Miscanthus floridulus: 136549517
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Entry
136549517 CDS
T10264
Name
(RefSeq) rRNA biogenesis protein RRP5-like isoform X1
KO
K14792
rRNA biogenesis protein RRP5
Organism
mflo Miscanthus floridulus
Brite
Ribosome biogenesis [BR:
mflo03009
]
Eukaryotic type
90S particles
Other 90S particles
136549517
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GFIT
Other DBs
NCBI-GeneID:
136549517
NCBI-ProteinID:
XP_066396917
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Position
4:21055945..21074963
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AA seq
1913 aa
AA seq
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MAPPRGDRKMGKGAGGKTDLRPDRKQFKRHSKEDAAAEQGDGEGEQQQSAAPGSAALLAA
ASDEADFPRGGRSLLSKDEMAEARAEAEQDFEREGKKGKGKRKRRGGDSSGFGADDDLGT
LFGGATTGKLPRFANRITVKNISPNMKLWGVVIEVNQKDIVLSLPGGIRGFVRSEDVCDI
ALQENRKDSENSLCAEVVHVGQLVPCIVLRVDDDKKEGKVNRRVWLSLRLSLLYRGLSLD
GLQEGMVLTAQVKSTEDHGYILHFGVSSFSGFMQKDDKENVKIERRQLMQCVVKAIDKTR
AIVHLSSDKDLLSKSIIKDLKGLSIDHLIPGMMVNARVHSVLENGVMLSFLTYFSGTVDI
FNLLNSFPSGNWKDDYSKNKKVNARILFVDPSTRAVGLTLNKHLLHLEVPPINLKAGDIY
DKSKVLRVDKKAGLFLEIPSPTPSPGFISIHDVSDKDAKNLEKFKEGSSLRVRILGVRNL
EGVAIGTVKDSAFEGSVFTHDDVKPGMLVRAKVATVEPFGAIVQFSSGVKALCPLPHMSE
LEHIVKPSKKFKVGAELLFRVLGCKSKRVTVTYKKSLVKSKLDVLASYADAKIGLVTHGW
ITKIEKHGCFVKFYNGVQGFVSRSDLGLEAGTEAENVYHVGQVVKCRIINVIPASRKLNV
SFVISHNRVIPIDTPKLGSIVSGVVERLTPAAIVVSVNGISKGTILNEHLADHHGQASQL
KNLLKPGHEFNQLLVLDIEGQNLVLSAKHSLINCANDIPSEISQMHPGVVVHGYICNIIE
AGCFVRFLGHLTGFSPKDKAVDRRIERLSDAFYVGQSVRSHILSINAETARVKLALQQSM
CSSTDSSFIQGYFLLDQKIAALKYSSNDWAHTFGIGSLVEGEVGAIEEYGIILNFKDHPD
VVGLIEHHQLGGSSVEVGSSVKGLVFDLSDGVVNLSLKPELIGSVRNVGKKKKRQRAAVA
DLELHEEVNAVVEIIKESYVVLSIPEYNYAIGFAPLMDYNSQLLPHHHYDNGQRITVVVG
NIPSSDSSGRLILLPKASAQYSALSESKRAKKKSGYKIGSLVEAEIIDIKPLELLLQFGG
NLHGRIHITEVLEEDSDEHPFSKLRIGQKLNARIVAEAEPSGKSGKNFKWELSIRPCIVK
GEFEELTAQKEQKHTTNEIVRAYVVKVDKEWVWLTVSRNVMAHLFVLDSSSEPSELKEFQ
QRFSVGQAVKGRVINVNREKRLLRLKALDNQCTQPNIDEIQQSKFSVFEQTKQGDIIGGR
VQKILPGVGGLVVQIGPHLHGRVHYTEIVDSWVAEPLSGFHEGQFVKCKVLSVSRSSEGS
LRVDLSLRSSNLIRDSNNSGLVDDLATCTSRIEKIKDLLPGTEIKGYVKNVNSKGCFIML
SRMVEARITLSNLSDEYVENPQKDFPVGMLVHGRVLSTDPSSGRVEASLRKTTGSKLEKL
DDISYSDLHVGDIIDGQVKRVESFGLFVTIRRSELVGLCHVSELSDEPVVDINSCYKAGD
MVKAKILKIDEKRHRVSLGTKKSYFDSGLTADTNDDEDDESALMDISVAPQMVEYHNRSL
VHRKAEPMASVLPLQVCLDESEGSDLEDNNNNNNKGLEIANGTEANAKKNDKQLKKEARK
QRELEISAMEERALQGDVPQTPDDFEKLVRSSPNSSFVWIKYMATLLDLADVEKARAVAE
RALKTIIPREEEEKLNVWVAYFNLENEYGSPREDAVKKVFQRALQYCDPKKLHLALLAMY
ERTEQYELADELLDRMTKRFKTSCKIWLCRIQFALKQGKDVEYIKSIVNRVLLSLPHRKR
IKFLSQTAILEFKCGVPEEGRSRFELILREYPKRTDLWSVYLDQEIRLGDREVIRALFER
VTCLTLPPKKMQFLFKKYLNFEKSLGQDNERIQLVQQKAIEYVQSSLPSQDNS
NT seq
5742 nt
NT seq
+upstream
nt +downstream
nt
atggcgccgccgcgcggcgacaggaagatgggaaagggcgccggtggcaagaccgacctg
cgccccgaccggaagcagttcaaaaggcacagcaaggaggatgcagctgctgagcagggg
gatggcgaaggagagcagcagcagtcggcagcgccgggttctgctgcgctcctcgccgca
