Miscanthus floridulus: 136549411
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Entry
136549411 CDS
T10264
Name
(RefSeq) ubiquitin C-terminal hydrolase 12-like isoform X1
KO
K11838
ubiquitin carboxyl-terminal hydrolase 7 [EC:
3.4.19.12
]
Organism
mflo Miscanthus floridulus
Pathway
mflo03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
136549411
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mflo01002
]
136549411
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mflo04121
]
136549411
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
136549411
Peptidases and inhibitors [BR:
mflo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
136549411
Ubiquitin system [BR:
mflo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
136549411
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
USP7_ICP0_bdg
UCH
USP7_C2
MATH_2
MATH
UCH_1
RA_2
Ubiquitin_2
Malt_amylase_C
pP_pnuc_2
SASP
Motif
Other DBs
NCBI-GeneID:
136549411
NCBI-ProteinID:
XP_066396752
LinkDB
All DBs
Position
4:complement(11149543..11163825)
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AA seq
1203 aa
AA seq
DB search
MSSRLSLRSFPDSSRGTCPPHRPAMPRASRPSGAAGTLALGLWGRFTGRSSGVACRARRA
PARAYGILGFGVLMPPPNVGVMDLRLCLVFFSQQQQQQEEEEVLVPHGPQQELPNGAQPM
EVVPAEPAATVENQQIEDPPISRFTWTIENLSRVSTKKLYSEIFVVGGYKWRILIFPRGN
NVEFLSMYLDVADSGVLPYGWTRYAQFSLSVVNQIHNKFTIRKETQHQFSARESDWGFTS
FMPLGELYNPSRGYLVNDTCIVEAEVAVCKVVDYWSYDSKKETGYVGLKNQGATCYMNSL
LQTLYHIPYFRKAVYHMPTTENDMPSGSIPLALQSLFYKLQYNDSSVSTKELTKSFGWDM
HDSFMQHDVQELNRVLSEKLEDKMKGTVVEGTIQQLFEGHHMNYIECINVDFKSTRKESF
YDLQLDVKGCQDVYASFDKYVEVERLEGDNKYHADKHGLQDAKKGVLFIDFPPVLQLQLK
RFEYDFMRDTMVKINDRYEFPLQLDLDRDDGKFLSPDADRNVRNLYTLHSVLVHSGGVHG
GHYYAFIRPTLSDQWFKFDDERVTKEDAKRALEEQYGGEEELPQTNPGLNNTPFKFTKYS
NAYMLVYIRESDKDKIICNVDEKDIAEHLRIRLEKDREEKECRKKEKAEAHLYTIIKVAR
DDDLKTHIGKDIYFDLVDHDKVPSFRIQKQMTFVQFKEEVAKEFGIPTQFQRFWLWAKRQ
NHTYRPNRPLSPQDEAHTVGQLKELVNKAHNAELKLFLEVELGLDLKPLPLPDKTREDIF
LFFKLYEPEKEQLRYVGRLFVKASGRPQDILPKLRMLAGFSQDDDIELYEEIKFEPNVMC
EYIDNRLLFRSCQLEDGDIICFQKSSKPDSADRYRFPDVPSFLTYIRNRQVVHFRSLEKP
KEDDFCLEMSKIFTYDQVVEKVAEKLGVDDPSKIRLTSHNCYSQQPKPQPIKYRGVERLL
DMLIHYNQTSDILYYEVLDIPLPELQALKTLKVTYHHVAKDEVSVHSIRLPKNSTVGDVL
NDIKTKVELSHPNAELRLLEVFYHKIYKVFAPNEKIENINDQYWTLRAEEVPEDEKNLGP
FDRLIHVYHFTKDTQNQTQVQNFGEPFFMVIREDEILSSIKERIQKKLKVPDEDFSKWKF
AYISLGRPDYFEDSDTVAVKFQRNMYGAWEQYLGLEHPDTAPRKAHTINQNRHSFERPVK
IYN
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcccgcctcagcctccgttcatttcccgactcctcccgcgggacctgcccgccg
catcggcccgcgatgccgcgcgcatcccggccgtctggcgcggcgggcacccttgcccta
gggctctggggtcggtttacgggtcggagttctggcgtcgcgtgtagggctcgccgtgcc
cccgcgcgcgcgtacggaattctagggtttggggttttgatgcctccgcctaacgttgga
gtaatggatctgagattgtgcctcgtgtttttctcgcagcaacaacaacagcaggaggaa
gaggaggtgctggtaccgcacggcccgcagcaggagttgcccaatggagcacagccaatg
gaagttgtgcctgctgagccagctgctactgtggaaaaccaacagatagaggatccacca
atctcgagatttacttggaccattgagaatctatcaagagttagcacgaagaagctctac
tccgaaatttttgttgttggaggctacaagtggcgaattttgattttccctaggggaaat
aatgttgaattcttatctatgtatttggatgtagctgattctggagtcttgccctatgga
tggactagatatgcacaattcagcctctccgtggttaatcagattcacaacaagttcaca
