Miscanthus floridulus: 136544940
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Entry
136544940 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: chromatin-remodeling ATPase INO80-like
KO
K11665
chromatin-remodeling ATPase INO80 [EC:5.6.2.-]
Organism
mflo Miscanthus floridulus
Pathway
mflo03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
136544940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mflo03036
]
136544940
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Chromatin remodeling factors
INO80 complex
136544940
INO80 complex (yeast)
136544940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DBINO
Helicase_C
ResIII
HDA2-3
DEAD
Motif
Other DBs
NCBI-GeneID:
136544940
NCBI-ProteinID:
XP_066393096
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All DBs
Position
1:complement(156823969..156836174)
Genome browser
AA seq
1514 aa
AA seq
DB search
MDPRRAPPRGGGANGGGGLSYSTLFNLEPLLNFRVPVPEDLACYGNSSSNGSPSSEGQGS
LLDQYNGVNDASHGLHRKRKRHLNGASDDDEADAYSNKITEEHYRAMLSEHVQKYRRSKF
KEGAFSSDPPRVATPQIKHKNGGKKTMKHASDFRDVATLDGVEASHEYNGIECVKTHGGF
NKLVASLDSTYLDMGDNIRYLVPEGYDKLASSLNLPVSSDIRVEEHFLKGMLDLRTLAAM
LGTDQKFEASNRGGLSEPLPQFESLKERVKVQKFSLQVTEDPFAIPEGAAGRIQRSIISE
AGNLQVHYVKVLEKGDTYEIIERSLPKKQIVKKEPSVIVKEESEKTYKLWQSLATKSIPK
HHRNFTALMKKQQVDAKRFSDSCQREVKLKVSRSLKLMRCAAIRTRKLARDMLIFWKRVD
KEQYELRKKEEREAAEALKREEELREAKRQQQRLNFLLSQTELYSHFMQNKAGGSAPPDE
EDVPDEDEEEDPEEAQLKREALRAAQHAVSQQKMKTNAFDSEIVRLRQTSESVLPTDDSS
SMDPSKIDLLHPSTMPEKSSVQTPELFKGVLKEYQLKGLQWLVNCYEQGLNGILADEMGL
GKTVQAMAFLSHLAEDKNIWGPFLVVAPASVVNNWAEELIRFCPDLKILPYWGPERMVLR
KNINPKRLYRRDARFHILITNYQILVNEEKLLRRVKWQYMVLDEAQAIKSSSSQRWKTLL
SFNCRNRLLLTGTPIQNNMAELWALLHFIMPTLFDSHEQFNEWFSKGIEGHAEHGGALNV
HQLSRLHAILKPFMLRRVKIDVIAEMTKKKEEIVPCKLSSRQQVFYQAIKNKISLNELLD
GSRGNLNDKKLLSLMNIVMQLRKVCNHPELFERNEGSSYFYFADIPNSLLSPPFGELQDV
HYAGKRNPIIFEIPKLVYEGIICNTENSGNICGFQNGYLNRLFNIFLASNIHRSAIPEVN
SSNESVLSSGAFGFTRLSNLCPVEASFLATASLFERLVFSVMQWNRNYTDEIMDAFLDSE
DPDIQSSQNDSTKVRAVARLLLSSTKGKPSLLRTKIGTGPSDGPYEALVLSHRDRLASNI
RLLRSAYAFIPPARAPPINVWCADRNFAYKFTDEMHDPWAKKLFLGFARTSEFNGPRQPV
ALHPLIQELNTDFPILEPMLQLPYRIFGSSPPMSNFDPAKMLTDSGKLHTLDMLLRRLRA
EGHRVLLFAQMTKMLDILEDYMNFRKFKYFRLDGSSAISDRRDMVRDFQNRNDVFVFLLS
TRAGGLGINLTAADTVIFYEIDWNPTQDQQAMDRTHRLGQTKEVTVYRLICKDTIEEKIL
QRAKQKNAVQELVMKGKHVQDDHLMRQEDVVSLLIDDTQIAHKLKEISMRAKDRQKKRRA
KGIKVDKEGDLTLEDLDDATATATATATAEAVDQDKTTSKKKKSSHKKHTNTHDNDNTDK
