Miscanthus floridulus: 136549620
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Entry
136549620 CDS
T10264
Name
(RefSeq) protein REDUCED CHLOROPLAST COVERAGE 1-like
KO
K03255
protein TIF31
Organism
mflo Miscanthus floridulus
Brite
KEGG Orthology (KO) [BR:
mflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
mflo03012
]
136549620
Translation factors [BR:
mflo03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
136549620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_10
TPR_12
eIF3_p135
TPR_NPHP3
CLU_N
TPR_2
TPR_MalT
TPR_9
TPR_8
Motif
Other DBs
NCBI-GeneID:
136549620
NCBI-ProteinID:
XP_066397064
LinkDB
All DBs
Position
4:complement(38507635..38523575)
Genome browser
AA seq
1915 aa
AA seq
DB search
MAPKSKRGKGKGEKKKKDEKVLPVAIDISVNLPDQSHVILKGISTDRIIDVRRLLCVNTA
TCAITNYSLTHEMRDGALKDTADIATLKPCTLTLVEEEYSEESAVEHVRRLLDIVACTTS
FGPAPPPPPPPSPKDADGAKEPSSSSATTKAAASASSGGRRTASPPPASPSSAAAKESSA
AKEAAAKESAAAAELEAEMSGACPRLGAFYEFFSLANLTPPLQFVRRVLQPRQEEQPSDD
HLFFLEAKLCSGKFIVIEARRKGFFSLGKQRVLCHNLVDLLRHLSRPFDNAYEDLMKAFL
ERNKFGNFPYGFRANTWLVPPIAAQSPSTFPPLPAEDETWGGSGGGWGRDGKSDMVPWAD
EFLYLTSMACKTAEERELRDRRAFLLHSLFVDVAIFRAIAAVRHVMESTELSASTKIDEV
LYSETVGNFSITLTRDSSDASCKLDTKIDGNRATGMDSKNLAERNLLKGITADENTAAHD
VDSLGIINLRYFGYVAVAKVDNIDKTKVNSSIKPMNIADQPEGGAHALNINSLRMLLNEA
TSTGEKKISNLLQNHRQEELIAAQTFVEKLLKESLQKLEEEENVKESFMRWELGACWVQH
LQDQKNSDKDKKQGGEKDKKKTVDKSKEPKIEGLGKPLKALKNAKNVNSADLGSSLGPKS
SAESQKDKPSDVELPQGESSASENENLLKDLLPESAFTRLKESETGLHQKSPPELIEMAL
KYYDEVALPKLVADFGSLELSPVDGRTLTDFMHTRGLQMRSLGRVVKLSEKLSHVQSLCV
HEMIVRAFKHIVRSVISAISDMRQLALTIAAALNLLLGVPESDVSGSSPNVHPLVWRWLV
TFLKRRYEFELTEKHYHDVRKYAVLRGLCHKVGIELAPGDFIMDCSFPFHKQDIISLVPV
HKQVACSSADGRQLLESSKTALDKGKLEDAVNYGTKALSKLITVCGPYHRMTAGAYSLLA
VVLYHTGDFNQATIYQQKALDINERELGLDHPDTMKSYGDLAVFYYRLQHTELALKYVKR
ALYLLHLTCGPSHPNTAATYINVAMMEEGLGNVHVALRYLHKALKCNQKLLGPDHIQTAA
SYHAIAIALSLMEAYSLSVQHEQTTLQILRAKLGPDDLRTQDAAAWLEYFESKVIEQQEA
ARNGTRKPDASIASKGHLSVSDLLDYINPDQESKGRDSESGKRRYSSIKVLSHSNESSNG
ASPEISPRHSNLIIDEEQQVTEPSKDDSTKIISEAEVKQTPESFEHPAPSELQLDIAEVN
INAPKEVIEVENSEPEDGWQPVQRPKSAGGPGKQMKHYRPTTRKVYEPDSHDPTYTSQYK
ARNSYSNNRYYFLRKRTVVPTTYTDPQQHVKVQTSGARFGRKIYKAVTYRVKPGTATTEV
LDTFKSTEQMSGKAESQVTYSQAHNPTSTDHKESESHGTLVASSGNAPSYKDVALARPGT
IAKTQIQKPRDDVPQNQPSLGQIIAQEMKDSLVDSLQVEQGPVSANTNNSKEETNVLGKL
QKLEETKFSEGELEIENLDKDRLQDLPIPKAEESGIGSEPVNSPKDANVLSQELSSSNND
GAAIEFSESTGSVKTEQTEKSDTEFFEALPHSIENISVSASTTNAGSLEGVGSEKSKPNL
VLSNIDLREMPNKKLSASAPPFNPSPSVLSPLSGNVGLPPPGAIPGVGPWPVNVSLHPGH
STMVPSGPPLCTSPHHLYPTPRSRNLMHPVSFIYPPYSQPQVVPSTTFPMNTNIFRPNHY
GWQPYMGPVPSEFVPMSSWSSSHTVDFIPTPHVVDPISQSLADKHIQSDAAVVSIGPSLD
SNAAVAKEEMETPAVVVSGNLISNKHDDQDKQLKDAIRIELSPDMQEDNRHDEGSFRIYV
KGKSRRKQTLRIPISLLNKTYGSRPFKLVYNKVVRENDIFRPSCVSFAEVVSSGN
NT seq
5748 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccaagagcaagcgtgggaagggcaagggcgagaagaagaagaaagatgagaaa
gttctccctgtcgccattgacatcagtgtgaacctcccggaccagtctcatgtcattctg
aaggggatttcaacggacaggatcatcgatgtgaggcggctgctctgcgtcaacaccgcc
