KEGG   Miscanthus floridulus: 136549449
Entry
136549449         CDS       T10264                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
mflo  Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:mflo00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:mflo03036]
    136549449
   03400 DNA repair and recombination proteins [BR:mflo03400]
    136549449
Chromosome and associated proteins [BR:mflo03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    136549449
DNA repair and recombination proteins [BR:mflo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     136549449
SSDB
Motif
Pfam: MMS19_N MMS19_C
Other DBs
NCBI-GeneID: 136549449
NCBI-ProteinID: XP_066396820
LinkDB
Position
4:13308489..13319918
AA seq 1141 aa
MVRVPPGEWVPHVEAYVDVARPAAQHSASVDALAALVNKDNLTLFDLVSKMDMYLTTTDH
IVRSRGILLLGEILSRISFKCLDVNTITTLSDFFISRLSDWQAIRGALVGCLALLHRKQG
VGCIVIADVKRLVESFLQNVPVQSLATADRKLCFEILSCILDRYPEAVKQMDGEQLYGIC
EAIDEEKDPECLMLSFHVVEVVMKLFPDPSGLSAQFAGDVFEILSKYFPVYFTHGVGNGL
DASREDLSRALMHAFCSTQYFEPFVIPLLLDKLSSSLPLAKIDSLKYLDNCIRFYGADRM
VRHASAVWYKLKEVIFDLSSDQLLISEALNCLKSAIMYTDSSDKDLFINLILLDEDIVNK
IRSVSSVDKSILSSLEDLAQLHALGSVISILAESSTYFCTRVLQEHFVHLVDIVGTKADY
ESRQLNDCNGSSSAPVNYGALYLSVQLLSSCREVALVSYKDCSSVKLAKESWWLILEKKL
EQLIHLLRSFSLSMQPMFRQEYVSCAVKGLLTLATFPEQCLPLPANAYEDILVMFTSIII
NKFENVDLWRLSLKALTSIGSSIAEFPASEREVVYYRTVVDKIVPLVESYDTSMPLSLRL
EASYEVGTAGLNYMLRVAKSLEVAVVTNISESEANGRTECAEHMAHLFECYSSRVLPWLL
TSGGVNELALSFALRLLDETKDFTVLDRISSQGLLDSLMTGMKLLVGVCTVEQQSLIVQK
AYSIISSMLLLPMKLMTGRLLAVDELVPSHSVPETALISMFSSIIVGLRPQTPVPDMMVM
INLFTVFLLNGKMPAAYALASIFNKYLHSPEFSHENQLDKILDDILERCFSTVLANSSSE
ISHSSAGTSDDVDSSDVFSGNKLSKINILSSLAWIGKGLLMRGDEKVKDISMFLLKILCS
DEILASIPPHQEEPYGGDSSDTSLAISAASAFHVMMSDSEMCLNKKFHARIKPLYKQRFF
SILMPIFLSKIKETTAVTTKLALYRAFGHIISNAPVPAVITEAHQILLMMVDSLAKLSLD
IEDKDLVYSLLLVFSGMLMDEKGKECILDNIQITISVLTKLVSYPHMMVVRETALQCLVA
FSTLPHSKIYPMRRKIDRSFRLYKQQSRLSMIRKGLFVKLLFDVGKHGNPLLKGVSFSGL
T
NT seq 3426 nt   +upstreamnt  +downstreamnt
atggtgagggtccctcccggcgagtgggtcccccacgtcgaggcctacgtcgacgtcgcc
cgccccgccgcgcaacactctgctagtgtggatgcgcttgctgccctggtgaacaaggac
aacttgactctcttcgatttggtatccaagatggatatgtatctgacgacaacagaccac
attgtcagatcaagaggaatactgcttctgggggaaatattgtctcgaatttcatttaaa
tgtttagatgtcaataccattacaacgttgtcagacttctttatatcaagattgtcagat
tggcaagcaatacgaggagcccttgttggttgcctggctctattgcacaggaaacaaggt
gttggttgtatcgtgattgctgatgtcaaaagactagttgagtcttttttacagaatgtt
ccagtgcaatcacttgcaactgctgaccgcaagctgtgctttgaaattctgagctgcata
ctggatcggtacccggaagctgtaaaacaaatggatggcgaacagctgtatgggatctgt
gaagcaattgatgaagaaaaggatccagagtgcttgatgctttcttttcatgtagtggaa
gttgtcatgaagctgtttccagatccatctggtttgtcagcacagtttgcaggggatgtt
tttgagattctgagcaagtattttcctgtctacttcacacacggagtgggtaatggtttg
gatgcttcacgggaagacctctctagagcattgatgcatgctttttgttcaacccaatat
