KEGG   Miscanthus floridulus: 136542406
Entry
136542406         CDS       T10264                                 
Name
(RefSeq) tyrosyl-DNA phosphodiesterase 1 isoform X1
  KO
K10862  tyrosyl-DNA phosphodiesterase 1 [EC:3.1.4.-]
Organism
mflo  Miscanthus floridulus
Pathway
mflo03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    136542406
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136542406
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     136542406
SSDB
Motif
Pfam: Tyr-DNA_phospho FHA FHA_2 Yop-YscD_cpl
Other DBs
NCBI-GeneID: 136542406
NCBI-ProteinID: XP_066390919
LinkDB
Position
3:complement(128112424..128122336)
AA seq 689 aa
MASASRVRLGTLVPLTKDNAGSSNGSVSSIPIFQGSNVVGRDHLVVVDKRISRKHLSLHA
STDGSIEVVVEGPNPIMVRSKGQRLKVCAKEKAKIAHGDVLELIPGDYFVKYVDMGDEHK
STVPMNLSDLKKGKRHSEEDGAAVKRNRQIMEDEALARTLQMGFPCVKSQCTIKLCCVLS
KQESSAEDNTAVSGMTSVQKISSHDSAGSSGRNNERTRSVGPLKDMLPLTFRLMRVQGLP
SWTNTSSVSIQDVIQGEVLLAVLSNYMVDIDWLLTACPSLRKVPHVLVLHGQDGASLELM
KKLKPANWIIHKPPLPISFGTHHSKAMLLVYPQGIRIVVHTANLIHVDWNYKSQGLWMQD
FPWKDTNDMNKKVPFENDLVDYLSALKWPEFRVNLPEVGDVNINAAFFRKFDYRNSMVRL
IGSVPGYHVGPNIRRWGHMKLRNVLDEITFDKQFCKSPLIYQFSSLGSLDEKWMSEFACS
LSAGKSDDGSQLGIGKPLIVWPTVEDVRCSIEGYAAGSCIPSPQKNVEKDFLKKYWSRWK
ADHVGRCRAMPHIKTFTRYSGQNIAWFLLTSSNLSKAAWGALQKNNTQLMIRSYELGVLF
LPQMLQSIPQFSCTEKSHSSRDGVALGKTIKTKPVTLCWKGDEEDPSIVRLPVPYQLPPQ
PYGTQDVPWSWDRRYTKKDVYGSVWPRHG
NT seq 2070 nt   +upstreamnt  +downstreamnt
atggcgtccgcatctcgagtgaggcttggcactctagtcccccttaccaaggacaatgct
ggctcatcgaatggatctgtatcaagcattcccatattccaggggtccaatgtagtcggg
agggatcatttggttgtcgtcgacaagaggatcagccgcaagcatctgagcctccatgcc
tccactgacggctccattgaagtagtagtggaaggtccaaaccctataatggtgcggtcg
aaggggcagaggttgaaggtttgtgctaaagagaaagccaagattgcacatggcgatgtc
ctggaactgattcctggtgactatttcgtgaagtatgtggacatgggtgatgaacataaa
agtactgtaccaatgaatttgagcgacttaaagaagggtaagaggcatagtgaggaagat
ggtgcagcagtcaagaggaatagacagattatggaagatgaggctttggcaagaacacta
cagatgggctttccttgtgtaaaatcacagtgcaccatcaaattatgttgtgtcctatct
aaacaggaaagctccgcagaagacaacacagctgtttctggcatgacttctgtccaaaaa
ataagttcacatgacagtgctggttcttctggaagaaataatgagagaacacgctctgtt
ggtcctttgaaagatatgctcccattgacttttcggctcatgcgtgtccaaggtcttcca
tcatggactaacacttcctcagttagcattcaagatgtcattcagggtgaagtgcttctt
gctgtactctcaaattacatggtggatattgactggctgcttactgcgtgcccaagtttg
aggaaggttccacatgtcctggttctacatggacaagatggtgcttcattagagcttatg
aagaaactgaagcctgcaaattggatcatccacaaacctccactcccaatttcatttgga
acacaccattctaaggccatgttgcttgtatatcctcaaggaattcgaattgttgtgcac
acagcgaatttgatacatgttgactggaattacaaaagtcagggactatggatgcaagat
tttccctggaaagacacaaatgatatgaataaaaaagttccctttgagaatgatctagtt
gattatctcagtgcacttaagtggcctgagttcagggtaaatctccccgaggttggtgat
gtcaacatcaatgcagcattctttaggaaatttgactatagaaattcaatggtcaggttg
attggatcggttcctggttatcatgtgggccccaatattagaaggtggggccatatgaag
cttaggaatgttcttgatgaaatcacgttcgataaacaattttgcaagtcccctctgatt
tatcagttttcttccctggggtcacttgatgagaaatggatgagtgaatttgcatgctcg
ctgtcagctggtaaatcagatgatggatcacagctaggaatcgggaaaccactgattgtc
tggcctacggtggaggatgttcggtgctcaatagagggttatgcagctggtagttgcatt
ccaagcccacaaaagaatgttgagaaagacttcttgaagaaatattggtccaggtggaaa
gcggatcatgtaggtcgttgtcgggctatgcctcacataaaaacttttactcgttacagt
ggccaaaacatcgcatggtttctgcttacctcatcaaatttaagcaaagctgcttggggc
gctctgcagaagaacaacacgcagctaatgatacgctcatatgagctaggtgtattattc
ttgccccaaatgcttcaatcaataccgcagttttcatgcacggaaaagagccactcaagc
cgggatggcgtcgcccttggcaagacgatcaagaccaagccggtcactctttgctggaaa
ggtgacgaagaggatccatctattgtgagattgcctgtgccataccagcttcctccacaa
ccttatggcacacaagatgtcccttggtcatgggatcggaggtacacaaagaaggatgtg
tatggttccgtctggcctcgacatggctag

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