Miscanthus floridulus: 136549412
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Entry
136549412 CDS
T10264
Name
(RefSeq) histone deacetylase 15 isoform X1
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mflo01009
]
136549412
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136549412
04131 Membrane trafficking [BR:
mflo04131
]
136549412
03036 Chromosome and associated proteins [BR:
mflo03036
]
136549412
Enzymes [BR:
mflo01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
136549412
Protein phosphatases and associated proteins [BR:
mflo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
136549412
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
136549412
Membrane trafficking [BR:
mflo04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
136549412
Chromosome and associated proteins [BR:
mflo03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
136549412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
136549412
NCBI-ProteinID:
XP_066396754
LinkDB
All DBs
Position
4:complement(11279093..11294247)
Genome browser
AA seq
653 aa
AA seq
DB search
MSPSSVKVCDLSVIGYPLMASDMRAPSSGKKSEISHGVEKCGVSDQACHGKCQSCGTDVK
PFCAGVDGVSSLTGGHTDVKASKENCGACSLNNDRADSLEEEVKGSTARIGHVESADPDG
CVDVKKESFMAVDDLPQEFEGEQAGATLEDLFFFNGEEEDDSDWEPASRLVENRWFCFNC
TMPIVDEITHCMNCHELKGSVVDGYDVFKKQIAQTALLSADTEFLPVSTAIGFDERMLLH
SEQLEVKPNPHPERPDRLRAIAASLAAAGIFPSKCALVPPREITKEELLMVHSPDHIESV
EQTKNMLYSYFTSDTYANGHSACAAKLAAGLCADLASLMVSGRVRNGFALVRPPGHHAGV
KQAMGFCLHNNAAVAALAAKRAGAKKVLIVDWDVHHGNGTQEIFEGDKTVLYISLHRHED
GNFYPGTGAAHEVGVLDGQGFSVNIPWSRGGVGDNDYIFAFQTVVLPIAAEFAADITIIS
AGFDAARGDPLGGCDVTPAGYSWMTSLLADCSNGRLLVILEGGYNLRSISSSATEVVKVL
LGDGPNRASFVGSPSREALKTVSQVLKIQQQFWPVLGPTYASLQAQQGSVSSSHITKHNE
LKKRKHSGGLGPFWWKLGSKRLLYEALFERCRQRKIKGSGEGKATGFSSTLDG
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgtccccttctagtgtgaaggtttgtgatttgagcgtcattggatatcctcttatggca
tctgatatgagagcacctagcagtggcaaaaagagtgagatctcccatggcgtggagaag
tgtggggtttctgatcaagcttgtcatggcaaatgccaaagctgtggcactgatgtaaaa
cctttttgtgctggagtggatggagtctcctcgttgactggtggtcatactgatgtgaag
gcctcaaaagagaactgcggagcatgcagtctgaacaatgatcgtgctgattctttagaa
gaagaggtaaagggttccacagcgaggataggtcatgttgagagtgctgatcctgatggc
tgtgtggatgtaaaaaaggaaagtttcatggctgttgatgatctaccacaggagtttgag
ggggagcaagctggggcaacactggaggatctgtttttctttaatggtgaagaggaagat
gacagtgattgggaacctgctagtcgccttgttgagaatagatggttttgcttcaactgc
acaatgcccattgtggacgagattacacattgcatgaattgccatgagcttaagggatct
gtggtagatggatatgatgttttcaaaaagcaaattgcacagacagctttgttatctgct
gacacagagtttctaccagtgtctacagcgattggttttgatgaaagaatgctgctccac
agtgagcagctagaagttaaaccaaatccgcatccagaaagaccggatcgccttcgcgcc
attgctgcaagtcttgctgctgcagggatctttccctcaaaatgtgctttggtacctcct
cgagaaatcacgaaggaggaactccttatggttcatagtccagaccacattgaaagcgtc
gagcagacgaagaacatgctttacagttactttacttcggatacttatgcaaatggacat
tcagcatgtgctgccaaacttgcagctggattatgtgctgatcttgctagtttgatggta
tctgggcgtgttcgtaatggctttgcactggtaagacctcctgggcatcatgcaggggtg
aagcaagcaatgggtttttgtcttcacaacaatgcagcagtggctgcgttagctgcaaaa
agagcaggtgccaagaaagtcctcatagttgactgggatgtgcaccatggaaatggcaca
caagagatattcgaaggggacaaaacagtcttgtacatatcattacatcgtcatgaggat
ggaaacttttaccctggaactggagcagctcatgaggtgggagttctggatggtcaagga
ttctcagttaatataccttggagccgtggtggtgttggagacaatgactacatctttgct
tttcagactgtggtgcttccaatagctgcagagtttgccgcagacatcactataatatct
gctggattcgatgcagctagaggtgaccctctgggtggttgtgatgttactccagctgga
tactcttggatgacatccctgctagctgattgctcaaatggaagattgttggtgatactt
gagggaggatacaatctccggtcgatatcctcatcagctactgaagttgttaaggtccta
cttggggatggtccaaatcgtgcttcatttgtaggttcaccatcaagagaggccttgaag
actgtttctcaagtcctgaagattcaacaacaattttggccagttttaggtccaacatat
gcatcactacaggcacagcaggggtcggtttcttccagtcatatcaccaaacataatgag
ctgaagaaaaggaagcattcaggaggattagggcccttctggtggaagttgggaagcaaa
aggcttctgtacgaagcgctttttgagcgctgtcgtcagaggaaaatcaaggggtccgga
gaaggaaaagcaactggtttcagcagcaccttagatgggtag
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