Miscanthus floridulus: 136547344
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Entry
136547344 CDS
T10264
Name
(RefSeq) ABC transporter B family member 20-like isoform X1
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
mflo Miscanthus floridulus
Pathway
mflo02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
136547344
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mflo02000
]
136547344
04147 Exosome [BR:
mflo04147
]
136547344
04090 CD molecules [BR:
mflo04090
]
136547344
Enzymes [BR:
mflo01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
136547344
Transporters [BR:
mflo02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
136547344
Exosome [BR:
mflo04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
136547344
CD molecules [BR:
mflo04090
]
Proteins
136547344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_15
Zeta_toxin
AAA_22
AAA_16
AAA_30
DUF87
ABC_ATPase
Motif
Other DBs
NCBI-GeneID:
136547344
NCBI-ProteinID:
XP_066395399
LinkDB
All DBs
Position
1:167532991..167542620
Genome browser
AA seq
1413 aa
AA seq
DB search
MVPTGLFGWASPHVQPLTPVSEVSEPPESPSPYGDGPAGDAGVGAREGEGAGAGEEEVED
DEVEPPPAAVSFWRLFEFADGVDWALMAAGALAAAAHGAALVVYLHYFGRALNFLDSERV
GSSLYGRSDELLRRFKEHALYIVFIAAGVFVAGWIEVSCWILTGERQTAVIRSKYVQVLL
NQDMSFFDTYGNNGDIVSQVLSDVLLIQSAISEKVGNYIHNMATFVGGLIVGLLNCWQIA
LLTLATGPLIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAISYIRTLYAFTNETLAKY
SYATSLQATLRYGILISLVQGIGLGFTYGLAICSCALQLWVGRHLIHRKKADGGEVVVAL
FSVILSGLGLNQAATNFYSFEQGRIAAYRLYEMISRSTSSTNQEGITLPQVQGNIEFRNV
YFSYLSRPEIPILSGFFLTVPARKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGEN
IKNLKVEWLRSQIGLVTQEPALLSLSIRENIAYGRSATFDQIEEAAKTAHAHGFISSLEK
GYETQVGRAGIALTDEQKIKISIARAVLSNPSILLLDEVTGGLDFEAEKAVQEALDVLML
GRSTIIIARRLCLIKNADYIAVMEEGHLVEMGTHDELLNLDGLYAELLRCEEATKLPKRM
PTKNSRERKSLQIEDTSVSQYFQESSSPKMAKSPSLQRTHGMLQFWRSDTNRNSHDSPKD
RSPPSEQTMDNGIPMVAIETERTPSIKRQDSFEMKLPDLPKVDVHPIQRQSSKNSEPDSP
ISPLLTSDPKNERSHSQTFSRPQSEQDDTSSEQSELDEVQHQKPPSFWRLATLSIAEWPY
ALLGTIGAAIFGSFNPLLAYTIALIVSAYYQIEIRDMRHEVNRWCLFIVGMGVITVLVNW
LQHFYFGIMGEKMTERIRRMMFSAMLRNEVGWFDKEENNADTLSMRLANDATFVRAAFSN
RLSIFIQDTAAVSVALLIGMLLGWRVALVALATLPVLVISAIAQKLWLAGFSRGIQEMHR
KASLVLEDAVRNIYTVVAFCAGDKIMELYRLHLGKILKQSLVQGLAIGFGFGLSQFLLFA
CNALLLWYTAISVDQQRLTIATGLKEYILFSFVSFALVEPFGLAPYILKRRKSLTSVFEI
IDREPKIDPDDTTGLKPPNVYGSIEFKNVDFSYPARPDILVLSNFNLKVSVGQTVAVVGV
SGSGKSTVISLIERFYDPVSGQVLLDGRDLKSFNLRWLRSHMGLIQQDPVIFSTTIRENI
IYARHNATEAEMKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVVLKN
APILLLDEASSAIESESSRVVQEALDTLVMGNKTTILIAHRAAMMKHVDNIVVLNGGRIV
EQGTHDSLMDQNGLYVRLMQPHFGKGLRQHRLM
NT seq
4242 nt
NT seq
+upstream
nt +downstream
nt
atggtgccgactgggttgttcgggtgggcgtcgccccatgtacagccgctcacacccgta
tccgaggtctcggagccgccggagtcgccgtcgccgtacggggacgggccggcgggggat
gccggcgtgggggcaagggagggggaaggagctggcgccggagaggaggaggtggaggac
gacgaggtcgagccgccgccggcggcggtgtcgttctggaggcttttcgagttcgccgat
ggggtcgactgggcccttatggctgctggggcgcttgctgctgctgcccatggcgcggcg
ctcgttgtgtaccttcactacttcgggagggccctgaattttctcgactccgagcgggtt
gggtcgtctctctatggccgcagtgatgagctgctccggcggtttaaggagcatgccttg
tatattgtctttattgctgctggtgttttcgttgcaggatggatagaggtatcatgttgg
attctaaccggggaacggcagactgctgtcatcagatcaaaatatgttcaggttttgcta
aatcaagacatgagtttttttgatacatatggtaacaatggagatattgttagtcaagtg
ctcagtgatgtattgctcattcagtcagctataagtgagaaagttgggaactacatacat
aatatggctacatttgttggtggtctcattgttggccttctgaattgttggcaaatagca
cttctaactcttgccactggacccttgattgttgcagcaggaggaatatctaacatattc
cttcataggctggctgaaaacattcaagatgcatatgccgaagcggctagcattgctgaa
