Miscanthus floridulus: 136546966
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Entry
136546966 CDS
T10264
Name
(RefSeq) splicing factor-like protein 1
KO
K13095
splicing factor 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
136546966
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mflo03041
]
136546966
Spliceosome [BR:
mflo03041
]
Complex A
Other components
Complex A specific factors
136546966
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
RRM_1
KH_1
KH_12
RRM_5
eIF3g
PHD_4
zf-CCHC
RRM_10
KH_PNO1_2nd
Tuftelin_like
RRM_7
DUF6319
DUF8363
RRM_Nup35
HMA_AllF_N
Salivary_glue
Motif
Other DBs
NCBI-GeneID:
136546966
NCBI-ProteinID:
XP_066395022
LinkDB
All DBs
Position
1:complement(166606012..166609306)
Genome browser
AA seq
725 aa
AA seq
DB search
MASAETLARSPSREPSSDPPRAASSEPHHNGDGSGAGAGDSSRRRRRSRWEQSNDDSAAN
NSGGEGGTGGRKRKTRWAEEEPRPAIALPDFMKDFAAEMDPEVHALNARLLEISRLLQSG
FPLDDRPEGARSPSPEPVYDNLGIRINTREYRARERLNRERQEIISQLIRRNPAFKPPSD
YRPPKLQKKLYIPMKEYPGYNFIGLIIGPRGNTQKRMEKETGAKIVIRGKGSVKEGKLLQ
KRDLKPDPSENEDLHVLVEADTQEALDAAAGMVEKLLTPVDEVLNEHKRQQLRELAALNG
TIRDDEFCRTCGEAGHRQYACPNKMNTFKSDVQCKICGDGGHPTIDCPVKGTSGKKMDDE
YQNFLAELGGGSAPESMNKSGGPMLALTGSGGSGGASAGTGSNPPWSTSGGAAATGLNGI
KKDYDETNLYIGYLPPTMDDAGLVSLFSQFGDIVMAKVIKDRNTGQSKGYGFVKYSDVSQ
ANAAIAAMNGHHLEGRVIAVRVAGKPPQPAPAVSAPPSYPPPPDLTSGGYSSQSYMGAPP
PPPPGSYAPVPWGQPPPYASYPPPPPGSSVYNPAPPAPGQAAPPPYGVQYPPPPPPPPAA
PIPPPGTAPSSDGAQNYPPGVTPPSSGAPTHPVATSVYASSGAPNAPSMYPPPPYSYSPY
YPSPFQPPPPPPPASVDPSQSIATAPWATHSAVPPPPPPLSSTTDQPTASYGADAEYDKF
MSEMK
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atggcttccgccgaaaccctagcccgctccccctcgcgcgagccctcctccgacccgcca
cgcgccgcctcttccgagccacaccacaacggcgatggctccggcgcgggcgccggagac
tcgtcccgccgccgccgccgcagccgctgggagcagtccaacgacgactccgccgccaac
aactccggcggcgagggcgggaccgggggccggaagcgcaagacgcggtgggccgaggag
gagccgcgcccggccatcgcgctcccggacttcatgaaggacttcgccgccgagatggac
cccgaggtgcacgccctcaacgcgcgcctcctcgagatctcgcgcctgctgcagtcgggc
ttcccgctcgacgaccgccccgagggcgcgcgctcgccctcccccgagcccgtctacgac
aacctcggcatccgcatcaacacccgcgaataccgcgccagggagcgcctcaaccgcgag
aggcaggagatcatctcgcagctcatccgccgcaaccccgccttcaagcccccctccgac
taccgcccacccaagctccagaagaagctctacatccccatgaaggagtaccccggctac
aactttatcggcctcatcattggccctcgtggcaacacgcagaagcgcatggagaaggag
actggtgctaagattgtcatcagggggaagggtagtgtcaaggaagggaagctgctgcag
aagagggacctcaagccggatcccagcgagaatgaagacctccacgtgcttgtcgaggca
gacacgcaggaggcactggacgcggctgctggtatggtggagaagctgctcaccccggtg
gatgaggtgctcaatgagcacaagcggcagcagctccgggagcttgctgcgcttaatgga
acaattagggacgacgagttttgtaggacatgtggtgaggctggtcacaggcagtatgct
tgccccaacaagatgaacacgtttaagagtgatgtgcagtgcaagatctgcggggatggt
gggcacccgactattgattgtccggtcaagggcacttctgggaagaagatggatgatgaa
taccagaacttcctggctgagcttggtggtgggagtgcacctgagtccatgaacaaatct
ggtggtccaatgttggctctcacaggaagcggtggtagtggtggtgcttctgctggaact
gggagtaacccgccttggtcaaccagtggtggtgctgctgccactgggctcaatggtatc
aagaaggactatgacgagacaaatctgtatattggctacctgccacctacaatggatgat
gctggactagtcagtctgttttcgcaatttggggatattgtaatggctaaggtgataaag
gatcgaaacactggacagagcaaaggatatggatttgtcaagtattcagatgtgtcacag
gccaatgcagcgattgctgcaatgaatggtcaccatcttgaagggagagttattgcggtt
agagttgcaggaaagccgccacagccggcaccagcagtgtcagcacccccatcttatcct
cctcctcctgatcttacttcaggtggctattcctcccagtcctacatgggggcaccaccg
ccacctcctccagggagttatgctccagttccttgggggcagccaccaccatatgcttca
tatcctccgccaccaccaggctctagcgtctacaatcctgcaccccctgcaccaggtcaa
gctgccccacctccatatggggtgcagtatccaccacccccacccccacccccagcagct
ccgatccctccaccaggcactgctccatcaagtgatggagctcagaactatccccctggt
gtaacaccaccaagttctggcgcacccacccaccctgttgcgacatcagtatatgcatca
tctggcgcaccaaatgcaccatcgatgtaccctccaccaccttatagttattccccatac
tatccatcaccatttcagccaccacctccaccaccgccggctagtgttgatccctctcag
agtattgcaactgcaccttgggcaacccacagtgcagtgccgccaccaccaccacctttg
tcctccacaaccgaccagcctactgcttcctatggtgccgatgcagagtatgacaagttt
atgtcagagatgaagtga
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