Miscanthus floridulus: 136547875
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Entry
136547875 CDS
T10264
Name
(RefSeq) uncharacterized protein
KO
K13171
serine/arginine repetitive matrix protein 1
Organism
mflo Miscanthus floridulus
Pathway
mflo03013
Nucleocytoplasmic transport
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
136547875
03015 mRNA surveillance pathway
136547875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136547875
03041 Spliceosome [BR:
mflo03041
]
136547875
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
136547875
Spliceosome [BR:
mflo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR-related proteins
136547875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PWI
PWI_CCDC43
Motif
Other DBs
NCBI-GeneID:
136547875
NCBI-ProteinID:
XP_066395687
LinkDB
All DBs
Position
1:169839491..169848779
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AA seq
879 aa
AA seq
DB search
MSGGFFRGTSADQDTRFSNKQAKLLKTQKFAPELDHLVDTSKVKMDVMKPWIAKRVTELL
GFEDEVLINFIYGLLEEKEADGKKIQIQLTGFMEKNTVKFMKELWSLLLSAQQNASGVPQ
QFLDEKEAEIQQKKAEDDRIAHEIQKKREKEGRDSELEKNKITDGDAGNSRSYGDPVGSA
LNSTNFNADEEKDNDFKRSLRPKNRGSRRSRSISLSPRGRQRSISPRNNSRSPPRRSRSI
DRHRRSSRRSTSPRRSVSPRRHSPRSTPSISRRRSPYSRRGSPSLSRYPSPFSRRRSPLR
RKSPSSGPRRSLSPRHCRSPARAPRRSPSPTSRRSPVRRRFSPGRRPSPSPVRRRPRSPS
PGRRRPRSPSPGRRRPRSPSPARRRPRSPSPGWRRPRSPSPGRRRPRSPSPGRRRPRSLS
PGRRRPRSPSPGSRKPWPRSPIRRRSPSPKRRRRSPSSPKTRSANRRSSPQGRRSISPNT
IRSPNRSRRSLSRDIEKETNGIPSMKDRDVHPRGQEQKSDDDNDRDGARIGGHHSPDSEH
RLSKSLRSPNYEERNSTRDSSFKNSGKPIPSQGSTDTSGDEEGSRARENARKANSARRKT
KDFSAGLQLKNIGAGDSSPREKSPFSLRQSGKGVQKKHPDQLSESSEDEFVGRRTKRQTD
SPEEPRGKQRSPTRSENDESKDGRNSELVMRGLRDESDDAIDAKKYLSKVNEDSHSEDGS
PLKKTKKITYGNSHIDSGSSGSEETDKHRSHSEKRRHKKAHKHRKQYDGSSESDSEPDGK
EAKRRRKEEKRLRKEERRRRREERHRRRAERHASKQKLKNTDTATVPSDSEKDRDSDSDV
AVRKRGSHAVREESDQKKLEIELREKALESLRAKKAINN
NT seq
2640 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggcggcttcttcagggggacgtccgctgaccaggacacgcgcttctccaacaag
caagccaagctgctcaagacgcagaagttcgcacccgagctcgaccatctggtggatacg
tcaaaggtcaagatggacgtgatgaagccctggattgccaagcgggtcactgagctcctt
gggttcgaggacgaggttctcatcaacttcatctatggcctcctcgaggagaaggaagcg
gatggaaagaagattcagatccagctgacagggttcatggagaagaacacagtgaagttc
atgaaggagctctggagcctcctcctcagtgcacagcagaatgccagtggggtgcctcaa
cagtttctggatgaaaaggaggctgagatacagcagaaaaaggcagaggatgataggatt
gcacatgagatccaaaagaagcgagagaaagagggaagggactcagaactggaaaagaac
aaaattacggatggggatgctggtaactcaagatcctatggtgatccagttggctctgct
ttaaatagtacaaatttcaatgccgatgaagaaaaagacaatgatttcaagcgcagctta
agaccaaagaacaggggaagtcgcagatcgaggagcatatctttgtcgccacgtggtagg
caaagatctatttctcccagaaataattctcgttctcctcctaggcgttcccgctctatt
gatagacaccgtagatcatcacggcgttcaacttcacctagacgttctgtttctccccga
aggcattctccaagaagcacaccttcaatttctagaaggagatcaccttactcaaggaga
gggtcaccttccttgtcaagatatccatccccattttcacgccggaggtctcctcttcgc
agaaaatcaccatcatctgggccacgaaggtcactttctcctcgccattgtcgttcacca
gctcgtgcaccaaggagatcaccatctcctacaagtcgaaggtctcctgttcgacgcaga
ttctcaccaggtagacgtccatctccatccccagtaaggcgcaggccaaggtccccatct
ccaggaaggcgcaggccaaggtccccatctccaggaaggcgcaggccaaggtccccatct
ccagcaaggcgcaggccacggtccccatcaccaggatggcgcaggccacggtccccatcc
ccaggaaggcgcaggccacggtccccatccccaggaaggcgcaggccacggtccctgtcc
ccaggaaggcgcaggccacggtccccatctccaggaagccgcaaaccatggcctcgatct
ccaataagacgtcggtccccatctccaaaacgccggaggagatcgccaagttcaccgaag
actcgttctgcaaatcgtcgttcgtctccacagggaaggaggagtatcagtccgaacact
atcaggagtcctaatcgttctcgcaggagtttaagtagagatatcgagaaagaaacaaat
ggcatcccttccatgaaagacagagatgtgcacccaaggggacaagagcaaaaatcagat
gatgataatgatagggatggtgcaaggattggtggccatcattccccagattctgagcat
agattgtcaaaatccttgaggtctcctaactatgaagaaaggaactccacacgtgatagc
tctttcaagaactcaggcaaacctatacctagtcagggcagcacagatacaagtggagat
gaagaaggcagtcgtgctagagagaatgcccggaaagcaaattcagctcgtaggaaaaca
aaggatttctcggcaggtctgcaacttaagaatatcggtgctggtgactcaagccctaga
gaaaaatctccattcagtttacgacagagtggcaagggtgtccagaagaaacaccctgat
caactgtcagaatcatcagaagacgagtttgtcggtagaagaacaaagcgtcaaactgat
tctcctgaagaacctcgtgggaaacagcgttcccctactagaagtgaaaatgatgagtca
aaggatggtagaaacagtgagcttgtcatgagaggtttgcgtgatgagtctgatgatgct
attgatgcaaagaaatatttatctaaagtcaatgaggactcccactcggaagatggaagt
cctttgaaaaaaactaagaaaataacgtatggtaatagccacattgattccggtagttca
gggtctgaagaaactgacaaacatagatcccactctgagaagcgaaggcacaagaaagct
cataagcataggaaacagtatgatggtagttctgagtctgattctgagcctgatggcaaa
gaggcaaagaggagaaggaaggaagagaagaggctaagaaaagaggaaagacgtcgaaga
cgtgaagagcgacaccgcagaagggcggaacgccatgccagcaaacaaaaattaaagaac
actgatactgctactgtgccttcagactctgagaaggatcgggattctgattcagatgtt
gctgttaggaaaagaggttctcatgctgtcagagaagagtctgatcagaagaaactagaa
attgaacttcgcgagaaggcccttgaatctcttagagcaaagaaagccatcaacaactag
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