Miscanthus floridulus: 136542118
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Entry
136542118 CDS
T10264
Name
(RefSeq) DNA topoisomerase 3-beta isoform X1
KO
K03165
DNA topoisomerase III [EC:
5.6.2.1
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03440
Homologous recombination
mflo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
136542118
03460 Fanconi anemia pathway
136542118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mflo03032
]
136542118
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136542118
Enzymes [BR:
mflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
136542118
DNA replication proteins [BR:
mflo03032
]
Eukaryotic type
DNA Topoisomerases
136542118
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Bloom's syndrome complex (BTR)
136542118
FA (Fanconi anemia) pathway
136542118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_TOP3B
Toprim
Motif
Other DBs
NCBI-GeneID:
136542118
NCBI-ProteinID:
XP_066390503
LinkDB
All DBs
Position
3:113485750..113495483
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AA seq
905 aa
AA seq
DB search
MNGSPKKRTQRRTGTALATPLLFGFPPIRSPASPPVPMAPKVLMVAEKPSIALSIASALS
GGRMFTRKGSTDVHEFDGTFQGSYANFKVTSVIGHVLSVDFPPAYQNWEGTDPMDLFEAP
VLRSECNPKAHIRRHLAQEAQGCTYLILWLDCDREGENICYEVIECTGIPENEAGRRIFR
ARFSSVTEKDILTAMDNLVLPNKDEALSVDARQEIDLKVGVAFTRFQTRYFQGKFGNLDS
RVISYGPCQTPTLGFCVQRYQQITTFKPEKFWSLKTYIIKDNDEIQLEWDRKKLFDFDVT
VMFQKMVISDGTLKVADVSVKEECKTRPSGLNTVNMLKVASSALGIGPQTAMHLAERLYT
QGFISYPRTESTAYPSSFDFRGALAALLNNPLWSNDVRTLLDAGFVKPRQGHDAGDHPPI
TPMRSATEAALGTDAWRLYQYICQHFIGTVSPDCRYTRTAIEFTSGGETFHCVGYRVTSK
GFTSIMPWLAVSENSLPAFKKGDSVSIHKVDIYEGSTTPPDYLTESELISLMEKNGIGTD
ASIPVHINNICERNYVQVNSGRRLVPTPLGTTLIRGYQCIDADLCLPDIRSFIEQQITLI
AKGKADHLRVIQHVIQQFMKKYSYFVKKIENMDALFEAQFSPLADSGRLLSKCGKCGRYM
KYISTQPMKLYCITCEDVYYLPQNGSIKLYKEIICPLDGFELLLFSMVGPDAKSFPLCPF
CYNCPPFEGIDKLFGALKLDDTGKVGKGAGMPCFLCPHPTCKQSMITQGVCACPECSGTL
ILDPVSAPKWRLYCNMCNCIVLLPHAAHRITTTDKKCLTCESTIIEVDFNKKTTPLQDGA
TLHEGCILCDDLLHSLIEMKHGKSFFMRRGRGRGRGRGRGRGSSRGRGRRGNSRYDDPKM
SFRDF
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgaatggatctccaaaaaagcgcacgcagcgccgaacgggcacggcccttgcaacccct
cttctctttgggtttcctcccattcgttcccccgccagtccgccggtccccatggcgccc
aaggttctcatggtcgcagagaagcccagcatcgcgctctccatcgcctccgccctctcc
ggcggccgcatgtttacaaggaagggaagcacagatgtccatgagtttgacggaacattt
cagggttcttatgcaaacttcaaagtgacatcagtcattggacatgtcttaagtgtagat
ttcccccctgcatatcagaactgggaaggaactgatccaatggacctatttgaggctcca
gttctgagatctgaatgcaacccaaaggctcatatacgcaggcatctagctcaagaagct
caaggctgcacttatttgatactttggctggactgtgaccgagaaggagaaaatatatgc
tatgaagttattgagtgcactgggattcctgaaaatgaggctggcagaagaattttccgt
gctagattttcatctgttactgagaaagacatattgaccgccatggataatcttgttctg
ccaaacaaagatgaagcgctatcagtggatgcccggcaagaaattgacttgaaggttgga
gtagcatttactcgatttcagactcgatatttccaaggaaaatttggaaaccttgattca
agagtgatttcgtatggtccatgccaaacacctacacttggattctgtgtacaacgctat
cagcaaatcaccacattcaaaccagagaaattctggtccttgaaaacatatattatcaaa
gataatgatgaaatacagctagaatgggaccggaagaaactttttgattttgatgttact
gtaatgttccagaagatggtcatcagtgatgggactctaaaagtagcagatgtatcagtg
aaggaggagtgcaaaacccgtccatctggccttaatacagttaatatgcttaaggttgca
tcaagtgcgcttggtattggacctcagacagccatgcacttggcggagcggctttacact
caaggattcatcagttatcctcgtacagagagcactgcatatccatcatcatttgatttt
cgaggtgcacttgctgcactattaaataatcctctatggtccaatgatgtccggacatta
ctggatgctggttttgttaagcctcgtcaaggtcatgatgctggggaccatcctccaatc
actccaatgaggtcagcaacagaagcagctttaggaactgatgcttggaggctgtaccaa
tacatatgccagcacttcattggaactgttagtcctgattgtagatatacaaggactgcc
attgagttcacttcaggtggagaaactttccactgtgttgggtatcgagtcacttctaaa
ggatttacctctatcatgccatggctagctgtcagtgagaatagtcttcctgcatttaaa
aagggagactctgttagtattcataaggttgacatatatgagggaagcactacaccacct
gattacctcactgaaagtgaattgatctctctcatggagaagaatggcataggtacagat
gcatcaattcctgtacatataaacaacatttgtgaacgtaattatgttcaggtgaattct
ggaagaaggttagtaccgacacccctgggaactacgttgataagagggtatcagtgtatt
gatgctgatctctgcttgccagatatcagaagctttattgagcaacagattactctaatt
gcaaaaggcaaagctgatcatcttcgagttattcaacatgttattcagcaatttatgaaa
aagtactcttactttgtgaaaaagattgaaaatatggatgcgctgttcgaggcacagttt
tcacctttggcagattctgggcgcctactaagcaagtgtggaaaatgtggtcggtatatg
aagtacatttccactcagccaatgaagttgtactgtataacttgtgaggatgtctattat
cttcctcagaatggttcaattaagctttacaaggaaatcatatgccctcttgatggtttt
gagttgcttctgttctcgatggtgggacctgatgcaaaatctttcccattgtgccctttt
tgctataattgtcctccatttgaaggcatcgacaaactctttggtgctctcaagctcgat
gacaccggcaaggttgggaaaggggccggcatgccatgcttcctttgtcctcacccgaca
tgcaagcaatctatgatcactcagggagtttgtgcttgtcctgagtgtagtggtaccctg
attcttgatccagttagtgcacccaaatggcggctttactgcaacatgtgtaattgcatt
gtattactcccacatgctgctcacaggatcaccactacagataaaaaatgcctaacatgt
gaatctactatcattgaagttgatttcaacaagaaaaccacccctcttcaagatggagct
acattgcatgagggctgtatcttgtgtgatgatctgttgcattcactgattgaaatgaag
catggtaagtcattctttatgcggagaggtagaggcagaggtagagggagaggccggggc
agaggaagcagccgtggcagaggaagacgagggaactcaaggtatgacgatcctaaaatg
agtttccgggatttttga
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