Miscanthus floridulus: 136545909
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Entry
136545909 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-splicing factor 38-like
KO
K12849
pre-mRNA-splicing factor 38A
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136545909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136545909
Spliceosome [BR:
mflo03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
136545909
Complex C
U4/U6.U5 tri-SnRNP related factors
136545909
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Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
HIND
Motif
Other DBs
NCBI-GeneID:
136545909
NCBI-ProteinID:
XP_066393974
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All DBs
Position
3:complement(66529759..66532914)
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AA seq
390 aa
AA seq
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MANRTDPLAKSIHGTNPQNLVEKIVRTKIYQSTYWKEQCFGLTAETLVDKAMELDHTGGT
YGGNRKPTPFLCLALKMLQIQPDKDIVVEFIKNEDYKYVRVLGAFYLRLTGTIADVYQYL
EPLYNDYRKIRHKLSDGRFTLTHVDEFIDELLTKDYSCDTALPRIQKRWVLEASGTLEPR
RSALEDDFEEEEEDKEEQPMEIDEPNGRENDNHRGRSPTRERDRDRDRDRKHERHSRDRD
YDRDRDYDRDYGRGRDRDRDRDRERDRNRDRDRDRHRLRDDDYNRDRDRDRERDGRERER
RDRDRGRHRSRSRSRDRRDRDREDGEYRRRRGRGSASPRGRGEDGGSRVEPKRKKEKKEK
KGEGNAPDPNDPEIIEMNKLRASLGLKPLK
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaccgcacggaccccctcgcgaagagcatccacgggacgaacccacaaaacctg
gtggagaagatcgtgcgcaccaagatctaccagagcacctactggaaggagcaatgcttc
ggcctcaccgcggagacgctggtcgacaaggccatggagctcgatcacaccggcggaacc
tacggcggcaaccgcaagcccacccctttcctctgcctcgcgctcaagatgctgcagatc
caaccagacaaggacatcgtagtcgagttcatcaagaacgaggattacaagtatgttcgt
gttctcggggccttctacctgcgcctcactggcaccattgctgacgtctaccagtacctt
gagccgctctacaacgactaccgcaagatcaggcacaagctcagcgatggacggttcaca
cttacccatgttgatgagttcattgatgagttgctgaccaaggattactcctgtgataca
gccctgcctcgcatccagaaaagatgggttcttgaagcgtctggaactctggaaccgaga
agaagtgcacttgaggatgattttgaggaagaagaggaagacaaggaggaacagcctatg
gaaattgatgaacctaacggtcgtgaaaatgataatcatcgtggaaggagccctacaagg
gaacgggatagggaccgggaccgggacaggaaacatgaaaggcattccagggacagagat
tatgatagagatcgggattatgatagggattatgggagagggcgggatagagaccgagat
agagatcgtgaaagagacagaaaccgggatagggatcgagaccgtcaccgcctgcgagat
gatgactacaatcgtgacagggatcgagacagggagagggacggtagggaaagggagcgc
cgagacagagaccgtggcaggcacaggagccgctcaaggagcagagatcgacgggacaga
gaccgggaagatggagagtaccgcaggaggcgtggtcgtggcagtgcgagtcctcgagga
cgtggtgaggacggtggctcaagagtggaaccgaagaggaagaaggaaaagaaagagaag
aagggtgaaggaaatgctccggacccgaatgaccctgagatcatagaaatgaacaagcta
cgagcctcactcggattgaaaccactgaagtag
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