TGEPDVGDHPGSSHTENEXAEPRPKRSKRLMKSITDDKELAAAAVDHEEPANEAENHRAH
DYDGTEEAQDGTPA
NT seq
4545 nt
NT seq
+upstream
nt +downstream
nt
atggatccgcgccgcgcgcctccgcggggcgggggcgccaacggcggcggcgggctctct
tactccacgctgttcaacctcgagcctttgctgaacttcagggttcctgtaccagaagat
cttgcctgctatggtaatagcagctcaaatgggagtccaagcagtgaaggtcaaggatcc
ttgttggatcagtacaatggtgtaaatgatgcttcccatggcctgcatcggaagcgaaaa
aggcatcttaatggtgccagcgatgatgatgaggcagacgcctatagtaacaaaataaca
gaggagcactaccgtgctatgctcagtgaacatgtccagaagtaccggaggtcaaagttc
aaggagggtgcttttagttctgatcctcctcgtgtggcaaccccccaaataaaacacaaa
aatggtggtaaaaaaactatgaagcacgcaagtgatttcagggatgttgcgacattagat
ggggtagaagcctcacatgagtataatgggatagaatgtgttaaaactcatggtggtttt
aacaagcttgtagcatcccttgattcaacctatttagatatgggggataatatacgctac
ttagttccagagggttatgataagttagcatcatcccttaatctccctgtttcttctgat
atacgtgtcgaggaacacttcttgaagggcatgctagatttacgcaccctagcagcaatg
cttggtactgaccaaaagtttgaagcttccaatcgtggtggattatctgaacccctgcca
caatttgaatctctcaaggaaagggtaaaggtgcagaaattttctctgcaagttaccgag
gacccctttgcaattccggaaggagcagctgggaggatacaaaggtctattatatcagaa
gctggcaatttgcaggttcattatgtcaaagtcttggaaaaaggagatacatatgagatt
atcgagcgtagcttaccaaagaagcaaatagtaaagaaggaaccttctgtaattgtgaaa
gaagagtctgaaaagacttacaaactatggcagtctcttgctaccaaaagcatcccaaag
catcacaggaattttactgctttgatgaagaaacaacaagtagatgcgaagcgcttctct
gatagttgtcaacgagaggtaaagctcaaagtaagcaggtcactgaaactgatgaggtgt
gcggcaatacgtacaaggaagttggctagggatatgctgatattttggaaacgtgtagac
aaagagcagtatgagttgaggaaaaaagaggaaagagaagctgctgaagctttgaaacgt
gaggaggagctacgtgaagccaaaagacagcaacagaggctaaactttctgctgtcacaa
acagagctttacagtcatttcatgcagaacaaggctggtggctcagcacctcctgatgag
gaagatgtccctgatgaagatgaggaagaagatcctgaggaagctcaattgaaaagagag
gccttgagagcagcacagcatgccgtctctcaacaaaagatgaagacaaatgcatttgat
agtgaaattgtgaggcttcgtcaaacttctgaatctgttcttccaactgatgattcatct
agcatggaccctagcaagattgatctattacacccctcaacaatgcctgagaagtcatct
gtgcagacaccggagttgtttaagggtgtattgaaagaatatcagttaaagggcttacag
tggctggttaattgttatgaacaggggttgaatggcattcttgctgatgagatgggtctt
ggcaaaactgttcaggctatggcattcctgtctcatttggctgaggacaaaaacatatgg
ggcccctttctagtggtggctcctgcatctgttgtgaataattgggctgaggagttgatt
aggttctgccctgacctaaagatacttccttactggggcccagagaggatggttcttcga
aagaatatcaaccccaagcgtctgtatcgcagagatgctaggttccacattcttattaca
aactatcagatacttgtgaatgaagagaagcttttgagacgtgttaagtggcaatacatg
gtactggatgaggcccaggctatcaaaagttcaagcagccagcgctggaagacattactg
agcttcaactgtaggaaccgtctacttcttactgggacaccaatacaaaacaatatggct