gcttctgacgaagctgacttcccgagagggggacgcagcctcctgagcaaggatgagatg
gcggaggctcgtgcggaggcggagcaggatttcgagagggaggggaagaaggggaagggg
aaaaggaagaggaggggcggcgactcgtctggttttggcgcggatgacgacttggggaca
ctcttcggcggggccaccactgggaagctcccacgctttgctaatcgcatcacagtaaag
aatatttcaccaaatatgaagctctggggtgttgtaattgaggttaaccagaaagatatc
gtgttaagtctacctggtggaattagagggtttgttcgctcagaggatgtgtgcgacatt
gctttgcaggaaaatcgtaaggatagtgagaacagtttatgtgcagaagttgttcatgtt
ggtcagcttgttccttgtatagtcctacgagttgacgatgataagaaagaaggaaaagta
aacagacgggtttggctatcattgcgattaagcctactgtacaggggactttccctggat
ggcttgcaggaaggaatggtacttactgcccaagtcaaaagcactgaggaccatggttac
attcttcattttggagtatcctcctttagcggatttatgcaaaaggatgacaaagaaaat
gtgaagattgagcgccgacaactgatgcaatgtgttgtgaaggcgattgacaaaactcgg
gctattgttcacttgagttctgataaagacttgctttctaaatctattattaaggatctg
aaaggcctttctattgatcatttgattcctgggatgatggttaatgcacgcgtccattca
gttcttgaaaatggagtcatgttatcatttcttacttatttcagtggaacagttgatatt
tttaatttgttgaattcctttccctctggtaattggaaagatgattacagtaagaataag
aaggtaaatgctcgcatcctgttcgttgatccatcaacaagagcagttgggcttacattg
aacaaacatttacttcatcttgaagtaccccctattaatctaaaagctggagatatctac
gataaatcaaaggtgctgagggtagataaaaaggctggcctttttcttgaaataccttct
ccaactccatcacctggatttattagtatacatgatgtgtcagacaaggatgcaaaaaac
ttggagaagtttaaggaaggcagtagcttacgtgtccgtatacttggagtgcggaatctt
gaaggagttgcaataggcaccgtaaaagacagtgcttttgaagggtctgttttcactcat
gatgatgttaaacctggaatgttagtgagagctaaggttgctactgttgagccattcggt
gctattgtacagttttcaagtggtgtgaaagcactttgcccgcttcctcacatgtcagag
ttggaacatattgtgaaaccatcaaagaaatttaaggttggagctgagcttcttttccgt
gtattgggctgcaaatccaagagagttacagtgacatacaagaagtctctggtgaaatca
aaacttgatgtgctggcatcatatgctgatgcaaaaattggtttagtgactcatggatgg
attactaaaattgaaaagcacggttgctttgtaaaattctacaatggagttcagggtttt
gttagcagatctgaccttggattagaggctggaactgaagcagaaaatgtttatcatgtt
ggtcaagtggtcaaatgtagaattatcaatgtgatccctgcttcaagaaaactaaatgtt
agttttgtcatatcccataatagggttattccaatagacactccaaagttgggtagtatt
gtctctggtgttgtggaacggcttactcctgcagctattgttgtcagtgtaaatggcatc
tccaaggggacaatactaaatgaacatttggcagaccatcatggtcaagcttctcagttg
aagaatttgctgaagcctgggcacgagttcaaccaacttctagttctcgatattgaaggt
caaaatttagttctttcggcaaagcactcacttatcaattgcgcaaatgacattccttca
gagatatcgcagatgcatcctggagttgtagttcatggttacatctgcaacattatcgaa
gctggttgttttgtccgttttctcggacatttgactggtttctctcccaaggacaaagca
gttgataggcggatagaaaggctttctgatgcattctatgttggccagtcagttcggagt
catatactcagcataaatgcagaaactgctagagtaaaactcgcacttcaacagtcaatg
tgctcctcaacagattcttcatttattcaaggatactttcttctggatcagaagattgca
gcattgaagtactcaagcaatgattgggctcacacttttggcattggtagcttagttgag
ggggaggtgggagcaatagaagaatatggcattatccttaacttcaaagaccatccggat
gttgttggcttaatcgagcaccatcaacttggtggcagtagtgtggaagtgggatcttct
gtgaagggtcttgttttcgatttatctgatggagttgttaacttgtcccttaaaccagag
ctaattggcagtgttagaaatgttggaaaaaagaagaaacgccaaagggctgcagttgca
gacttggagcttcatgaggaagtgaatgcagttgtggaaataatcaaagagagctatgtg
gtcctttccatccctgagtacaattacgcaattggttttgcaccactgatggattacaac
