Miscanthus floridulus: 136545926
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Entry
136545926 CDS
T10264
Name
(RefSeq) DNA-directed RNA polymerases II, IV and V subunit 3-like isoform X1
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
mflo Miscanthus floridulus
Pathway
mflo03020
RNA polymerase
mflo03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
136545926
09124 Replication and repair
03420 Nucleotide excision repair
136545926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mflo03021
]
136545926
03400 DNA repair and recombination proteins [BR:
mflo03400
]
136545926
Transcription machinery [BR:
mflo03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
136545926
DNA repair and recombination proteins [BR:
mflo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
136545926
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Motif
Other DBs
NCBI-GeneID:
136545926
NCBI-ProteinID:
XP_066393988
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All DBs
Position
3:68259992..68271792
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AA seq
328 aa
AA seq
DB search
MDRPAGASYQRFPRVRIRDLKDDYAKFELRDTDASMANALRRVMIAEVPTVAIDLVEIEV
NSSVLNDEFIAHRLGLIPLTSAAAMQMRFSRDCDACDGDGSCEYCSVEFHLAARATDSDQ
TLEVTSNDLRSMDPKVCPVDQARAYQQALGGTDPFGANTSNENRGILIVKLRRGQELRLR
AIARKGIGKDHAKWSPAATVTFMYEPDIRINEELMETLTVEERRSLIESSPTKVFKLDSA
NQVVVDNAEAYTYDDEVIKHAEAMGKPGLVEINAKEDSFIFTVETTGAITAYELIMNAIT
VLRQKLDAVRLQDDDGDLGELGAHLGGP
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atggaccgccctgccggcgcatcgtaccagcgcttcccccgcgttcggatccgcgacctc
aaggacgactacgccaagttcgagctccgcgacaccgacgccagcatggccaatgccctc
cgccgcgtcatgatcgccgaggtcccaaccgttgccatcgatctcgtcgagatcgaggtt
aactcctccgtcctcaacgacgagttcatcgcccaccgcctggggctcatcccgctcacc
tccgccgccgccatgcaaatgcgcttctctcgggactgcgacgcttgcgacggcgacggc
tcttgcgagtactgctccgtcgagtttcacctcgccgcgcgcgccaccgactccgaccag
acgctcgaggtcacatccaacgacctgaggtccatggatcccaaggtctgcccagtcgac
caagcacgcgcctaccagcaggcactcggtggcaccgacccctttggagcgaatacctcg
aacgaaaataggggcatacttattgtaaagctgcgtcgggggcaagaactaaggcttcgt
gccattgctaggaaaggaattggcaaggaccatgccaaatggtcaccagctgctaccgtg
actttcatgtatgagcctgacatacgtatcaatgaagaactaatggaaacattgacagtg
gaagagagaagaagcttgattgaaagcagccctacaaaagtatttaagcttgattctgct
aatcaggtagtggtggacaatgctgaggcatacacctatgatgatgaggtaatcaagcac
gctgaggccatgggaaagccaggcttagttgagatcaatgcaaaggaggacagcttcatc
ttcactgtagaaacaaccggcgccatcacagcctatgagctgatcatgaacgcaatcaca
gtcctgaggcagaagctggatgctgtccgccttcaggacgatgatggtgaccttggcgag
ctcggcgcccaccttggggggccttag
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