Miscanthus floridulus: 136549503
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Entry
136549503 CDS
T10264
Name
(RefSeq) heterogeneous nuclear ribonucleoprotein 1-like isoform X1
KO
K14411
RNA-binding protein Musashi
Organism
mflo Miscanthus floridulus
Pathway
mflo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
136549503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mflo03019
]
136549503
Messenger RNA biogenesis [BR:
mflo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
136549503
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_7
RRM_PARP14_3
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
136549503
NCBI-ProteinID:
XP_066396904
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All DBs
Position
4:complement(19719012..19725493)
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AA seq
483 aa
AA seq
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MEAADYSGKLFVGGISWETDEARLREYFVRFGEVTEAVIMRDRSTGRARGFGFVVFADAT
VAERVILDKHMIDGRMVEAKKAVPRDDHSIVSKSNTSSIGSPGPGRTRKIFVGGLPSNVT
EADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHELNGKMVEV
KRAVPKEQSPGPVARSPAGVGQNYAMNRVHSFLNGFNQGYSPNPIGGYGMRVDGRFGLLS
GARNGFSSFGPGYGMGMNVEGGMSGTFGANSGFISNSNGRQMGSYFNGSSNRLSSPIGYL
GLNYDSGSMLSSMSRNVWGNGSLNYTSNPTNMSAFAPPGNGGQVSITGDNWGGLPSAHGL
GNISSLGSGNLGRGAGDNNFGLPSGSYGRSNSTGTIGEPFSASGNAYEVNNPDTYGSSSI
YGGTSWRFASSEVDMPSFSHDLGNVDPNIKSDMSASYMGNYPVNNNQPSRGQLLFQHFSL
NYT
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgccgactattccgggaagctcttcgtcggcggcatctcgtgggagacggac
gaggcccgcctccgcgagtacttcgtccgcttcggggaggttactgaggccgtcatcatg
cgggaccgcagcacgggccgcgcccgtgggttcgggttcgtggtcttcgccgacgccacg
gtcgccgagcgcgtcatcttggacaaacacatgatcgacggccgtatggtggaggccaag
aaggctgttcccagggatgaccacagtatcgtgagcaagagcaacacaagcagcataggg
tcacctggaccgggccgtaccagaaagatctttgttggaggtctgccctcaaatgtaaca
gaggctgacttcagaaggtattttgagcagttcggtgtcataactgatgtggttgtgatg
tacgaccacaacacgcagagaccgaggggctttggattcatcacctacgattcagaagac
gccgtcgacaaagccctgcacaagagcttccacgagctgaatggtaaaatggtagaggtc
aagagggctgttccaaaggagcagtctcctggacctgttgcgcgctcgcctgcgggagtg
gggcagaactatgctatgaacagggttcatagcttcctgaatggcttcaaccagggttac
agcccgaatcctataggaggttacggcatgagggtggatggaaggtttggcctgctttca
ggtgcacggaatgggttctcttcttttggcccaggttatgggatgggtatgaatgttgaa
ggtgggatgagcggaacttttggtgcaaactctggtttcatcagtaactccaatgggagg
caaatgggttcctacttcaatggaagttcgaacagattgagtagtcctattggttacctt
ggtcttaattatgactcaggatcaatgttgagttccatgtctaggaatgtttggggcaat
ggaagtctaaactacacgagcaatcctacaaacatgagtgcttttgctccccctggaaat
gggggtcaagtcagtattaccggcgacaattggggaggtctcccttctgctcatgggttg
ggcaacatttcaagccttgggtcagggaaccttggccgtggagctggagataataacttt
ggtttgccttctggctcctatgggcggagcaactcaactgggacaattggtgagcctttt
tctgcatcaggcaatgcgtatgaagtgaacaacccagatacatatgggagcagctctatt
tatggtggcacatcctggaggttcgcttcatctgaagttgacatgccttctttcagtcac
gatcttggaaatgttgatccaaatatcaaatcagacatgtcagcaagttacatgggcaat
tatcctgttaacaacaatcagccaagcagaggtcagttgctgtttcaacatttttctctg
aactacacatag
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