaaatcttatt
gtgtcatctgagagatcagtcaagtcaatgactgagcagcagttagatgaaaacagtgaa
aagcatgaagaaaatagtggaaggcttgaagaacatggtggaaagcccgttcaaacttcc
tatgatcaaattgttaatggctgcaatggttctgcagtggaagagggaatagaaaattct
gcagtggaagaaggaaaagaaaaggaaaaggaaaaggaagaggaaaatggaaatgagaag
agcaaggaaaatggaaatgagtctgaaaatgaaaaggtgaagaacataaaaatggttcac
atagattatattttggagaaggctgaaactggcattcacttcgttggcaatgtcatgcat
agcagtagtcagataaggcgggcacactgttggtttccttgtgttgatagttccacacaa
cgctgtccatttgacctagaatttacagttagcacagatttcatcgctgtcagcaatggt
gacttgctttaccaggtcttaagtaaggaagatccttcaaaaaaaacttatgtgtataaa
ttgaacactccagttagtgcacagtggatatccttggttgttggtccgcttgaagttctc
cctgaccaaaatgacataaatgtctcacacatctgtttatcccctgctttggcaaagctt
cagaacactattgcatgtttccacgatgcatacaggtgttatgaagactaccttgctgca
ccgtttcccttaggtttatacaagcagatttttcttccatctgaaatgactgtattacca
gcaagcttaggagcctccacgtgtatcttcagttctgatatcttgcatgatgagaaggtt
atagatcagataattggcacaagaatcaaactggcttatgcccttgcaaagcaatggttt
ggaatatacacaagtgcagaggagcccaatgacgaatggctgttggatggtttggctggt
tttctaactgagttatttatcaagcgttaccttgggaataatgaggcgcattataggcgt
ttcaaggctaactgcacagtatgtgagtctgatgtcagtggtgcaactgctttgagctct
actgctgcttcaagtgatttatatggaactcaaacaatcggtttatatgggaaagttcga
tcgttgaaagctgtagctgttcttcaaatgttggagaagcagatggggccagactccttt
cggaagattttgcaggtgatagtggctccaaatcgtgcctctagaacacttagtacaaaa
gagttcaggcaccttgcaaataaggttggtaacctcgaacgcccattcctgaaagaattc
tttccacggtgggttgaatcttgtggatgtccaattatgagattgggaatctcatatagc
aaaaaacggaatatgattgaattagccgtttcaaggggttgcacagcaaaagctacacca
gatccttatactcacaccaacggtgaccctagagaaggcgatgctggatggccaggaatg
atgagtgtacgtgttcatgagactgatggggcgtatgataatccagttctgccaatggct
ggtgaagctttacaggtggtggaaatacagtgtcattccagactagcagcaaagcgcgtt
tggaaatcaaaaaagaacacaaaacttgatggttctgatgacaacatagatgcctctact
caagagaaccgcacaagcgtggattcacctttgttgtggattagagtagacccggagatg
gaatatcttgctgagatccattttcaccagccagttcagatgtggatcaatcagttggag
aaagacaaagatgttatatctcaatcgcaggcaatatctgtcctggagaaattacctcag
ctgtcttttgctgtgattaatgccctcaataatttcctaaatgacacaaaggccttctgg
agagttagaattgaagcagcatatgcactagctgttacatcatctgaggcaactgattta
gctgggttgcttcatctggttaagttctataaaagccgccgctttgatgcagatattgga
atgcccaggccaaacgactttcatgatgtcccagagtactttgttcttgaggcaatcccc
catgcggtagctcttgttagatcatcagacaagaatagcccaaaaggagccattgagttt
attcttcagctactgaagtacaatgataacaacgggaatatttactctgatgtgtactgg
ctatctgcaatggtccaggcaataggcgaactggaatttggccagcagggcatgggcttc
ctatcctcccttctcaagcgaattgatcggctcttgcaatttgacaactttatgcctggt
tataatggggtcttgactgtcagctgcattcgtacccttgcacgaatagcaaggagggtg
tcatcttctgtttgtcttgaccgcatttgtgaattgattgcccctttccgcgacatggac
aaaccatggaaagttcgaattgaagctagcagggttcttattgatcttgagttacaccat
aaaggacttgatgcagctcttttgttgttcttgaaatatgtagatgaagaaaagtctttg
cgaggagcaacaaagttggctgttcatgtcttgcgtatatgtcaagcaagtattgttcct
tatgccaatgatcaaataaatttgacaactctaatcagtcttcttcatctgcttgctggc
acaaaggcatacaataacgtatttcttcgtcatcatgtgttctgtataatgcaagttgcc
gctggaaggtccccaacattatttggtgttccaaaggtcgtcacaccccctccggtggtc
aaggacatatgtagtgatcagcacactaaagctgattcctcgattcctcaaccatcaaag
cctcaggaaccttccactagcactcctagtgtccgggaggtcttacctacctctggaccc
actaaagatgctgataatatatctaactgcagcgaaagaaggaatgtggtcaaacttagg
gtgaagcttactgcgtcttccagtaaagcatctgatgctgaccacagaggccattctcat
ggtggaagaaatgaaaatgaactgggtccatgtagctcaatgtcagtggatgcccccatg
gttggggcagcaaatgaaccattaaatgtaagcaatcataacattgaggaacagaactca
tgtcatgaccgtgaatcaaggatgtcggcaaacgttagcaatgctaagctaatggacagg
catgagatttccaaggagctacagtgtactgctgattcaaggctggatgctcttcccaag
gatcagttctctcctgccattaatccgccagaagttttagacaagcctggcagtcagctt
gaaggtgtctccaccagctatgatggaaaccaagctccagaatctgtgaatggagtggaa
acgaaagagagaaagaaaaaagacaagaaagataaaaagcggaaacgtgatgaaaaacga
gataagaaagatgacccagagtatctagagaaaaagcgacttaagaaggagaagaagaaa
atggagaaagagttggccagaaagcagctagaaggtgaaggaagagctacccctgaacag
cggaaaacagtgaaaccttcaggttcacaggaagttttgcctgcaaggccaccagctcca
gtgctaagtgctgaaccagctcctgctcggagctctgaacctcaggtatcaagcaaggaa
acaactgtagatactgcacgtacagcagccaaaccaaggataaagatcagagtcaagccc
ttgataagaaaacctgaagggaactaa
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integrated database retrieval system