tcacaactgcttccccaccaccactatgataatggacaacgcattactgtggttgttgga
aatatcccaagttctgattcttctggaagacttatcctactaccaaaagcttcggctcag
tattctgccctctctgaatctaaaagggctaagaagaaatctggctacaaaattgggtca
cttgttgaagcagagattattgatatcaagccgcttgaacttctactgcaatttggtggc
aatcttcatggaagaatccatattactgaggttcttgaagaggattctgatgagcatccc
tttagtaaactcagaatagggcaaaagcttaatgccagaattgttgcagaggctgaacct
tctggaaagagtggcaaaaacttcaaatgggaattgtctattaggccatgtatagtcaag
ggagagtttgaagaattaactgctcaaaaagaacaaaagcacaccacaaatgagattgta
cgtgcttatgtcgtcaaggtggataaggaatgggtctggttaactgtatcaagaaatgtt
atggctcatttatttgtacttgatagttcttctgagcccagcgaactgaaagaattccag
cagcgctttagtgtaggccaagcagtgaagggccgtgttatcaatgtgaaccgggagaaa
aggttacttcggttgaaggcacttgataaccaatgcacacagccgaatatagatgaaata
caacaatcaaagttctctgtgtttgaacaaacaaaacaaggagatatcatcggtggacgt
gttcaaaaaattctacctggtgttggtgggcttgtcgttcagattggacctcatctccat
gggagggttcattatactgaaattgttgactcatgggtggccgaacccttgtctggattc
catgagggccagtttgtgaagtgcaaggtcctgtctgtgagccgctcatcagaaggatca
cttcgagttgatctttcactccgttcatcaaatctgatcagagactctaacaactcagga
ctagttgatgatctggcaacctgtacctcccggatcgaaaagatcaaggatctgcttccc
ggaactgagattaagggctatgtgaagaatgttaattccaaaggatgttttattatgctt
tctcgaatggttgaggctaggattactctatcaaatttgtcagatgagtatgttgaaaat
ccgcagaaggatttccctgttggaatgcttgtacatggaagggtcctgtctacggaccca
tcatcagggagagttgaggcatcacttaggaagaccactggttccaaattggaaaagctg
gatgatattagttatagtgatttgcatgttggggatatcattgatggccaagttaagcgg
gttgaatcctttggattattcgttacaattcggagaagtgaactggttggtctgtgccat
gtatcagaactttctgatgaacctgtcgttgatattaactcttgctataaagctggtgat
atggttaaagccaaaattctgaagatcgatgagaagcggcatcgagtatcacttggaacg
aagaagtcgtactttgattctggtctgactgctgacacaaatgatgatgaagatgatgaa
agtgctcttatggacatcagtgttgcccctcagatggttgaatatcataacagaagttta
gttcatcgcaaagcagaaccaatggcttctgtgctgcctcttcaggtttgcttggatgaa
tctgaaggttctgacctagaggataataataataataataataaaggtcttgaaattgca
aatggaactgaagcaaatgctaaaaagaatgataaacaattaaagaaggaagcaagaaaa
caaagggaactagaaatcagtgctatggaggaaagggctttgcagggagatgtaccacaa
actccagatgattttgagaagttggtcaggagctccccaaatagtagttttgtctggata
aaatatatggccactttgttagatcttgcagatgttgagaaagcacgtgcagtagctgag
agggctttaaaaacaataatccccagagaagaagaggagaaacttaatgtttgggtagca
tatttcaatctggaaaatgaatacggtagtccacgggaggatgctgtgaaaaaggtattc
caaagagccttgcaatattgtgatcccaaaaagttgcacttggctcttcttgcgatgtac
gagaggaccgaacagtatgaacttgcagatgaacttctagacagaatgaccaaaaggttc
aaaacttcctgcaagatatggttatgccgcattcagttcgccctcaagcaaggcaaggat
gttgagtacatcaaatccattgtaaaccgtgtgcttctaagtttgccacataggaagcgc
ataaagttcctctcgcagacagctattctagaattcaaatgtggggtgcctgaagaagga
agatccagatttgaactaatattgcgggagtacccaaaaagaacagacctttggagtgtt
tatcttgaccaagaaatccgccttggtgacagagaagttatacgggcattgtttgagagg
gtgacttgtcttaccctacctccaaaaaagatgcagttcttgttcaagaagtaccttaat
ttcgagaagtcactgggtcaagacaacgaaagaattcagcttgtgcagcagaaggcaatt
gaatatgttcagagttcactgccgtcacaagacaactcttga
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