caggccatctcatacatcaggacactgtatgcttttacaaatgaaactcttgcaaagtac
tcctatgctacctcacttcaagccacacttagatatggaattctgattagccttgtccaa
gggattggtcttggatttacatatggactcgccatttgctcttgtgctttgcaactttgg
gttggaagacatctgatccatcgcaaaaaagctgatggtggtgaagttgtggtagcttta
ttctctgtaattctgagcggccttggtttgaatcaagcagctacaaacttctattcattt
gagcaagggcgcattgctgcttatagactatatgagatgattagtcgttcaacttccagc
accaatcaagaagggataaccttaccccaggtgcaggggaatattgaatttcgaaatgtg
tactttagctacctgtctcgtcctgaaatcccaatattaagtggtttcttcctcactgta
ccggcgagaaaaactgtggcacttgttggtagaaatggctcggggaaaagcagtataatt
cctctgatggagagattctatgacccaacattaggtgaagttcttttggatggggaaaac
ataaaaaatttgaaagtagaatggttaagaagccaaattggtctggtcacacaagaacca
gccttattgagtttgagcattcgggaaaatattgcttatggaagatctgctacctttgat
cagatagaagaggcagcaaaaacagcccatgcccatgggttcatcagttcacttgaaaag
gggtatgaaacccaggttggtcgagctggtatagcactcactgatgaacagaagatcaaa
atttctattgctcgtgctgtgctttcgaatccatccattctgttgcttgatgaggtcacg
ggaggacttgattttgaagctgaaaaggctgtacaagaagcattagatgttctcatgttg
ggaaggtcaaccattataattgctagacgtctttgcctcattaaaaatgctgattatata
gctgtaatggaggagggtcatcttgttgaaatggggacacatgatgaacttctaaacttg
gatgggctgtacgctgagcttttaaggtgtgaggaagcaacaaaacttcccaaaaggatg
cctaccaagaacagcagggagcgtaagtcgctccaaattgaggacacatcagtgagccaa
tactttcaagaatcgtcctctcctaagatggcaaaatcaccttcactacaaaggacacat
ggcatgcttcaattttggcgatcagatacaaacagaaactctcatgattcaccaaaggat
cgaagtccaccttcagaacaaactatggacaacgggatacctatggttgcaattgaaact
gaaagaacaccgtccattaagagacaggatagttttgaaatgaaattacctgatcttcct
aaagttgatgtccatcctatacagcggcagtcatctaagaattcagaacctgactcaccc
atatctcctcttttgacttctgatcctaagaatgagcgttcacattcacaaacttttagc
agaccacagagtgaacaagatgatacgagttctgaacagagtgaactggatgaggttcag
caccagaaacctccatctttttggcgtcttgcaacacttagtattgctgaatggccttat
gctcttttaggtacaattggtgctgctatatttggctcatttaatccactgcttgcttac
acaatagcacttatagtgtcagcatactatcaaatagaaatccgtgatatgcgccacgaa
gtgaacagatggtgtttattcatagtaggcatgggtgttattacagtgctggtcaactgg
ttgcaacatttctattttggaataatgggggagaagatgactgagcgcataagaaggatg
atgttctcagcaatgctacgcaatgaagttggatggtttgacaaagaggagaacaatgct
gatacactgtccatgcgcctcgcaaatgatgctacatttgtccgtgctgccttcagtaac
cggctttccatatttatacaagacactgctgcagtatctgtggccctccttattggaatg
ttgttgggatggcgggtggcacttgttgcacttgcaactttgccagtgcttgtcatatct
gctattgcacagaaattgtggcttgctggcttctcaagaggaatccaggaaatgcataga
aaggcttcgttagtgcttgaagatgcagtgcggaacatatacactgtagtagcattctgt
gctggggataagataatggaactgtacagactacatcttggcaagatactaaaacaaagt
cttgtgcaaggactggctataggttttggctttggtctctcccagttccttctttttgcc
tgcaatgccctgcttctttggtacactgctatttctgttgaccaacaacgtctgacaata
gccacaggactaaaagagtacattctgttttcatttgtatcattcgcattggtggagcca
tttggacttgcaccttacattcttaaaaggaggaaatctcttacgtcagtatttgaaatt
attgaccgtgagccaaagattgatcctgatgataccaccggcttgaaaccacccaatgtc
tacggaagcattgaattcaagaatgttgatttctcttatcctgctcgcccggacattctt
gtgctgagtaattttaatcttaaagtgagtgttgggcagacagttgcagtggttggggtt
tcaggatctgggaaaagcaccgttatttctttgattgagagattctatgaccctgtttct
ggccaagttctactggatggtcgagatctgaaatcatttaaccttagatggttgcgtagc
cacatgggactgattcagcaagatccagttattttctcaacgaccataagagaaaacatt
atttatgcaaggcacaatgcaacagaggctgagatgaaggaagcggcaaggatagcaaat
gctcatcatttcatcagcagcttgccacatggatatgacactcatgtgggaatgagaggg
gttgatctaacacctgggcaaaagcaacgaattgccattgctagggtggttttgaagaat
gcgcctatattgttgttggatgaggccagctctgcaatcgagtccgaatcaagtagagtg
gtacaagaagctctcgacactctggtcatgggtaacaagacaacaattctcattgcccac
agggcagcaatgatgaagcatgtggataacattgttgtcctaaatggtggtaggatagtt
gagcagggcacacatgactctctgatggaccagaacggtctatatgttagattgatgcaa
ccccattttggcaagggccttcgccagcatcggctaatgtaa
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