Miscanthus floridulus: 136545709
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Entry
136545709 CDS
T10264
Name
(RefSeq) homeobox-leucine zipper protein ROC6-like
KO
K09338
homeobox-leucine zipper protein
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mflo03000
]
136545709
Transcription factors [BR:
mflo03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
136545709
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
136545709
NCBI-ProteinID:
XP_066393794
LinkDB
All DBs
Position
3:complement(51230107..51233055)
Genome browser
AA seq
725 aa
AA seq
DB search
MEEEGHKVNDYTNEDTDYTDDEDYNDEDYTPELETASKRQKRHTPEQIQELRAAFQRYDH
PDQPTRRVLGAKIGLQARQVQYWFQNQRSQMQAKALVQNSKVFQHENAVLMAENVSLRQA
ILTKSCFTCGGTTVPIELPAENRRLVMENARLRDENMRATALLNQILLSVPPAERPPVIT
SGRPAVLSASEGARRADRAARLRAHAEAAMDQFLLLATKGEPLWLPTPDGEVLSYLGYEN
RALPVHHGFCPDDEFVMEATRETGMVRASAGAAYLVAILTDAKCWSEMFPSIVAGVTARS
DAAIFSGNFGSRIQLMTAELLVQSPRLLNRRINFLRYTKPVAEGQWAVMDVSVDGILGPP
GSRIIAEAAVANNTVVPASYTGWRLLPSGCLVEDMPNGYCKITWVVHAEYDETTVPTMFR
PLFRSGKALGAHRWLASLRGKCEYLAALHSSQVPRNDNTAAAISSMGKRGILKLAQRMMA
VFYSAVSGPVTQPSSNLYEWPESTGTGARSTDADVRMVTWKKAGSVADLVLSASTTVWLP
NTPPQLVFQYLCDGQRRGEWDAFANGAAVTELCSVATGHLHGNAVSVLNSNVTDGIDSKK
VLILQQACTDASCSMVVYAPVEEDSMRAVINSGDHASIFLLPSGFAVLPDGHGRARHAPS
SSSAVVGRDNTAGSLLTVACQALLPGSSPSDNHVTAEAFDDVGKLLCRALKKIKAAVKAN
IVIPA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagaagggcataaggtcaatgattatactaacgaggacactgattacactgat
gatgaagactacaacgacgaggactacactccagagcttgagacggcgtctaaacgtcag
aagcgccacaccccggagcagatccaagaactgagagctgcattccaacggtatgaccac
ccggatcagccgacacgacgggtgctcggcgcaaagattggcctgcaggccagacaggtg
cagtactggttccaaaaccagcgctcccagatgcaggcgaaggctctggtgcagaacagt
aaggtgtttcagcacgagaacgctgtactgatggccgagaacgtgtcactccgtcaggcc
atactaaccaagtcctgcttcacgtgcggcggcacgacggtgcccatcgagctgccggcc
gagaaccggcgcctggtgatggagaacgcgaggctcagagacgagaacatgcgcgccacc
gccctgctgaaccagatcttgctctcggtgcccccggccgagcgcccaccagtcatcacc
agcggccgccccgccgtgctgtccgccagcgagggggccagaagggccgaccgcgccgct
cgtctccgtgcgcacgcggaggctgccatggaccagttcctgctgctggcgaccaagggg
gagccgttgtggttgcccaccccggacggagaggtgctgagctacctggggtacgaaaac
agagcactcccggtgcaccatgggttctgcccggacgacgaattcgtcatggaggccacc
agggagactggcatggtcagagcctctgccggcgctgcctacctcgtcgccatcctcaca
gacgcgaagtgctggtccgagatgttccctagcatcgtggcgggtgtgaccgccaggagt
gatgctgccatcttcagtggcaatttcggctcccgtattcagctaatgaccgcagagctg
ctggtgcagtcgccacgtctgctcaaccgcagaatcaactttctaaggtataccaagcca
gtggcggaggggcagtgggctgtgatggacgtgtccgtcgacggcatccttggaccgcca
ggcagccgcatcatcgctgaagctgccgttgcaaacaacactgttgtgccggcgtcgtac
acgggctggaggctgctgccttccggctgcctcgttgaggacatgcccaatggctactgc
aagatcacatgggttgtccacgctgagtacgacgagaccaccgtgccaacaatgttcagg
ccactgttccgctctgggaaggctctcggcgcacaccgctggctcgcgtcgctccggggg
aagtgcgaatacctcgctgctctgcactccagccaagtcccaagaaacgacaacacagca
gctgccatttcgtcaatggggaagagggggatcttgaagctggcccagaggatgatggcg
gttttctactcggctgtctctggtcccgtcactcagccgtctagcaacctctacgagtgg
cctgaaagtactggcacgggcgccaggagcactgacgcagatgtgcgcatggtgacctgg
aagaaagccggcagcgtggctgacctggtgctgagcgccagcaccacggtgtggctgccg
aacacgccgccgcagcttgtattccagtacctctgcgatggccagcgccgcggcgagtgg
gacgccttcgccaatggcgcggcggtgactgagctctgctctgttgccacgggccatctc
catggcaatgctgtctccgtgctcaactccaatgtgaccgatggaatcgacagcaaaaag
gtgctgatcttgcaacaggcgtgcaccgacgcgtcatgctccatggtggtctacgctcct
gtcgaagaggactccatgcgtgcggtcattaacagtggtgaccacgcctccatcttcctc
ctgccgtctgggttcgccgtcctcccggatggccacggcagggctcggcatgctccgagc
tcctccagcgcggtcgtcggccgcgacaacactgctggttccctcctcactgtggcatgt
caggcactgctgcccggctcatccccatcggataaccatgtcaccgccgaggcctttgac
gacgttggcaagctgctctgtcgtgcactgaagaagatcaaggctgccgtcaaggccaac
atcgtcatcccagcttga
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