Miscanthus floridulus: 136547300
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Entry
136547300 CDS
T10264
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mflo03016
]
136547300
Enzymes [BR:
mflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
136547300
Transfer RNA biogenesis [BR:
mflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
136547300
Prokaryotic type
136547300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
PUS7L_N
R3H_PUS7L
Motif
Other DBs
NCBI-GeneID:
136547300
NCBI-ProteinID:
XP_066395351
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All DBs
Position
3:complement(142115911..142124072)
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AA seq
704 aa
AA seq
DB search
MRGRHLLKPLPLLTLNPPSRPPAAHFRPRAAAHPPTPRRAPLAEPDVGISRFASSIPGFC
GALKQRYSDFVVHEVARDGALVRLTSFDLPDRRTSGDNVENGGCDATADPSRALESFRLL
CGEVDYDALRGFLERVSEGGDGDLSPIILSADSDKAHRSEVHEFIKRNLKFLNTDTVEHS
DGIQKCIRVRLGSGPRGGRGRNRRVMDSSGWRDXKPFDSRGSTSWPYHLGKFLRFHLYKE
NKDTQEALGVIGKMLGVQPRSFGFAGTKDKHAVTTQQVTLLKVHASRLAALNRKLAGIRV
GDFSYVKEGLTLGQLKGNHFAITLRNVIAESANAINAAVNGLSKNGFINYYGLQRFGSGS
VPTHFVGAALLRGEWRHAVSLILGTRVHYKWHGAVDAALRSMPRHLTVERAILQRLKKYP
DNYLQALMAIPKTLRLMYVHSYQSYLWNHAASMRVEKYGISQVVEGDLVYKTGSSLGEAT
TTDTFDDDDSHVNSSEMEMSCETLPEEMIQSVKIVDSEDLLKAVYSIEDVVLPLPGSETL
FPENEVARIYHEIAKKDGISLIESAHGIKDFSITSMKGGYRCVLQRPIDFEWDLMTYKDD
NTPLVPTDLDVLSETPSETNEPLSDGTCSCPSSDSRLQVSLDTSGPTIEASSVETKSIGI
SDLSPEKLAVKLEFTLPASSYATMAIRELTKTSTSVACQKTLNG
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcgcggtcgccacctcctaaaacccctgcccctactcaccctaaaccccccttcccgg
ccgcccgccgcccacttccgcccccgtgctgcagcccatccgcccacgccgcgccgcgcg
ccgctggccgagcccgacgtcggcatctcccgcttcgcctcctccatcccgggcttctgc
ggcgcgctcaagcagcgctactccgacttcgtcgtccacgaggtcgcccgagatggcgcc
ctcgtccgcctcacctccttcgatctccccgaccgacggacgagtggagataatgtggag
aacggcggatgcgacgccaccgcggatccatcgcgggcgctcgagtcgttccggctgctc
tgcggcgaagtggattatgacgcgttgaggggattcctggagagggtttcggagggaggg
gatggtgacttgtcgccaatcattctgtcagctgattcagataaggcccatcgatcggag
gtgcacgagttcatcaagaggaatttgaagttcctgaacacggatacggttgagcacagc
gatggcattcagaaatgtattagggtgcgcttgggttcagggccacgtggtgggagggga
aggaacaggagagtcatggacagttcaggctggagagatngcaagccatttgacagtaga
ggctctacatcctggccttatcacctggggaagttcctgaggtttcacctttacaaggag
aacaaggacacacaagaggcactaggagttataggaaagatgctaggggttcagccaaga
tcttttggatttgcagggacaaaggataaacatgctgttacaacccaacaggtgacactt
ttaaaagtgcatgctagtaggttggctgctcttaatagaaaactcgcaggtatcagagtt
ggagactttagttacgtgaaggagggccttactcttggtcagctcaaagggaaccacttt
gcaattactttgaggaatgttattgcagaatcggccaatgctataaatgccgcagttaat
ggtctaagtaaaaatggatttatcaattactatggcttacagcgctttggcagcggttct
gtacctactcactttgttggtgctgctttgcttagaggagagtggcgacatgctgttagc
ttgattcttggtacaagggtacattataaatggcatggtgctgttgatgcagcacttagg
agcatgccccgacatctcacagtggagagagctattcttcagagattgaagaagtatcct
gacaactatctacaagcactaatggctatacctaaaacactgaggctgatgtatgtacat
agctaccagagctacctatggaaccatgctgcaagtatgagagtggaaaagtatggtatt
tcacaagttgtagaaggtgacttagtttacaaaacagggtcctctcttggagaagcaact
accacagatacgtttgatgatgatgatagccatgttaattcatctgaaatggaaatgtct
tgtgaaacacttcctgaagaaatgatccagtctgtgaagatagttgattctgaagattta
ttgaaggcagtctactcgattgaggatgttgtcctccctttgcctgggtcagaaacattg
tttcctgagaatgaagttgctaggatttatcatgaaatagccaagaaggatggcattagc
ctgatagagagcgcccatggtatcaaggacttctcgattacaagcatgaaaggaggttac
cgctgcgtactccaacgccctattgattttgaatgggacctgatgacttacaaagatgac
aatacacctttagtaccaactgatttagatgttctatcagaaaccccatcagaaacaaat
gagccgttatctgatgggacttgcagttgtccatcaagtgattccaggttgcaagtttca
ttggacacctctggaccaaccattgaagctagctcagtagaaaccaaatcaattggcatc
tcagatctgtcaccagagaaactggctgtgaaattagaatttactctaccagcatcatct
tatgctacaatggccataagggagttgacgaaaacttcaacttcggttgcttgccagaaa
acattaaacggctga
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