Miscanthus floridulus: 136544329
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Entry
136544329 CDS
T10264
Name
(RefSeq) protein argonaute PNH1-like
KO
K11593
eukaryotic translation initiation factor 2C
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136544329
03036 Chromosome and associated proteins [BR:
mflo03036
]
136544329
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
136544329
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
136544329
RNA interference (RNAi) pathway
RITS (RNA-induced transcriptional silencing) complex
136544329
microRNA pathway
RISC loading complex
136544329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Piwi
PAZ
ArgoL2
Retrotrans_gag
Ty3_capsid
ArgoMid
Asp_protease_2
RVP_2
Arc_capsid_dom
gag-asp_proteas
Motif
Other DBs
NCBI-GeneID:
136544329
NCBI-ProteinID:
XP_066392625
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All DBs
Position
3:122959974..122973106
Genome browser
AA seq
1096 aa
AA seq
DB search
MAVLEAAHGRRRRKGPHAGGGGGGAKDSIVASCSLMLCVTTPSKPSDPKPSKQTQILLDQ
MSKSADDDQSKWDQQEMKTQIELNNAKVDKCSADQQFIAQQVRANGQAVAQLTLRQFEEE
KSSASHGSSSLVYDDEEEHFLNMFAKDKNLQKPEQSNVPERLWVSSTTMHLEGNAAKWYQ
AYKQTHPKISWITFCLAMEQQFGADDYRNALTELIDLKQTGTVEDYTTKFEQLQFDITMH
SCHYDDLFFTSHYVSGLKDDIRAVVEPQVPTTIHRAAIIARIQQNVLDRGKNKYQKAPIL
HKPNPQHRTETKTQPVSGTLWRDRQLRDYRKVNGLCYTCGEKFEPGHIEVCSKRTKPHNN
ALVVNDLDRELSDDVLNQLAIEDALPEQFCQLSLNALTSTDTSNNIKLKTRVKNKFMLTL
LDSGSSHSFVSAQFTQLAGLPTVPMSPRKVKLANGEWIVADRMRHSPMQCDWHLKTLAFE
VNGRPVKLQAQALRGVRIEVTHRGEACQKYKIASLTTSPPSLQFFESSAGVQKSVADYFR
EAYKLEMHYDFLPCLQVGSDQRPNYLPMEVCKIVSGHQYWKKLDSQQVSKLMDSTCQRPS
NRENNIRQVVEHNDYNRTERASEFGMEVDYRPTSVQARVLPAPTLKYRGTGSESLCCPKD
GQWNMIKKQVVHGARVGNWACVNFCYELPRDVANIETYPIKFCSDLVKWSCTTGVDMDNL
RLPIYLVRPEQVENDLHRLCQDAENKLRVQKIDLLLAILPEKNGNLYGNFKRICETEIGI
MSQCCLDKNVRSAGPPYFANVAIKINAKFGGRNLEFANPKESLPVVSIEPTIIFGADVTH
PAALDDTAPSIASVVASQDWPKVANYNGIARAQGHRKELIDGLEDIVKELLLAFEERSKQ
RPKQLIFYRDGVSEGQFKQVLEQEIPEIEKAWKARYNEKPKITFIVVQKRHHTRLFPNDR
QWIDRSGNILPGTVVDKNICHPTEFDFFLCSHAGIKGTSRPTHYHVLRDDNKFTADALQS
LTYNLCYLYSSCQSVPPPAYYAHKLAFRARFYVNQGSSDVATSVGSFGSSAPAAAAAGPN
PLPEIKGELKRLMFYC
NT seq
3291 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgctagaggctgcacatgggaggcggcggcgcaaggggccacatgcaggcggt
ggcggcggcggcgccaaggactccatcgtcgcctcgtgctcactcatgctctgtgtcacg
actccatctaagccttctgatcctaaaccatccaagcagacccaaattctgttggatcag
atgtcgaagagcgctgatgatgaccagtctaagtgggatcagcaagagatgaaaactcaa
attgagttaaacaacgccaaggttgacaagtgttctgcagatcaacagtttattgctcag
caagttcgagctaatggccaggcagtagctcaactaaccctgcggcagtttgaggaggag
aaaagctctgccagtcatggttcatcgtccttggtgtatgatgatgaagaggagcacttc
ctgaacatgtttgccaaggacaagaaccttcagaaacctgagcagtccaatgtgcccgag
aggctttgggtgtcttctaccaccatgcatctagagggcaatgctgccaagtggtaccag
gcctataaacagacacatcctaagatctcttggatcaccttttgcttggctatggaacaa