tttgagccttttgtcatccctttgcttcttgataagctttcttcttctcttccattggca
aagattgattctttaaaatatttggacaattgcattcgcttctatggagctgatagaatg
gttagacatgcatcagctgtttggtacaagttgaaagaagtgatttttgacctttcttca
gatcaattgttaatatcagaggctctgaattgtttgaagtctgctattatgtatactgat
tcttcagataaagatctttttattaatttgatcttgttggatgaggatattgtgaacaag
attcgctctgtatcaagtgtggataagtccatattgagttcattagaggacctggcccaa
ctgcatgcacttggaagtgttatttctattcttgctgaatcatctacatatttctgtact
agagttcttcaagagcactttgtacacttggtagatattgtcggaaccaaagctgactat
gaatctcggcagttgaatgattgtaatggatcatcttctgctcccgtcaactatggagca
ctctatttatctgttcaattgctttcatcctgtagagaagtggctttggtatcttataaa
gactgttcttctgttaaattagcaaaggaatcctggtggcttatcttagagaaaaagctg
gagcagttaattcatctccttcgatccttttctctatctatgcagccaatgttcagacaa
gaatatgtctcttgtgctgtgaagggcttgctaacactagcaacattcccggaacaatgc
ttgcctctgccagcaaatgcttatgaggatattctggttatgtttacgtcaattattata
aacaagtttgaaaatgtagatctgtggagattgtcattgaaagcattgaccagcattggt
tcatctattgctgagttccctgcttctgaaagggaagtggtttactacagaacggttgtt
gacaagattgttcctttggttgaatcttatgatacttcaatgcctctcagtctaagactc
gaagcaagttatgaagttggaactgctgggttgaactatatgttaagagttgcgaaatca
cttgaagtcgctgttgtcaccaatatttctgaatctgaggctaatggaagaacggaatgt
gctgaacatatggcccatttatttgagtgctactctagccgggtccttccttggttatta
acttctggtggtgtcaatgaacttgcattgagcttcgctctgcgtctattggatgagacc
aaggatttcactgtgttagatagaatcagctcacagggcctccttgactcactaatgact
gggatgaagcttttagttggagtatgtacagtggagcaacaatcacttatcgttcagaaa
gcatatagcataatatcttcaatgctcttactcccaatgaaattgatgacaggccgtctt
ttggctgtagatgagttagttccttcacattctgttccggaaaccgctctcatcagcatg
ttttcgtcgattatagtaggccttcggcctcaaacacctgtaccagatatgatggtgatg
attaacctctttactgtctttctactaaatgggaaaatgccagctgcttatgcattagct
tctattttcaataaatatctacacagtccagagttttcacacgagaatcagctggataaa
atacttgatgatattcttgagaggtgtttctcaactgtattagccaacagctcctcagag
atatcccactcttctgctggcacttcagatgatgttgattcctcagatgtcttctctgga
aacaagctttctaagattaatatcttgtctagcttggcttggattggcaaaggattactt
atgagaggagatgagaaggtgaaggacatttcaatgtttcttcttaagattctatgctca
gatgagattttggctagtattccaccccaccaggaagaaccttatggcggtgattcatca
gatacttctcttgcaatatctgcagctagcgcattccatgtgatgatgagtgattcagaa
atgtgtctaaataaaaaatttcatgcaagaataaaaccattatacaagcagcgtttcttc
tcaatactgatgccgatcttcctctctaaaattaaagaaacaactgcagtcacgacaaaa
ttggcactataccgagcttttgggcatatcatttccaatgctccagtaccagcagttata
acagaagcacaccagattttactcatgatggttgatagcttagctaaattaagtttggac
attgaggataaggatctggtgtacagtttgttacttgtcttctctggaatgttgatggat
gaaaagggcaaagaatgcattctggacaatatccaaatcacaatcagtgttcttaccaaa
cttgtttcctatcctcacatgatggttgtgcgggagacagcattacaatgtttagtagcc
ttttctacgttacctcactcaaaaatttatcctatgcggcgtaagattgatcgttcattc
aggttgtacaagcagcaatcaaggctctcgatgataagaaaagggctgttcgtcaagttg
ctgttcgatgtcggcaaacatggcaatcctttgcttaagggagtctctttcagtggtctc
acgtag

DBGET integrated database retrieval system