acgtgtgccatcacaaactactctctcacacatgagatgcgtgatggtgccttgaaggat
accgctgacattgctacactgaaaccgtgcacgctcacgttggtggaagaggagtacagc
gaggagagcgcggtcgagcacgtccggcgtctgctggacatcgtcgcctgcaccacctcc
ttcggccccgcgccgccacctccgccgccgccgtcccccaaggacgccgatggcgccaag
gagccctccagctccagcgccaccaccaaggccgccgcatccgcctcctcgggcgggcgc
cgcactgcctcgccgccaccggcgtcgccgtcctccgccgccgcgaaggagtcgtcagcc
gcaaaggaggcagcagccaaggagtccgcggctgcggcagagctggaggccgagatgagc
ggcgcgtgcccccgcctcggcgccttctatgagttcttctcactcgccaacctcacgccg
ccactccagtttgtaaggcgagtgttgcagcctcgacaggaggagcagccttcggatgac
catctgttctttcttgaggcaaagctttgtagtgggaaattcattgttattgaagctcga
cgaaagggattcttcagtttaggaaagcagcgagtcttgtgccataacctagtcgatctt
ctgaggcatcttagtagaccatttgataatgcttatgaagatcttatgaaggcatttttg
gaacgaaacaagtttggaaattttccttatgggtttcgtgcaaatacatggcttgttcct
ccaattgctgcccagtcaccatcaacatttcctcctcttcctgctgaggatgaaacatgg
ggaggcagtggaggtggttgggggagggatggaaagagcgacatggtgccatgggcagat
gaatttctctatctcacatccatggcttgcaaaactgctgaggagagggaactccgtgac
aggagagcattcctacttcacagcctctttgtagatgttgctatctttcgggctattgca
gcagtaaggcatgtaatggaaagtacagagttatcggcatcaaccaagatagacgaagtt
ttgtattctgagacagtgggaaattttagcatcactctcacaagagattcttcagatgca
agctgcaagttggacactaagatagatggaaacagagccacaggaatggactctaagaat
cttgcggaaaggaaccttttgaaaggaataactgcggatgaaaacacagctgcccatgat
gttgacagtttgggcattatcaaccttagatattttgggtatgttgcagtagcaaaggtg
gacaatatcgacaaaaccaaagtaaactcttctatcaagcctatgaatatcgcagatcaa
cctgaagggggtgcacatgcattgaacattaacagtttgaggatgctccttaatgaagcc
acttctactggggagaagaagatatcaaaccttttacaaaatcataggcaggaagaacta
attgcggcacaaacttttgttgagaagttattgaaggaaagtcttcaaaagcttgaggaa
gaggaaaatgtaaaagagtcatttatgagatgggaacttggtgcctgctgggttcagcat
ttgcaggatcagaaaaattctgataaggataaaaagcaaggtggtgagaaggataagaag
aaaacagtggacaaatctaaagaaccaaagattgaagggctagggaagcctctcaaagct
cttaagaatgcgaaaaatgttaattctgctgacctgggttcctcattggggcccaaaagc
tctgcagaaagccagaaagacaagccatcagatgttgaattgcctcaaggagagtctagt
gcttctgagaatgaaaacctgctgaaggatttattaccagaatctgcttttacaaggttg
aaagaatctgaaactgggctccaccagaagtcaccacctgagttgattgagatggctctg
aagtactacgatgaagttgcacttcctaagctggttgctgattttggttctctggaactt
tcacctgttgacggtaggactttgactgatttcatgcataccagaggcctacagatgcgc
tctctaggacgagttgtcaagctttcagagaagctttcacatgttcagtccttatgtgtg
catgagatgatagtgcgtgctttcaagcatatcgtccgctctgtgatttctgctatttca
gacatgcgacaattagcactaacaatagctgcagcgttgaacttactgcttggtgttcct
gaatctgatgtctctggaagttctcctaatgtacatcccctagtatggagatggctggtg
accttcttgaaaaggagatatgaatttgagctcacggagaaacattaccatgatgtgagg
aaatatgctgtccttagaggactatgccataaggtgggcattgagttggcacccggagat
ttcattatggattgctctttcccattccataagcaggacattattagcctggtacctgta
cataagcaagttgcatgctcatctgcagatggtaggcaactgctagaatcctctaaaact
gcccttgacaagggtaaacttgaagatgctgtcaattatgggaccaaggctctttccaag
ctcataactgtatgtggtccctaccaccgaatgacagctggagcttatagtctgctagct
gttgttttgtaccatactggtgattttaatcaggctactatttatcagcaaaaggcccta
gacatcaacgagagggaacttggacttgaccaccctgatactatgaagagctatggagac