cagtttggagctgatgattatagaaatgccctcactgagttgattgatctcaagcagaca
ggaactgtggaagactatactactaagtttgagcaattgcagtttgatattactatgcat
agctgtcattatgatgatcttttcttcacctcccattatgttagtggtctcaaagatgac
attagggcagtggttgagcctcaggtaccaacaactatacacagagctgctattatagca
aggattcagcaaaatgtgcttgatagagggaaaaacaagtaccagaaggctcctattctt
cacaagccaaacccacaacacaggactgagaccaagacacaaccagtttctggtactcta
tggagggatagacagctgagggactacagaaaagttaatggattgtgttacacctgtggg
gagaaatttgaaccaggacatattgaggtctgttccaagcgaaccaaaccacacaacaat
gctctggtggtgaatgacctagaccgagaactcagtgatgatgttctcaatcaactagcc
atcgaggatgctttaccggaacaattttgtcaattgtccctcaatgcattgaccagcact
gatacaagcaacaatattaagctgaaaaccagggtcaaaaacaagtttatgcttactcta
ttggacagtggcagttctcatagctttgtaagtgcccagttcacccaactagctggtttg
ccaactgtgccgatgtcccctcgcaaagtaaaacttgcaaatggggagtggatcgtggct
gatagaatgcgccatagtccaatgcagtgtgattggcaccttaaaactcttgcattcgag
gtgaatggacggccagtgaaattgcaagctcaagccctcaggggtgtgaggattgaagtc
acacaccgaggagaagcatgccagaagtacaagattgccagcctgacaaccagtcctcct
tctttacagttctttgaatcgtccgctggagttcagaagtctgtcgcagattacttcaga
gaggcatacaagctggaaatgcactacgattttctcccatgcctccaagttggtagtgat
cagaggccgaactacctccctatggaggtttgcaagatagtatctggacatcaatactgg
aagaagttggatagccaacaagtctctaaactaatggactcaacctgccagcgcccatct
aaccgtgagaacaacattcgtcaggttgttgagcacaatgactacaatagaactgagcgt
gcaagtgaatttggcatggaggttgactatcgtcctacttcagttcaggctagagttcta
ccagctcccactctgaagtaccgtggcactggatctgaaagtttgtgttgtccaaaggat
gggcagtggaacatgattaaaaagcaagtagtacatggtgcaagggtgggcaactgggcc
tgcgttaacttttgttatgaattgcccagagatgttgccaacatagagacttatcccatc
aaattctgctctgatctggttaaatggtcttgtactactggagtggacatggataacttg
agacttccaatataccttgttcgtcctgaacaagttgaaaatgatcttcataggctgtgt
caggatgctgagaacaagctaagagtgcaaaagatagatcttttgcttgctatactgcca
gagaaaaacggcaacttatatggtaatttcaaaaggatctgcgagacagagattggtatc
atgtcgcagtgttgcctggataaaaatgttagaagtgcaggtcctccgtactttgctaat
gttgctattaagatcaatgccaagtttggaggaaggaacttagaatttgctaatcccaaa
gaaagcttaccggttgtttcgattgaaccaacaattatatttggtgccgatgtcactcac
cctgctgctctagatgatactgccccttccattgcttctgttgttgcctcccaagactgg
cccaaggtggctaactataatggtattgcccgtgcacaaggtcaccgtaaagagctcatc
gatggcctggaagacattgtcaaggaactcctacttgcatttgaggaacggtctaagcag
agacctaagcagctgatcttctacagggatggcgtaagtgagggccaattcaaacaagtg
ctggaacaagaaatcccagagatagagaaggcatggaaagctcgttacaatgagaagcca
aagataaccttcatagtggtgcagaagaggcaccacacaaggctcttcccaaatgatcgc
caatggatagacaggagtggaaatattctacctggcactgtagttgataagaatatctgc
cacccaacagaatttgatttcttcctgtgcagccatgctggtatcaagggaacaagccgt
cctacgcattaccatgtgctgcgagatgacaataagttcactgcagatgctctgcagtct
ctcacatataacttatgctacttgtattcaagctgtcaatcggtacctcctcctgcatac
tacgcccacaagctagcgttccgtgcccgcttctacgtcaaccaaggctcctccgatgtg
gcgacaagtgtcggctcttttggttcatctgctcccgctgctgctgctgctggtccgaat
ccacttccggagatcaagggtgaactgaaaaggctcatgttctactgctag
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