Miscanthus floridulus: 136546171
Help
Entry
136546171 CDS
T10264
Name
(RefSeq) phytochrome B-like
KO
K12121
phytochrome B
Organism
mflo Miscanthus floridulus
Pathway
mflo04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
136546171
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PHY
PAS
PAS_2
GAF
HisKA
HATPase_c
PAS_4
PAS_9
PAS_8
PAS_3
Motif
Other DBs
NCBI-GeneID:
136546171
NCBI-ProteinID:
XP_066394240
LinkDB
All DBs
Position
1:complement(162786067..162793745)
Genome browser
AA seq
1177 aa
AA seq
DB search
MASGSRATPTRSPSSARPEAPRHAHHHHHHHSQSSGGSMSRAGGGGGGGGGGGGGAAATA
TATESVSKAVAQYTLDARLHAVFEQSGASGRSFDYSQSLRAPPTPSSEQQIAAYLSRIQR
GGHIQPFGCTLAVGDDSSFRLLAFSENVADLLDLSPHHSVPSLDSAAPPPVSLGADVRLL
FSPSSAVLLERAFAAREISLLNPLWIHSRVSSKPFYAILHRIDVGVVIDLEPARSEDPAL
SMAGAVQSQKLAVRAISCLQALPGGDVKLLCDTVVEHVRELTGYDRVMVYWFHEDEHGEV
VAESRRDNLEPYLGLHYPATDIPQASRFLFRQNRVRMIADCHATPVRVIQDPGLSQPLCL
VGSTLRAPHGCHAQYMANMGSIASLVMAVIISSGGDDEQTGRGGISSAMKLWGLVVCHHT
SPRCIPFPLRYACEFLMQAFGLQLNMELQLAHQLSEKHILRTQTLLCDMLLRDSPTGIVT
QSPSIMDLVKCDGAALYYHGKYYPLGVTPTESQIKDIIEWLTVCHGDSTGLSTDSLADAG
YLGAAALWDAVCGMAVAYITPSDYLFWFRSHTAKEIKWGGAKHHPKDKDDGQRMHPRSSF
KAFLEVVKSRSLPWENAEMDAIHSLQLILRDSFRDAAEGTSNSKAIVNGQVQLGELELRG
INELSSVAREMVRLIETATVPIFAVDTDGCINGWNAKIAELTGLSVEEAMGKSLVNDLIF
KESEEIVEKLLSRALRGEEDKNVEIKLKTFGSEQSKGAIFVIVNACSSRDYTQNIVSVCF
VGQDVTGQKVVMDKFINIQGDYKAIVHNPNPLIPPIFASDENTSCSEWNTAMEKLTGWSR
GEVVGKFLIGEVFGNFCRLKGPDALTKLMVVIHNAIGGQDCEKLPFSFFDKNGKYVQALL
TANTRSKMDGKSIGAFCFLQIASAEIQQAFEIQRQQEKKCYARMKELAYICQEIKNPLSG
IRFTNSLLQMTDLNDDQRQFLETCSACEKQMSKIVKDASLQSIEDGSLVLEKSEFSLGDV
MNAVVSQAMLLLRERDLQLIRDIPDEIKDASAYGDQFRIQQVLADFLLSMVRSAPSENGW
VEIQVRPNVKQNSDGTDTELFIFRFACPGEGLPADIVQDMFSNSQWSTQEGVGLSTCRKI
LKLMGGEVQYIRESERSFFLIVLELPQPRPAAGREIS
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcgggcagccgcgccacgcccacgcgctccccctcctccgcgcgacccgaggcg
ccgcgtcacgcccaccaccaccaccaccaccactcgcagtcgtcgggcgggagcatgtcc
cgcgcgggcgggggagggggaggaggaggtggcgggggcgggggcgccgcggccacggcc
acggccacggagtcggtctccaaggccgtggcgcagtacaccctagacgcgcggctccac
gcggtgttcgagcaatcgggcgcgtcgggccgcagcttcgactactcccagtcgctgcgc
gcgccgcccacgccgtcctccgagcagcagatcgccgcctacctctcccgcatccagcgc
ggcggccacatccagcccttcggctgcacgctcgccgtcggcgacgactcctccttccgc
ctcctcgccttctccgagaacgtcgccgacctgctcgacctgtcgccgcaccactccgtt
ccctcgctcgactccgcggcgccgccccctgtttccctgggtgccgacgtgcgcctcctc
ttctccccttcgtccgcggtcctcctggagcgcgccttcgctgcgcgcgagatctcgctg
ctcaacccgctatggatccactccagggtctcctccaagccgttctacgccatcctccac
cgcatcgacgtcggcgtcgtcatcgacctcgagcccgcccgctccgaggaccccgctctc
tccatggccggcgcagtccagtcccagaaacttgctgtccgcgccatctcctgcctccag
gcgctacccggcggggacgtcaagctcctctgcgacacagtcgtggagcatgttcgcgag
ctcacgggttacgaccgtgtcatggtgtactggttccatgaagacgagcacggggaagtt