cttgctgtgttctactaccgtctgcaacatacagaattggccctaaagtatgtcaagcgt
gcgctatatcttctgcatcttacgtgcgggccatctcatccaaatacagctgctacatat
atcaatgtagctatgatggaagaaggattgggcaatgtgcatgtagctctaagatacttg
cacaaagctttaaaatgcaaccagaaattgcttgggcctgatcatatacagactgctgcc
agctaccatgctatagccatagctctctcattgatggaagcatattccttgagtgttcag
catgagcaaacaaccttgcaaatccttcgtgcaaagcttggaccagatgacctacgaact
caggatgctgctgcttggcttgaatactttgagtcaaaagtaattgagcaacaagaggct
gcacggaatggaactcggaaacctgacgcatcaatagctagtaaaggacacctaagtgta
tctgatcttcttgattacataaatcctgaccaagagagcaagggaagagattctgaatct
ggaaaaaggagatactcaagcataaaggttttatctcattcaaatgaaagttcaaatgga
gcaagccctgagatatctccaagacattcaaatctcattatagatgaggaacagcaagtt
acagagccatcaaaagatgacagtactaaaattatttctgaagctgaggttaaacagact
cctgaatcatttgagcatccagcaccttctgagctacaactagatatagctgaggtgaac
attaatgcacctaaggaagttattgaagttgaaaattcagaacctgaagatggttggcag
cctgttcaaagacctaaatcagctgggggtccaggaaaacagatgaagcattatcgccca
accaccagaaaggtgtatgaacctgatagtcatgatccaacatatacttcacaatacaag
gcaaggaattcctactcaaataaccggtattatttcttaaggaagagaacagttgtacct
acaacatacacagatcctcagcagcatgtgaaagtgcagacatctggtgccaggtttggt
cgcaagatttacaaggctgtgacctatcgggttaagccagggactgcaaccacggaggtg
ctagatacttttaagagtacagagcagatgagtggtaaagcagaatcccaggtaacatac
tcacaagcacacaatcctacctcaacagatcacaaagaaagtgagtcacatggaacttta
gttgcaagtagtggaaatgctccatcatacaaagatgttgcattagcacgccctggaaca
attgccaagactcaaatacagaaacctagagatgatgtaccacagaaccaaccatcactt
ggtcagattattgcacaagaaatgaaagattctttggttgattcactccaagtggagcag
ggacctgtctctgcaaataccaataattccaaagaagaaaccaatgtgctaggaaaactc
cagaaattagaagaaacaaaattctctgaaggagaactggagattgagaatctggacaaa
gacaggttacaagatttgccaataccaaaggctgaggaatctggaattggaagtgagcct
gtaaatagtccaaaagatgccaatgtgttaagtcaagaactatcaagtagtaacaatgat
ggtgcagccattgagttttctgagtccactggatctgtaaaaactgaacagactgagaag
tctgatacggaattttttgaagctctaccccacagtatagaaaatatttcagtttcagca
tctacgacaaacgcagggagtcttgaaggtgttggaagtgagaagtccaagcctaactta
gtgctaagtaatattgatttgagagagatgcctaataagaagctatctgcttctgcacca
ccatttaatccatctccatctgtacttagccccctttctggcaatgttggtctcccacca
ccaggtgccattccaggagtaggaccttggcctgtgaatgtatccctgcatcctggtcat
tcaactatggtaccaagtggtcctcctttgtgcacttctcctcatcatttgtaccctact
ccccgatctcgtaatctcatgcatcctgtgtcatttatttatccaccatatagtcaacca
caggtggttccaagcaccacatttcccatgaacactaacatttttcggcctaaccattat
ggatggcaaccttatatgggcccagtgccatcagaatttgtgccaatgtcgtcatggtca
agtagccatacagttgacttcattcccacgccacatgttgttgaccctatttctcaatct
ttagcagataaacatattcaatctgatgcagctgttgttagtataggcccttcactggac
agtaatgctgcagtggccaaggaggagatggagactcctgcagtggtagtaagtggcaat
ttgataagcaacaaacacgatgatcaagataaacaattaaaggatgccattagaattgaa
ctgagtcctgacatgcaagaagacaacaggcatgatgaaggtagtttcaggatatatgta
aaggggaaaagccgtcggaaacaaactctgagaatcccaataagtttgcttaacaagaca
tatgggtcacgcccatttaagcttgtctataacaaagtagtcagagagaatgacattttc
aggccttcctgtgtgtcatttgctgaagttgtttcatctggcaactag
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integrated database retrieval system