gagttatgggcacttctccatttcatcatgcccactctatttgacagccatgaacagttc
aacgagtggttctcaaagggtattgagggtcatgctgagcatggaggagctttgaatgta
catcagcttagtagattgcatgctattttgaagccctttatgctccgccgggttaagatt
gatgtcattgctgaaatgaccaaaaagaaagaagaaattgttccctgcaaattgagttct
cgtcaacaagttttctatcaagctataaaaaataagatctcgcttaacgagttgcttgat
ggaagtcgtggaaatctaaatgataagaagttacttagcctgatgaatattgtcatgcag
ctacggaaggtctgtaatcacccagagctgtttgagcgcaatgagggaagctcttacttt
tactttgctgatatcccaaactcacttctttctcccccatttggggaattacaagatgta
cactatgcaggcaagagaaaccctataatctttgagattccaaagttagtttatgaggga
atcatctgcaacacggaaaattctggaaacatctgtggatttcagaatggatatttgaac
aggctgtttaatatatttttggccagcaatatccatcgctcagccattccagaagttaat
tcatcaaatgagtctgttctatcatctggtgcatttggctttacacgtttgtcaaatctg
tgcccagttgaagcttccttcctggctactgcttcattatttgagagactagtgttttca
gtaatgcaatggaataggaactacactgatgaaatcatggatgcatttcttgattcagaa
gatcctgacatccagtccagtcagaatgattccacaaaagttcgtgcagttgcccgattg
ttgctttcgtctacaaagggcaagcccagtttgcttaggacaaagattgggactgggcca
agtgacggcccatatgaagcactggtgctttctcaccgtgacaggcttgcttcgaacata
aggcttcttcgttcagcatatgcttttattccgccagctagagcaccacctataaatgtt
tggtgtgctgatcgaaattttgcctataagttcaccgatgagatgcatgatccttgggcc
aagaaactgttcctgggatttgctcgtacttctgagttcaatggtcctagacaaccagtt
gctcttcatcctttgatacaagaactcaatactgatttccccatccttgagccgatgctg
cagctaccctataggatatttgggtcttctccaccgatgagtaattttgatccagctaaa
atgctcaccgattctgggaagctccacaccttggatatgctactacggcgccttcgagct
gaaggtcatcgcgtgcttctttttgcccagatgactaaaatgttggacattcttgaggat
tacatgaatttcagaaaattcaagtatttcagacttgatgggtcttctgcaatctcagac
cgccgtgacatggtccgagatttccagaataggaatgatgtatttgttttcttgttaagc
acaagagctggggggcttggtattaatttgactgctgctgatactgttattttttatgaa
attgactggaatccaacacaagaccagcaggcaatggatagaacgcacagacttggtcaa
acaaaggaggtaactgtgtacaggcttatatgcaaagatactattgaggagaaaatatta
caaagagcaaagcagaaaaatgcagtgcaagagttggttatgaaggggaaacatgtccag
gatgatcatttgatgagacaagaggatgttgtttcattacttattgatgacacacagatt
gcacataagttgaaagaaatatccatgcgggcgaaggatcgacaaaagaaaagacgagct
aagggcatcaaggttgacaaagaaggagatttgacgctcgaagacttggatgatgctact
gctactgctactgctactgctactgcagaagctgtagatcaagataaaacaaccagcaaa
aagaaaaagagctcccacaagaaacatacgaatactcatgataatgacaatacggacaag
actggagagcccgatgtgggagatcatccggggagtagtcacacagaaaatgaanctgct
gaaccaaggcctaaaagatcaaaaaggctgatgaagagcattactgatgacaaggaatta
gctgctgctgctgtggatcatgaggaaccggcaaatgaagcggaaaatcacagagcccat
gactatgatggtacagaagaggctcaagacggcacaccagcctaa
DBGET
integrated database retrieval system