gtcgccgagagccggcgcgataaccttgagccttacctcggattgcattatcccgccaca
gatatcccccaggcgtcgcgcttcctgttccggcagaaccgcgtgcgaatgattgccgat
tgccatgccaccccggtgagagtcatacaagatcctgggctgtcgcagccgctgtgtttg
gtaggctccacgctacgtgctccgcacgggtgccatgcgcagtacatggcgaacatgggg
tcaattgcgtcgcttgttatggcagtcatcattagcagtggtggtgacgacgagcaaaca
ggtcggggtggcatctcctcggcaatgaagttgtgggggttagtggtgtgccaccataca
tcaccacggtgtatcccttttccattgaggtatgcttgcgagtttctcatgcaggcattt
gggctgcagctcaacatggaattgcagcttgcgcaccagctgtcagagaagcacattttg
cgaactcagacgctattgtgtgacatgctactgcgagattcaccaactggcatcgtcacg
cagagccccagcatcatggaccttgtgaagtgcgatggggctgcactctattatcatggg
aagtactatccattgggtgtcactcccactgagtctcagattaaggatatcatcgagtgg
ttgacggtgtgtcatggggactcaacagggctcagcacagatagcctggctgatgcaggc
taccttggtgctgctgcattatgggatgctgtgtgtggaatggcggtggcttatattaca
ccgagtgattacttgttttggtttcggtcacacacagctaaagagatcaaatggggtggt
gcaaagcatcaccctaaggataaggatgatggtcagaggatgcacccacggtcatcattc
aaggcatttcttgaagtggttaaaagcaggagcctaccatgggagaatgcagaaatggac
gcaatacattccttgcagctcatattgcgtgactccttcagagatgctgcagagggcact
agcaactcaaaagccattgtcaatggacaagttcagcttggggagctagaattgcggggg
ataaatgagcttagctccgtagcaagagagatggttcggttgatagagacagcaacagta
cccatatttgcagtagatactgatggatgtataaatgggtggaatgcaaaaattgccgag
ttgacaggcctctcagttgaggaggcaatgggcaaatctctggtaaatgatcttatcttc
aaggaatctgaggagatagtcgaaaagctactctcgcgagctttaagaggtgaggaagac
aaaaatgtggagataaagctgaagacatttgggtcagagcaatctaagggagcaatattt
gttattgtcaatgcttgttccagtagagattacacacaaaatattgttagtgtctgtttt
gttggacaagacgtcacaggacaaaaggtggtcatggataaatttatcaacatacaaggg
gactacaaagctattgtacacaatcctaatcctctgataccaccaatttttgcatcagat
gagaacacttcttgttcagagtggaacacagccatggaaaaacttacaggatggtcgaga
ggtgaagttgttggtaagtttcttattggagaggtgtttggaaatttttgtcgactcaag
ggcccagatgcattgacaaagctcatggttgtcattcacaatgctataggagggcaggat
tgtgagaagctccctttttcatttttcgacaagaatggaaagtatgtgcaggccttactg
accgccaacacaaggagcaaaatggatggtaaatccattggtgccttttgtttcttgcag
attgcaagcgctgaaatacagcaagcctttgagattcagagacaacaagaaaagaagtgt
tatgcaaggatgaaagaattggcctatatttgccaggagataaagaatcctcttagtggc
atccgatttaccaactctctgttgcaaatgactgatttaaatgatgatcagaggcagttc
cttgaaacttgctctgcttgtgagaaacagatgtccaagattgttaaggacgccagtctc
caaagtattgaggacggctctttggtacttgagaaaagtgagttttctcttggagacgtt
atgaatgctgttgtcagccaagcaatgttattgttgagggagagggatttacaacttatt
cgggatatccctgatgaaatcaaggatgcatcagcatatggtgatcaatttagaattcaa
caagttttggctgacttcttgctaagcatggtgcggtctgctccatctgagaatggctgg
gtagaaatacaagtcagaccaaatgtaaaacagaattctgacggaacagatacagagctt
ttcatcttcaggtttgcctgccctggtgagggcctccccgctgacattgtccaggatatg
ttcagcaattcccaatggtcaacccaagaaggcgtaggactaagcacatgcaggaagatc
ctcaaattgatgggcggcgaagtccaatacatcagggagtcagagcggagtttcttcctc
atcgtcctcgagctgcctcagcctcgtccagcagctggtagagaaatcagctga
DBGET
integrated database retrieval system