Miscanthus floridulus: 136546450
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Entry
136546450 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K14546
U3 small nucleolar RNA-associated protein 5
Organism
mflo Miscanthus floridulus
Pathway
mflo03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
136546450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mflo03009
]
136546450
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
136546450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40
Beta-prop_WDR5
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_EML_2
WD40_WDHD1_1st
WD40_CDC20-Fz
Utp12
Beta-prop_WDR36-Utp21_2nd
WDR55
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR3_2nd
Beta-prop_ACSF4
Beta-prop_WDR36-Utp21_1st
WDR90_beta-prop_4th
ANAPC4_WD40
PQQ_2
Beta-prop_TEP1_2nd
Beta-prop_VPS8
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
WD40_Gbeta
SIP1
Beta-prop_Vps41
Cytochrom_D1
Beta-prop_HPS5
Beta-prop_KIB1-4
Beta-prop_IP5PC_F
NBCH_WD40
Astro_capsid_p
Beta-prop_IFT140_1st
Motif
Other DBs
NCBI-GeneID:
136546450
NCBI-ProteinID:
XP_066394525
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All DBs
Position
1:complement(164804993..164810263)
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AA seq
634 aa
AA seq
DB search
MAPVAAPIRDLLTSFSPSADFLALSSGDGRIKVWDAVRGRLQTEFADIPAVEAGAVAVAE
SKRGHLALDYTCMKWVQLSSKKKRKAGSSLIVLGTGSGDVLALDVAAGDWKWKVSDCHPG
GVTAVAYSKHGRSVYTAGADGMVCRIDASDGAVVGKFKSSSKAISALAVSSDGNVLATAA
GQLRTFDTSSNKKIKKFSGHPVAVRSMVFSNDSQYVLSSGVGERYIAIWKLGSGKTQSSN
CILSMEHPAIFVDCKCSDEGEIHILAISEIGVCYFWSANDVDDLRNKKPTKIVLSESSVS
TVHQAFSIFAAKLQGVDGPNSAHVLLAYGSVVKPSFDKLLVCYGTDINLGISQDGVLLPN
TQTTMTKKGHSVKKQEIVTALDRANAEDAILPLPKLHTQEKKRKHGVTKPSDDVEPEIHS
DLTTTRSIHKRVPVQRIEDDSICIEDMMRECGIIDTRVDESMKGHPGIPSDILSDLFGDG
SIKFNANLPSKKIRGHLRSLKPGDACKLLENLVSAWITRSGSTEVVLRWIYCLLVIHGRF
IPSEESTKVISNLHKMCAERYKATEDLLKLSGRLRLIMAQVDKAASNMSEPTSEEMQDAA
FQSDEEEDEDVDETVFGQDSDSSQNSDDDDDDAK
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccgttgcggctcccatacgcgacctgctcacctccttcagccccagcgcggac
ttcctcgcgctctcttctggggacggccgcatcaaggtatgggacgccgtgcggggccgg
ctgcagaccgagtttgccgacatcccggcagtggaggcgggcgcggtcgcggtcgctgag
tcgaagcgcggccacctcgccctcgattacacctgcatgaagtgggtacagctttccagc
aagaagaagaggaaggctgggagctcactgattgtgcttggtacaggcagtggggatgtg
ctggcacttgatgtcgctgcgggcgattggaagtggaaggtcagcgattgccaccctggg
ggcgtgacggctgtagcatactcaaaacatgggcggagtgtgtacacggcaggcgctgat
ggcatggtctgtaggattgatgcctctgatggggctgttgtcgggaaatttaaatcctct
tcaaaggcaatatctgcattagctgtgtcatcagatggaaatgtgttagcaacagcagct
ggccagttgaggacctttgacacttccagcaacaaaaagattaaaaaattctctggacat
ccagttgctgtgaggagcatggtttttagcaatgatagccagtatgttttgtcatctgga
gttggggaacgctatattgccatttggaagctgggcagtgggaaaacccagagctcaaac
tgtatcctgtcgatggagcacccagcaatatttgtggactgtaaatgttcagacgaagga
gaaatacacattttggcgatttctgagattggtgtctgctatttctggtctgcaaatgat
gtggatgacctgcgtaataagaagccgaccaagattgtattgtctgagtcatctgtgtca
acagttcatcaggcattctcgatatttgccgcaaaacttcaaggagtggatggacctaat
tctgcccatgtcctactggcttatgggtctgtagtgaaaccatcttttgataaacttttg
gtttgttatggtacggatattaatttgggcatttctcaagatggtgttctcttgccaaat
actcaaaccaccatgacaaagaaaggccattctgtaaaaaagcaagaaattgtaactgct
ctagaccgagccaatgctgaagatgctatccttcctcttccaaagctccatacacaggaa
aagaaaaggaaacatggtgtaacaaaacccagtgatgatgtggagcctgagattcatagt
gacctcaccactacaagatctattcataaaagagttcctgtgcaaagaatcgaagatgac
agcatatgcatcgaggatatgatgagggaatgtggcattattgacactagagtagatgag
agcatgaagggccatcctggcattccctctgatattttgtccgatctgtttggtgatggc
agcataaaattcaatgctaatttacccagtaagaagattcgaggtcatctaagatcattg
aaacctggagatgcttgcaaacttcttgagaatttagtatctgcatggataacaagatct
ggtagcacagaagttgtattgcgctggatatactgcctgttagtcattcatggccgtttt
attccctctgaggaatcaacaaaagtaattagcaacctgcacaagatgtgtgcagaaaga
tacaaagctactgaagatttgctgaagctttctggccggcttcggttaataatggctcag
gtcgacaaggctgctagtaacatgtctgagccgacatcagaggagatgcaggatgctgct
ttccagtctgacgaagaggaggatgaagacgttgatgaaacagtgtttggtcaagattca
gattcgtcacaaaacagcgatgatgatgatgatgatgctaagtag
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