ataagaaaagaaacacaacatcagttctctgctcgagaaagtgattggggtttcacttca
tttatgccgttgggtgaactctacaaccccagtagaggttatcttgtaaatgatacttgt
atagtggaagctgaagttgccgtgtgtaaagttgttgattattggagttatgactctaaa
aaggaaactggctatgttggtcttaaaaatcagggtgctacctgctatatgaattctctt
cttcagacgctgtaccacattccatatttcagaaaggctgtttatcacatgcccaccacc
gagaatgatatgccctcgggaagcatcccgttagctctacagtcactcttttataagttg
cagtataatgacagcagtgtctctacaaaggagctcacaaaatcattcgggtgggacatg
catgattcatttatgcaacatgatgtccaagaattgaacagagttctttccgagaagttg
gaagataagatgaagggaactgttgtggagggcacaatacaacaattgtttgaagggcac
cacatgaactatattgagtgtatcaatgtggatttcaaatcaacaagaaaggaatccttc
tatgatctccagcttgatgtcaaaggttgtcaggatgtctacgcttcatttgataagtat
gtagaagtagagcgtctggaaggtgacaacaagtatcatgccgacaagcatggcctgcag
gatgcgaagaaaggagttctttttatcgacttccctcctgttctgcaacttcagctaaaa
cgttttgaatatgatttcatgcgtgacacgatggtgaagataaatgatcgctatgaattc
ccacttcaattggatcttgatagagatgatggaaaatttttatctcctgatgctgacagg
aatgtgcgtaatctttatacccttcacagtgttcttgtccatagcggtggtgttcatggt
ggacattattatgctttcatacgacctaccctttctgatcaatggttcaagtttgatgat
gagcgtgtgacaaaagaagatgcaaagagggcactggaagagcaatatggtggtgaggag
gagctacctcagacaaatcctggcttgaacaacactcccttcaagtttactaaatattca
aatgcatacatgcttgtgtacattcgtgaaagtgacaaggacaaaattatctgtaatgtg
gatgagaaagatatagcagagcatcttcggattagattggaaaaggaccgtgaagagaag
gaatgccggaagaaggaaaaagctgaggcacacctctataccataatcaaggttgcaagg
gatgatgacttaaaaactcatatagggaaagacatatattttgatcttgttgatcatgat
aaagtcccaagcttccgtatccaaaagcagatgacctttgttcagttcaaggaggaggta
gcaaaagagtttggcattcctacacagtttcaacgattttggctgtgggccaagcgacaa
aaccatacttaccgacctaacaggccattgtctcctcaagacgaagcgcatactgttggg
cagctaaaggaactggtgaacaaggcccacaacgctgaactgaaattgttcttggaagtt
gaacttggactggaccttaaacctcttcctcttccagacaagactagagaagatatattt
cttttcttcaaactctatgaacctgaaaaggaacagctgcgttacgttggtaggctcttt
gtaaaggcttcaggaagaccacaggacattctgccgaagttaaggatgctggcaggtttt
tcacaagatgatgatattgaactgtacgaggaaattaagtttgagcccaatgtgatgtgt
gaatacattgataacaggcttctgtttcgatcttgccagcttgaagatggggacataatt
tgttttcaaaaatcttcaaagccagatagtgctgaccgatatcgatttcctgacgtccca
tcctttttgacgtatatacgtaaccgacaggtggtccacttccgttcactggagaagccc
aaggaggacgatttttgcctcgagatgtcaaagattttcacatatgatcaagtcgtggaa
aaagtagctgaaaaacttggcgtggatgacccatcgaaaattcggcttacatcacataat
tgttattcgcagcagcctaagcctcaaccaataaagtacagaggcgttgaacgtctactc
gacatgctgatccattataaccagacttctgatattctgtactatgaagtattggacata
ccacttccagaattacaagcgctgaagacattaaaagttacatatcatcatgtcgcaaaa
gatgaggtgtcagttcacagtataagattgccaaaaaacagcactgttggtgatgtgcta
aatgatattaaaacaaaggttgagttgtctcatcccaatgctgagctaagattacttgag
gtcttttatcacaagatatacaaggtatttgcaccaaatgaaaagattgaaaacattaat
gatcagtactggacactgcgtgcagaggaggttccagaggatgagaaaaaccttggtccc
tttgatcgattgattcatgtatatcattttacaaaagatactcaaaaccaaacgcaagtt
cagaactttggagagcctttctttatggttatccgtgaggatgagatcctatcttctatc
aaagaacgtatacagaaaaagcttaaggttccagatgaagatttctcaaagtggaagttt
gcatacatttcacttggtcgtccagactattttgaagattcagatactgtagccgtaaaa
tttcagagaaacatgtatggagcttgggagcagtatcttggactggaacatccagacaca
gctcctaggaaggcacacacgattaatcagaaccggcattcatttgagagacctgtaaaa
atttataactag
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