Miscanthus floridulus: 136542081
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Entry
136542081 CDS
T10264
Name
(RefSeq) nuclear pore complex protein NUP98A-like
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136542081
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136542081
03036 Chromosome and associated proteins [BR:
mflo03036
]
136542081
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
136542081
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
136542081
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
136542081
NCBI-ProteinID:
XP_066390462
LinkDB
All DBs
Position
3:complement(111386982..111394203)
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AA seq
933 aa
AA seq
DB search
MFGSTNPFGQSSTSPFGQTSFGTPQGFGQSSTAANNPFAPKPFGSPTTTFGAHTGSSLFA
TTSTGAFGQQQSTPAFGTTSTGAFGQQQSTPTFGTPSSSPFGSSTPAFGATPTPAFGATS
SGSLFGQKPSFGGFGSSPSQSSPFGSTFQQTQPTFGSSTFGASTTPAFGTTTTPAFGTTT
PAFGTTTTPAFSATITPAFGSTSTSLFGASSTPAFGSTAFGTSATGFGTSGTTTFGVSST
TPGFGSSSTPSFGTSASAFSFGSSPSFGQTTLSSGSTPFGATPSPFGAAAPAFGSQTAAQ
AFGQPQFANQAGGTRIKPYAQTPDVDSATSGTQPAAKLDSISAMPEYKDKSHEELRWEDY
QRGDKGGPNPSGTPAAAPSFPSSQQNAFAPTSNPFNPPATNPSNPFNPPATNPFSTINPY
PFASKPAPTISSPFTSFSNASVASSSPFTSSTSTTMFGQTGVSTFPASTSPSVFVNTNPA
SGTSSLFGTSMMNNPSPFGTSSSFANTQSAPLFSSSFAQPISSTPAFSSGSLFGSTNPGS
LFGSSGPSLFSTPSAAAQTSNMFSIQPPPIQPASTGGFPGFSNTTNQALIGQPTPSQSSM
VMQPAPVSNPFGTLPAMPQMSIGNGGSSPSVQYGISSLPVAEKPLQSRALCMAVPRHLSQ
RRIKLLPRKYNPISDVKVPFFADDEESPATPKADAFFIPRENPRNLVIRPIEQWPLQRET
DQQLTLKNATDLNKYEDASTESERGKSAMSPSSRPPAVENDNQHEARAMAQHENGNVTSV
KRLLPKLPRADYFTEPSIEEIAAKERAQAGYCGQVRDFVVGRHGYGSIKFLGETDVRCLD
LESIVEFNNREVIVYKDDSKKPPVGEGLNKAAEVTLLNIKCVNKKTGEQYREGARVERYR
EMLVKKAEEQGAEFVSFDAAKGEWKFRVKHFSA
NT seq
2802 nt
NT seq
+upstream
nt +downstream
nt
atgttcggctccaccaacccattcgggcagtcgtccaccagcccatttggccagacctca
tttggaactccgcagggattcggccagtcttccactgctgccaataatccctttgcccca
aaaccgtttggcagcccgaccacaacttttggggcacacactggaagctcgctctttgca
actacatctactggtgcctttggccagcagcaatccactcccgcatttggcacaacatcc
actggtgcctttggccagcagcaatccactcccacatttggcactccatcctcctctcca
ttcgggagctctacgccagccttcggtgcaacccccactcctgcctttggtgccacatcc
tctggatctttgtttggacagaagccaagttttggggggtttggatcatctcctagccag
tcaagtccttttggtagcacgttccagcaaacacaaccaacatttggcagcagcactttt
ggtgcatcaactacgccggcatttggtaccacgactacgccggcatttggtacaactaca
ccagcctttggcaccacaactacaccggccttcagtgccacgattaccccagcatttggt
tcaacatcaacatctttattcggtgcttctagcaccccagcgtttggttctacagccttt
ggtacatctgctactggttttggaacttcagggaccacaacatttggtgtgagtagtact
actccaggttttggatcttcaagcacaccttcatttggcacatcagctagcgccttcagt
tttggctcttcaccatcttttggacaaacaacactttcctctggtagcactccctttgga
gcaactccgtcaccttttggtgcagcagctcctgcatttggctcacagacagcagcacaa
gcttttgggcaaccacaatttgctaatcaagctggaggaaccagaataaaaccttatgct
caaacaccagatgttgacagtgctactagtggtactcagcctgctgcaaaacttgattcc
atatcagcgatgcctgaatacaaagacaagagtcatgaagaattgaggtgggaagactat
cagcgtggagacaaaggtggaccaaacccttctggaactccagcagcggcacctagcttt
ccatcatcacaacagaatgcttttgctccgacaagcaatccatttaacccgcctgccaca
aacccaagcaatccatttaacccgcctgccacaaacccattttcaacaatcaatccatat
ccatttgcttctaagcctgctccaactatttcttcaccattcacctcatttagcaatgca
tcagttgcaagttcgagcccattcacatcatccactagtaccacaatgtttgggcaaaca
ggtgtttctacatttccagcaagtacttcgccatcagtatttgtaaatacaaatcctgct
tctggtacatcatcgttatttggcacatcaatgatgaataatccaagtccatttggcacc
agctcatcgtttgctaacactcaatcagccccactattttcctcatcatttgctcaaccg
atatcaagtacaccagctttctcctctgggagcctattcggttcaactaatcctggcagt
ctgtttggcagcagcgggccttcacttttttcaacaccatctgccgctgctcaaacttca
aacatgttctccatccaacctcctccaattcaaccagcttctacaggtggattccctggt
ttttccaacactacgaatcaggccttgattggacagccaactcctagccagtccagtatg
gtcatgcagcctgctcctgtttcaaatccatttgggacgcttccagcgatgcctcagatg
tctattgggaatggtggatcttcaccatcagttcaatatgggatatcaagtttgccggtt
gctgagaagcctcttcaaagtagagcattgtgcatggcggttcctaggcacttgtcacag
agaaggataaaactgctgccgagaaaatataatccaatatctgatgtcaaggttccattc
tttgctgatgatgaagaatctccagcaacaccgaaggcggatgcttttttcatccctaga
gagaacccaaggaatctggtaattcgtccaattgagcagtggcctttgcaaagagaaact
gaccagcaattgactttgaagaatgctactgatttgaacaaatatgaagatgcttccact
gaaagtgagcgtggtaagtctgccatgtcaccaagcagcaggcctcctgcagtggaaaat
gacaatcagcatgaggccagggccatggctcagcatgagaatgggaatgttacttcagtc
aagaggctattgcctaagcttccacgtgcagattacttcacagagcctagtatagaggag
attgcggccaaagaacgtgcgcaggcaggctactgtggtcaggtcagggactttgttgtg
gggcgacatggctacggcagcatcaagtttttgggggagaccgacgtgagatgtctagat
ctggagtcaatcgtggagttcaacaaccgggaggtgattgtgtacaaggatgacagcaag
aagcccccagtgggtgaggggctgaacaaagctgcagaggtgactcttctgaacatcaag
tgcgtgaacaagaagaccggggagcagtaccgcgagggggcaagggtggagaggtacagg
gagatgctggtgaagaaggcggaggagcagggtgcagagtttgtgtccttcgacgctgcc
aagggagagtggaagttcagggtgaagcacttcagtgcctag
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